RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Wbp2nlQ9D529 359 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Klk4Q9Z0M1 255 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Ypel2Q65Z95 119 aa13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Olfr1199Q8VF94 310 aa13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Card19Q9D1I2 183 aa13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Ypel1Q9ESC7 118 aa13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Trbv13-3A0A0B4J1H2 113 aa13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Phf3B2RQG2 2025 aaKnown RBP13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Atp23Q9CWQ3 201 aa13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Tax1bp3Q9DBG9 124 aa13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Gm26938S4R185 226 aa13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Gm6525A0A0A6YW33 106 aa13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Igkv6-14A0A140T8P1 115 aa13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Zfp36l2P23949 484 aaKnown RBP13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Mrpl52Q9D0Y8 121 aa13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Defb3Q9WTL0 63 aa13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Gm26727M0QWT1 121 aa13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Slurp1Q9Z0K7 110 aa13.8□□□□□ -0.2
Col17a1-201ENSMUST00000026045 AtrxQ61687 2476 aaKnown RBP13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Igkv4-91A0A075B5L2 119 aa13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Olfr1189A2AV11 306 aa13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Gm9733Q1AN91 178 aa13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Shank1D3YZU1 2167 aa13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Rbx1P62878 108 aa13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Q9CQM1 111 aa13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Slc25a15Q9WVD5 301 aa13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Ighv5-4A0A075B5P9 117 aa13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Trbv12-1A0A0B4J1H0 124 aa13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 B1ARW8 110 aa13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Foxg1Q60987 481 aa13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 F930015N05RikQ8C3A3 210 aa13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Stac2Q8R1B0 408 aa13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Zfp420Q7TMN8 578 aa13.79□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Ighv14-3A0A075B5R9 117 aa13.78□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Defa27F2Z403 93 aa13.78□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Mbd6Q3TY92 1003 aa13.78□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Olfr1373Q7TQT6 311 aa13.78□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Pf4Q9Z126 105 aa13.78□□□□□ -0.2
Col17a1-201ENSMUST00000026045 ApomQ9Z1R3 190 aa13.78□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Mpv17P19258 176 aa13.78□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Hs3st3b1Q9QZS6 390 aa13.78□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Igkv4-50A0A0B4J1J0 117 aa13.78□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Mob4Q6PEB6 225 aa13.78□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Mob3bQ8VE04 216 aa13.78□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Hcfc2Q9D968 241 aa13.78□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Defa21Q8C1P2 93 aa13.78□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Gm10283Q8C3L5 117 aa13.78□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Ighv5-6A0A075B5Q0 117 aa13.77□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Ighv14-2A0A075B5R7 117 aa13.77□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Gm43517E9PYS1 339 aa13.77□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Ccl11P48298 97 aa13.77□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Tac3P55099 116 aa13.77□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Gm20219A0A1B0GRQ3 87 aa13.77□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Gm10020E9QAZ2 204 aa13.77□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Gm19345G3UYD9 124 aa13.77□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Olfr553Q7TRS6 326 aa13.77□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Rpl15Q9CZM2 204 aaKnown RBP13.77□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Trav12-3A0A075B648 115 aa13.77□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Trav6d-7A0A075B6B0 112 aa13.77□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Eid2bE9Q2Y0 151 aa13.77□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Asphd1Q2TA57 360 aa13.77□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Zfp248Q640N4 576 aa13.77□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Ly6g5bQ8K1T4 194 aa13.77□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Obox1Q9D350 204 aa13.77□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Slc25a29Q8BL03 306 aa13.77□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Ndufb3Q9CQZ6 104 aa13.77□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Trav14n-3A0A075B645 120 aa13.77□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Gm45871A0A1B0GRI9 540 aa13.77□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Ca1P13634 261 aa13.77□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Dmrtc1c1Q9D410 238 aa13.77□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Dctn5Q9QZB9 182 aa13.77□□□□□ -0.21
Col17a1-201ENSMUST00000026045 9830107B12RikD3Z5D6 160 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Gm21789J3QMZ1 123 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Gm21870J3QPN2 123 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Gm21883J3QPV3 123 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Csrp2P97314 193 aaKnown RBP13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Gemin7Q9CWY4 129 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Tmem219Q9D123 240 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Lgals6O54891 301 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Pax8Q00288 457 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Tmem129Q8K304 362 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Klk10Q99M20 278 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Trav6n-6A0A075B6B2 114 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 H2al2bA9Z055 111 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 P18528 98 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 ElnP54320 860 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 PcolceQ61398 468 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 PdpnQ62011 172 aa13.76□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Zfp951A0A087WRH0 451 aa13.75□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Pkd1l3Q2EG98 2201 aa13.75□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Ccl2P10148 148 aa13.75□□□□□ -0.21
Col17a1-201ENSMUST00000026045 9130213A22RikQ3V3T2 120 aa13.75□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Tal2Q62282 108 aa13.75□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Olfr491Q8VG06 310 aa13.75□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Obsl1D3YYU8 1804 aaKnown RBP13.75□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Ighv7-3A0A075B5R2 120 aa13.75□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Id3P41133 119 aa13.75□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Slc25a39Q9D8K8 359 aa13.75□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Arid1bE9Q4N7 2244 aa13.75□□□□□ -0.21
Col17a1-201ENSMUST00000026045 Ccl25O35903 144 aa13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 63.7 ms