RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Timm21Q8CCM6 249 aa8.86□□□□□ -0.99
Msh3-201ENSMUST00000022220 PerpQ9JK95 193 aa8.86□□□□□ -0.99
Msh3-201ENSMUST00000022220 Tstd1E9PY03 133 aa8.86□□□□□ -0.99
Msh3-201ENSMUST00000022220 P01660 111 aa8.86□□□□□ -0.99
Msh3-201ENSMUST00000022220 P01788 123 aa8.86□□□□□ -0.99
Msh3-201ENSMUST00000022220 Atp5g2P56383 146 aa8.86□□□□□ -0.99
Msh3-201ENSMUST00000022220 Olfr996Q7TRA0 314 aa8.86□□□□□ -0.99
Msh3-201ENSMUST00000022220 MturnQ8CGA4 131 aa8.86□□□□□ -0.99
Msh3-201ENSMUST00000022220 Leprotl1Q9CQ74 131 aa8.86□□□□□ -0.99
Msh3-201ENSMUST00000022220 C2cd3Q52KB6 2323 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 LtaP09225 202 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 Gm12253Q5NC48 229 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 OstcQ78XF5 149 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 Tmem97Q8VD00 176 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 Igkv4-80A0A075B5L7 116 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 Trbv13-3A0A0B4J1H2 113 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 Tnfrsf9P20334 256 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 Bsph2Q0Q236 131 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 Slc25a48Q8BW66 306 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 VsirQ9D659 308 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 Eml6Q5SQM0 1958 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 Ins1P01325 108 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 P01787 123 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 Cox7a2lQ61387 111 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 Olfr1012Q8VFJ7 311 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 CstadQ9D245 104 aa8.85□□□□□ -0.99
Msh3-201ENSMUST00000022220 Ighv1-18A0A0A6YXN4 117 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 P01728 117 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Srp14P16254 110 aaKnown RBP8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Zic3Q62521 466 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Olfr958Q8VEY3 312 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Olfr810Q8VFH9 312 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Ighv1-37A0A0A6YW32 117 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Gm37388A0A0A6YY46 143 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Trbv19A0A0B4J1H4 117 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Tmem238A9JSM3 176 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Inafm1E9PV59 130 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Gm21900J3QP38 180 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Cox6a1P43024 111 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 SeleQ00690 612 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 AsipQ03288 131 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Gm21974F6W3F3 119 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 NrgnP60761 78 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Zfp420Q7TMN8 578 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Znf672Q99LH4 468 aa8.84□□□□□ -0.99
Msh3-201ENSMUST00000022220 Arhgef17Q80U35 2057 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Unc79Q0KK59 2596 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 BptfA2A654 3036 aaKnown RBP8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Ighv8-6A0A0A6YXA3 118 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Foxc2Q61850 494 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Trpt1Q8K3A2 249 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Q9CR34 168 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Lsm4Q9QXA5 137 aaKnown RBP8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Olfr1024A2ASU7 327 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Lce6aD3YV94 81 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 SlpiP97430 131 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 EpopQ7TNS8 369 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Ndufa11Q9D8B4 141 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Timm23Q9WTQ8 209 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Tanc2A2A690 1994 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Ighv9-1A0A0B4J1P3 117 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Gm17727E9Q4V7 109 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Gm5426J3QNM7 103 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Gm27021M0QWE2 156 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 P01789 122 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Wnt2P21552 360 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Fbln7Q501P1 440 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Olfr1419Q7TQS2 343 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Wipf1Q8K1I7 493 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Olfr1431Q8VF59 312 aa8.83□□□□□ -1
Msh3-201ENSMUST00000022220 Ighv1-7A0A075B5T7 117 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Gm45623A0A1B0GSF6 103 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Gm16442D3YZG3 307 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Gm20825J3QM67 227 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 HrkP62816 92 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Ssty2Q149W4 227 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Gm21394Q497R7 227 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Gm20854Q62461 227 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Slc17a9Q8VCL5 447 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Gm21732J3QM79 361 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Gm21921J3QNB5 361 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Tpsab1Q02844 273 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 SrstQ06666 185 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 YrdcQ3U5F4 280 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Bpifa5Q9CQX3 270 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 ChodlQ9CXM0 273 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 EppinQ9DA01 134 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Sp5Q9JHX2 398 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 G6pc2Q9Z186 355 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Arid1bE9Q4N7 2244 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Mfge8P21956 463 aaKnown RBP8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Klf14Q19A41 325 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Bsph1Q3UW26 133 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 NotoQ5TIS6 240 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Prr23a3Q9CWP9 254 aa8.82□□□□□ -1
Msh3-201ENSMUST00000022220 Trav7n-4A0A075B620 113 aa8.81□□□□□ -1
Msh3-201ENSMUST00000022220 BC030500E9Q6W0 185 aa8.81□□□□□ -1
Msh3-201ENSMUST00000022220 Htr1dQ61224 374 aa8.81□□□□□ -1
Msh3-201ENSMUST00000022220 Olfr1178Q7TR20 323 aa8.81□□□□□ -1
Msh3-201ENSMUST00000022220 Mrpl16Q99N93 251 aa8.81□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms