RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Znf431E9QAG8 526 aa6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 P03980 138 aa6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 Phxr2P15972 65 aa6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 FusP56959 518 aaKnown RBP6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ang2Q64438 145 aa6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 Saxo2Q8BQB6 394 aa6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 Cyb5r3Q9DCN2 301 aaKnown RBP6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ms4a4bQ9ES61 226 aa6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gm10020E9QAZ2 204 aa6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 Sult1a1P52840 291 aa6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 C1qtnf9Q4ZJN1 333 aa6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 Znf329Q6GQR8 522 aa6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 Tas2r114Q7M722 309 aa6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 Dppa1Q810Y7 116 aa6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ido2Q8R0V5 405 aa6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 Rpl15Q9CZM2 204 aaKnown RBP6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 Pard6aQ9Z101 346 aa6.77□□□□□ -1.33
Trim39-201ENSMUST00000042717 Trav4-4-dv10A0A075B651 110 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Igkv1-133A0A0B4J1H8 120 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Znf474Q6V5K9 347 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Slc36a4Q8CH36 500 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Atp6v0bQ91V37 205 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Tmem100Q9CQG9 134 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Necap2Q9D1J1 266 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ccl24Q9JKC0 119 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 SelenokQ9JLJ1 94 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gm6525A0A0A6YW33 106 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Rab24P35290 203 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 SeboxP70368 190 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gm10188Q3V432 135 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Obox7Q4KL20 218 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 ParlQ5XJY4 377 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Srsf2Q62093 221 aaKnown RBP6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Mrpl18Q9CQL5 180 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Mettl26Q9DCS2 204 aa6.76□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ighv1-39A0A075B5V5 117 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gm28372A0A087WNV0 220 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ighv1-74A0A0G2JGK2 117 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 GzmfP08883 248 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Txn2P97493 166 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Tmem167bQ80X45 74 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gm12689Q8BQU9 117 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Olfr1009Q8VFK1 314 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Stard4Q99JV5 224 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Anapc16Q9CPV2 110 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Nhp2Q9CRB2 153 aaKnown RBP6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Cxcl14Q9WUQ5 99 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ighv1-67A0A0G2JFN9 117 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Amn1B8JKV0 258 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 1700056E22RikF7CNM6 234 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ssty1P13675 232 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gstp1P19157 210 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ypel4Q65Z93 127 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Onecut2Q6XBJ3 505 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Olfr1472Q7TQQ9 314 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gng5Q80SZ7 68 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 C130073F10RikQ8C4L8 201 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Olfr981Q8VEU2 310 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Slc25a2Q99ML6 265 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Rnf2Q9CQJ4 336 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Nicn1Q9CQM0 213 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Susd2Q9DBX3 820 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Mrps11Q9DCA2 191 aaKnown RBP6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Arl3Q9WUL7 182 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Vamp5Q9Z2P8 102 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 BsnO88737 3942 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Samt1A2BED8 237 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gm44501A8R0T9 150 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gm20422E9PUR3 255 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Mapk1ip1lQ8BH93 242 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Aqp11Q8BHH1 271 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Glrx2Q923X4 156 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Mrpl27Q99N92 148 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 Akap13E9Q394 2776 aa6.75□□□□□ -1.33
Trim39-201ENSMUST00000042717 4930444P10RikD3YUR1 185 aa6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 P01748 117 aa6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gm10803Q3TZS6 135 aa6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 Usmg5Q78IK2 58 aa6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 Olfr159Q9QZ19 319 aa6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 Trav7-1A0A0G2JEV5 112 aa6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gm5294J3QP53 216 aa6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 Pde6dO55057 150 aa6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 Gm10226O88253 85 aa6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 Mtco2P00405 227 aaKnown RBP6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 GchfrP99025 84 aa6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 Olfr262Q8VFV8 312 aa6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 Pth2Q91W27 100 aa6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 Mien1Q9CQ86 115 aa6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 Smdt1Q9DB10 107 aa6.74□□□□□ -1.33
Trim39-201ENSMUST00000042717 Tmem262D3Z338 116 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Irf2bp2E9Q1P8 570 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 MsmbO08540 113 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Slc25a5P51881 298 aaKnown RBP6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ypel3P61237 119 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Nutf2P61971 127 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Ang3P97802 145 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Cd84Q18PI6 329 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 RprmlQ3URD2 117 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Smug1Q6P5C5 279 aa6.73□□□□□ -1.33
Trim39-201ENSMUST00000042717 Derl1Q99J56 251 aa6.73□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 49.8 ms