RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 IGLV10-54A0A075B6I4 117 aa11.65□□□□□ -0.54
PHGDH-229ENST00000641891 ANGP03950 147 aaKnown RBP11.65□□□□□ -0.54
PHGDH-229ENST00000641891 NTN5Q8WTR8 489 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-229ENST00000641891 C6orf226Q5I0X4 101 aa11.64□□□□□ -0.55
PHGDH-229ENST00000641891 SHISA2Q6UWI4 295 aa11.64□□□□□ -0.55
PHGDH-229ENST00000641891 C2orf82Q6UX34 121 aa11.64□□□□□ -0.55
PHGDH-229ENST00000641891 IGKV2-28A0A075B6P5 120 aa11.63□□□□□ -0.55
PHGDH-229ENST00000641891 IBA57-AS1B1ANH7 110 aa11.63□□□□□ -0.55
PHGDH-229ENST00000641891 IGKV2D-28P01615 120 aa11.63□□□□□ -0.55
PHGDH-229ENST00000641891 SND1-IT1Q9HBX3 110 aa11.63□□□□□ -0.55
PHGDH-229ENST00000641891 CCL18P55774 89 aa11.62□□□□□ -0.55
PHGDH-229ENST00000641891 SIGMAR1Q99720 223 aa11.62□□□□□ -0.55
PHGDH-229ENST00000641891 CDIP1Q9H305 208 aa11.62□□□□□ -0.55
PHGDH-229ENST00000641891 PPDPFQ9H3Y8 114 aa11.62□□□□□ -0.55
PHGDH-229ENST00000641891 REG3AQ06141 175 aa11.62□□□□□ -0.55
PHGDH-229ENST00000641891 MRPL23Q16540 153 aaKnown RBP11.62□□□□□ -0.55
PHGDH-229ENST00000641891 LINC00337Q8N6G1 96 aa11.62□□□□□ -0.55
PHGDH-229ENST00000641891 CHCHD10Q8WYQ3 142 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-229ENST00000641891 COX7A2LO14548 114 aa11.61□□□□□ -0.55
PHGDH-229ENST00000641891 Q8IZM0 81 aa11.61□□□□□ -0.55
PHGDH-229ENST00000641891 TEX49A0A1B0GTD5 131 aa11.6□□□□□ -0.55
PHGDH-229ENST00000641891 LINC01600Q96MT4 127 aa11.6□□□□□ -0.55
PHGDH-229ENST00000641891 CD164L2Q6UWJ8 174 aa11.6□□□□□ -0.55
PHGDH-229ENST00000641891 CRPP02741 224 aa11.59□□□□□ -0.55
PHGDH-229ENST00000641891 LELP1Q5T871 98 aa11.58□□□□□ -0.56
PHGDH-229ENST00000641891 FBN1P35555 2871 aaKnown RBP11.58□□□□□ -0.56
PHGDH-229ENST00000641891 TRAV13-2A0A0B4J235 113 aa11.58□□□□□ -0.56
PHGDH-229ENST00000641891 H3BT86 120 aa11.57□□□□□ -0.56
PHGDH-229ENST00000641891 KIAA0087Q14695 138 aa11.57□□□□□ -0.56
PHGDH-229ENST00000641891 LINC01561Q8N1V8 128 aa11.57□□□□□ -0.56
PHGDH-229ENST00000641891 UBE2WQ96B02 151 aa11.57□□□□□ -0.56
PHGDH-229ENST00000641891 FAM218AQ96MZ4 157 aa11.57□□□□□ -0.56
PHGDH-229ENST00000641891 CKS1BP61024 79 aa11.55□□□□□ -0.56
PHGDH-229ENST00000641891 C3orf56Q8N813 242 aa11.55□□□□□ -0.56
PHGDH-229ENST00000641891 MALP21145 153 aa11.55□□□□□ -0.56
PHGDH-229ENST00000641891 KLK12Q9UKR0 248 aa11.54□□□□□ -0.56
PHGDH-229ENST00000641891 CMYA5Q8N3K9 4069 aa11.54□□□□□ -0.56
PHGDH-229ENST00000641891 RPL28P46779 137 aaKnown RBP11.54□□□□□ -0.56
PHGDH-229ENST00000641891 EGFEM1PQ0D2K5 195 aa11.54□□□□□ -0.56
PHGDH-229ENST00000641891 LYPD5Q6UWN5 251 aa11.54□□□□□ -0.56
PHGDH-229ENST00000641891 SMIM11BQ8TCY0 68 aa11.54□□□□□ -0.56
PHGDH-229ENST00000641891 XGP55808 180 aa11.53□□□□□ -0.56
PHGDH-229ENST00000641891 CFAP161Q6P656 301 aa11.53□□□□□ -0.56
PHGDH-229ENST00000641891 MT-ATP8P03928 68 aa11.52□□□□□ -0.56
PHGDH-229ENST00000641891 C9orf116Q5BN46 136 aaPredicted RBP11.52□□□□□ -0.56
PHGDH-229ENST00000641891 ANK2Q01484 3957 aa11.52□□□□□ -0.57
PHGDH-229ENST00000641891 Q6ZTC4 211 aa11.52□□□□□ -0.57
PHGDH-229ENST00000641891 TRAV8-4A0A0B4J246 113 aa11.51□□□□□ -0.57
PHGDH-229ENST00000641891 FLNBO75369 2602 aaKnown RBP11.51□□□□□ -0.57
PHGDH-229ENST00000641891 ENHOQ6UWT2 76 aa11.51□□□□□ -0.57
PHGDH-229ENST00000641891 LINC00526Q96FQ7 95 aa11.51□□□□□ -0.57
PHGDH-229ENST00000641891 C6orf223Q8N319 242 aa11.5□□□□□ -0.57
PHGDH-229ENST00000641891 PRR34Q9NV39 138 aa11.5□□□□□ -0.57
PHGDH-229ENST00000641891 KPRPQ5T749 579 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-229ENST00000641891 OR13C6PQ8NH95 151 aa11.5□□□□□ -0.57
PHGDH-229ENST00000641891 PRR3P79522 188 aaKnown RBP11.49□□□□□ -0.57
PHGDH-229ENST00000641891 PKD1L1Q8TDX9 2849 aa11.49□□□□□ -0.57
PHGDH-229ENST00000641891 TRACP01848 142 aa11.48□□□□□ -0.57
PHGDH-229ENST00000641891 Q9HAA7 133 aa11.48□□□□□ -0.57
PHGDH-229ENST00000641891 CXCL5P42830 114 aa11.48□□□□□ -0.57
PHGDH-229ENST00000641891 C10orf25Q5T742 122 aa11.48□□□□□ -0.57
PHGDH-229ENST00000641891 WFDC10BQ8IUB3 73 aa11.48□□□□□ -0.57
PHGDH-229ENST00000641891 A0A087WYN8 130 aa11.47□□□□□ -0.57
PHGDH-229ENST00000641891 SPAG11BQ08648 103 aa11.47□□□□□ -0.57
PHGDH-229ENST00000641891 A0A0J9YWU9 116 aa11.47□□□□□ -0.57
PHGDH-229ENST00000641891 STAB1Q9NY15 2570 aa11.47□□□□□ -0.57
PHGDH-229ENST00000641891 UNQ6190/PRO20217Q6UXQ8 127 aa11.46□□□□□ -0.57
PHGDH-229ENST00000641891 BAALC-AS2P0C853 105 aa11.45□□□□□ -0.58
PHGDH-229ENST00000641891 SCGB1A1P11684 91 aa11.45□□□□□ -0.58
PHGDH-229ENST00000641891 KLK5Q9Y337 293 aaPredicted RBP11.45□□□□□ -0.58
PHGDH-229ENST00000641891 C22orf24Q9Y442 160 aa11.45□□□□□ -0.58
PHGDH-229ENST00000641891 NANOS2P60321 138 aaKnown RBP11.45□□□□□ -0.58
PHGDH-229ENST00000641891 Q8NDZ9 215 aa11.45□□□□□ -0.58
PHGDH-229ENST00000641891 COX17Q14061 63 aa11.44□□□□□ -0.58
PHGDH-229ENST00000641891 CYSRT1A8MQ03 144 aa11.44□□□□□ -0.58
PHGDH-229ENST00000641891 DEFB121Q5J5C9 76 aa11.44□□□□□ -0.58
PHGDH-229ENST00000641891 H3BNG1 76 aa11.43□□□□□ -0.58
PHGDH-229ENST00000641891 TENM3Q9P273 2699 aa11.42□□□□□ -0.58
PHGDH-229ENST00000641891 PRB2P02812 416 aaPredicted RBP11.42□□□□□ -0.58
PHGDH-229ENST00000641891 DNAH3Q8TD57 4116 aa11.41□□□□□ -0.58
PHGDH-229ENST00000641891 ESRGQ1W209 222 aa11.41□□□□□ -0.58
PHGDH-229ENST00000641891 NCR3O14931 201 aa11.4□□□□□ -0.58
PHGDH-229ENST00000641891 H0YGX0 51 aa11.39□□□□□ -0.59
PHGDH-229ENST00000641891 LECT2O14960 151 aa11.39□□□□□ -0.59
PHGDH-229ENST00000641891 DEFB131BA0A096LNP1 70 aa11.38□□□□□ -0.59
PHGDH-229ENST00000641891 NDUFC2O95298 119 aa11.38□□□□□ -0.59
PHGDH-229ENST00000641891 C11orf45Q8TAV5 145 aa11.38□□□□□ -0.59
PHGDH-229ENST00000641891 DNAL4O96015 105 aa11.38□□□□□ -0.59
PHGDH-229ENST00000641891 SLPIP03973 132 aa11.37□□□□□ -0.59
PHGDH-229ENST00000641891 C15orf53Q8NAA6 179 aa11.37□□□□□ -0.59
PHGDH-229ENST00000641891 MAST4O15021 2626 aa11.36□□□□□ -0.59
PHGDH-229ENST00000641891 HIGD2BQ4VC39 106 aa11.36□□□□□ -0.59
PHGDH-229ENST00000641891 KRTAP26-1Q6PEX3 210 aa11.36□□□□□ -0.59
PHGDH-229ENST00000641891 C9orf129Q5T035 196 aaKnown RBP11.35□□□□□ -0.59
PHGDH-229ENST00000641891 C6orf48Q9UBA6 75 aa11.35□□□□□ -0.59
PHGDH-229ENST00000641891 TTC32Q5I0X7 151 aa11.34□□□□□ -0.59
PHGDH-229ENST00000641891 FAM240AA0A1B0GVK7 77 aa11.34□□□□□ -0.59
PHGDH-229ENST00000641891 SNCGO76070 127 aa11.33□□□□□ -0.6
PHGDH-229ENST00000641891 TMEM126AQ9H061 195 aa11.33□□□□□ -0.6
PHGDH-229ENST00000641891 BAHCC1Q9P281 2608 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms