RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 SRSF9Q13242 221 aaKnown RBP eCLIP8.88□□□□□ -0.991e-17■□□□□ 9.1
HNRNPU-229ENST00000640440 GAGE2EQ4V326 116 aa8.88□□□□□ -0.99
HNRNPU-229ENST00000640440 REG3GQ6UW15 175 aa8.88□□□□□ -0.99
HNRNPU-229ENST00000640440 C2orf82Q6UX34 121 aa8.88□□□□□ -0.99
HNRNPU-229ENST00000640440 GAGE2DQ9UEU5 116 aa8.88□□□□□ -0.99
HNRNPU-229ENST00000640440 PSORS1C2Q9UIG4 136 aa8.88□□□□□ -0.99
HNRNPU-229ENST00000640440 SCO1O75880 301 aa8.87□□□□□ -0.99
HNRNPU-229ENST00000640440 NPSP0C0P6 89 aa8.87□□□□□ -0.99
HNRNPU-229ENST00000640440 TRBV30A0A0K0K1B3 111 aa8.86□□□□□ -0.99
HNRNPU-229ENST00000640440 S100A1P23297 94 aa8.86□□□□□ -0.99
HNRNPU-229ENST00000640440 C1orf137Q5JT78 98 aa8.86□□□□□ -0.99
HNRNPU-229ENST00000640440 FAM19A5Q7Z5A7 132 aaPredicted RBP8.86□□□□□ -0.99
HNRNPU-229ENST00000640440 LINC01561Q8N1V8 128 aa8.86□□□□□ -0.99
HNRNPU-229ENST00000640440 URB1-AS1Q96HZ7 61 aa8.86□□□□□ -0.99
HNRNPU-229ENST00000640440 TRGC2P03986 189 aa8.85□□□□□ -0.99
HNRNPU-229ENST00000640440 ODF1Q14990 250 aa8.85□□□□□ -0.99
HNRNPU-229ENST00000640440 FA2HQ7L5A8 372 aa8.85□□□□□ -0.99
HNRNPU-229ENST00000640440 TOMM6Q96B49 74 aa8.85□□□□□ -0.99
HNRNPU-229ENST00000640440 PACRGQ96M98 296 aaPredicted RBP8.85□□□□□ -0.99
HNRNPU-229ENST00000640440 TOMM7Q9P0U1 55 aa8.85□□□□□ -0.99
HNRNPU-229ENST00000640440 LINC01549A6NIU2 74 aa8.84□□□□□ -0.99
HNRNPU-229ENST00000640440 ATP6V1G1O75348 118 aa8.84□□□□□ -0.99
HNRNPU-229ENST00000640440 PRSS2P07478 247 aa8.84□□□□□ -0.99
HNRNPU-229ENST00000640440 PAPPA-AS1Q5QFB9 102 aa8.84□□□□□ -0.99
HNRNPU-229ENST00000640440 TIMM17AQ99595 171 aa8.84□□□□□ -0.99
HNRNPU-229ENST00000640440 NDUFC2-KCTD14E9PQ53 114 aa8.83□□□□□ -1
HNRNPU-229ENST00000640440 LINC00614P0C842 121 aa8.83□□□□□ -1
HNRNPU-229ENST00000640440 RAB5BP61020 215 aa8.83□□□□□ -1
HNRNPU-229ENST00000640440 HERVK_113P63121 156 aa8.83□□□□□ -1
HNRNPU-229ENST00000640440 FAM19A3Q7Z5A8 133 aa8.83□□□□□ -1
HNRNPU-229ENST00000640440 UBR4Q5T4S7 5183 aa8.83□□□□□ -1
HNRNPU-229ENST00000640440 CKS1BP61024 79 aa8.82□□□□□ -1
HNRNPU-229ENST00000640440 SEC11AP67812 179 aa8.82□□□□□ -1
HNRNPU-229ENST00000640440 KRTAP11-1Q8IUC1 163 aa8.82□□□□□ -1
HNRNPU-229ENST00000640440 KRTAP7-1Q8IUC3 87 aa8.82□□□□□ -1
HNRNPU-229ENST00000640440 SCGB3A1Q96QR1 104 aa8.82□□□□□ -1
HNRNPU-229ENST00000640440 GEMIN7Q9H840 131 aaKnown RBP8.82□□□□□ -1
HNRNPU-229ENST00000640440 CDKN2A-AS1Q9UH64 79 aa8.82□□□□□ -1
HNRNPU-229ENST00000640440 A0A096LNJ9 63 aa8.81□□□□□ -1
HNRNPU-229ENST00000640440 M0QXV9 152 aa8.81□□□□□ -1
HNRNPU-229ENST00000640440 LORP23490 312 aaPredicted RBP8.81□□□□□ -1
HNRNPU-229ENST00000640440 KRTAP10-8P60410 259 aa8.81□□□□□ -1
HNRNPU-229ENST00000640440 C6orf226Q5I0X4 101 aa8.81□□□□□ -1
HNRNPU-229ENST00000640440 C9orf129Q5T035 196 aaKnown RBP8.81□□□□□ -1
HNRNPU-229ENST00000640440 ERASQ7Z444 233 aa8.81□□□□□ -1
HNRNPU-229ENST00000640440 Q8IZM0 81 aa8.81□□□□□ -1
HNRNPU-229ENST00000640440 IGLV7-43P04211 117 aa8.8□□□□□ -1
HNRNPU-229ENST00000640440 CHCHD1Q96BP2 118 aaKnown RBP8.8□□□□□ -1
HNRNPU-229ENST00000640440 UBE2BP63146 152 aa8.79□□□□□ -1
HNRNPU-229ENST00000640440 LINC00469Q8N7U9 141 aa8.79□□□□□ -1
HNRNPU-229ENST00000640440 LRP2P98164 4655 aa8.78□□□□□ -1
HNRNPU-229ENST00000640440 HBDP02042 147 aa8.78□□□□□ -1
HNRNPU-229ENST00000640440 PDZD11Q5EBL8 140 aa8.77□□□□□ -1.01
HNRNPU-229ENST00000640440 DIRC1Q969H9 104 aa8.77□□□□□ -1.01
HNRNPU-229ENST00000640440 F8VRH5 84 aa8.76□□□□□ -1.01
HNRNPU-229ENST00000640440 LINC00310P59036 64 aa8.76□□□□□ -1.01
HNRNPU-229ENST00000640440 PMCHL1Q16048 86 aa8.76□□□□□ -1.01
HNRNPU-229ENST00000640440 BAGE3Q86Y29 109 aa8.76□□□□□ -1.01
HNRNPU-229ENST00000640440 XAGE1AQ9HD64 81 aa8.76□□□□□ -1.01
HNRNPU-229ENST00000640440 TINCRA0A1B0GVN0 87 aa8.75□□□□□ -1.01
HNRNPU-229ENST00000640440 SMIM1B2RUZ4 78 aa8.75□□□□□ -1.01
HNRNPU-229ENST00000640440 CXCL5P42830 114 aa8.75□□□□□ -1.01
HNRNPU-229ENST00000640440 CST9LQ9H4G1 147 aa8.75□□□□□ -1.01
HNRNPU-229ENST00000640440 IGLV5-45A0A087WSX0 123 aa8.74□□□□□ -1.01
HNRNPU-229ENST00000640440 H0Y9J4 135 aa8.74□□□□□ -1.01
HNRNPU-229ENST00000640440 HIST1H2BKO60814 126 aa8.74□□□□□ -1.01
HNRNPU-229ENST00000640440 HIST1H2BJP06899 126 aa8.74□□□□□ -1.01
HNRNPU-229ENST00000640440 HIST1H2BOP23527 126 aa8.74□□□□□ -1.01
HNRNPU-229ENST00000640440 HIST1H2BBP33778 126 aa8.74□□□□□ -1.01
HNRNPU-229ENST00000640440 HIST1H2BDP58876 126 aa8.74□□□□□ -1.01
HNRNPU-229ENST00000640440 HIST1H2BCP62807 126 aa8.74□□□□□ -1.01
HNRNPU-229ENST00000640440 HIST2H2BEQ16778 126 aa8.74□□□□□ -1.01
HNRNPU-229ENST00000640440 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.74□□□□□ -1.01
HNRNPU-229ENST00000640440 COX7B2Q8TF08 81 aa8.74□□□□□ -1.01
HNRNPU-229ENST00000640440 HIST1H2BHQ93079 126 aa8.74□□□□□ -1.01
HNRNPU-229ENST00000640440 HIST1H2BNQ99877 126 aa8.74□□□□□ -1.01
HNRNPU-229ENST00000640440 HIST1H2BMQ99879 126 aa8.74□□□□□ -1.01
HNRNPU-229ENST00000640440 HSBP1O75506 76 aa8.73□□□□□ -1.01
HNRNPU-229ENST00000640440 SERF1AO75920 110 aa8.73□□□□□ -1.01
HNRNPU-229ENST00000640440 ATP5LO75964 103 aa8.73□□□□□ -1.01
HNRNPU-229ENST00000640440 SPINK8P0C7L1 97 aa8.73□□□□□ -1.01
HNRNPU-229ENST00000640440 PMVKQ15126 192 aa8.73□□□□□ -1.01
HNRNPU-229ENST00000640440 C22orf24Q9Y442 160 aa8.72□□□□□ -1.01
HNRNPU-229ENST00000640440 PRR26Q8N8Z3 221 aa8.71□□□□□ -1.02
HNRNPU-229ENST00000640440 NUPR1O60356 82 aa8.7□□□□□ -1.02
HNRNPU-229ENST00000640440 FAM19A2Q8N3H0 131 aa8.7□□□□□ -1.02
HNRNPU-229ENST00000640440 H3BRM9 83 aa8.69□□□□□ -1.02
HNRNPU-229ENST00000640440 NDUFA6P56556 154 aa8.69□□□□□ -1.02
HNRNPU-229ENST00000640440 LBHQ53QV2 105 aaPredicted RBP8.69□□□□□ -1.02
HNRNPU-229ENST00000640440 IGLC3P0DOY3 106 aa8.68□□□□□ -1.02
HNRNPU-229ENST00000640440 COA6Q5JTJ3 125 aaKnown RBP8.68□□□□□ -1.02
HNRNPU-229ENST00000640440 TRAV12-1A0A0B4J245 112 aa8.67□□□□□ -1.02
HNRNPU-229ENST00000640440 KRTAP1-4P0C5Y4 121 aa8.67□□□□□ -1.02
HNRNPU-229ENST00000640440 MRPL55Q7Z7F7 128 aaKnown RBP8.67□□□□□ -1.02
HNRNPU-229ENST00000640440 IFI27L1Q96BM0 104 aa8.67□□□□□ -1.02
HNRNPU-229ENST00000640440 TP73-AS1Q9UF72 201 aa8.67□□□□□ -1.02
HNRNPU-229ENST00000640440 IGLV1-50A0A075B6I6 118 aa8.66□□□□□ -1.02
HNRNPU-229ENST00000640440 ZNF861PO60384 105 aa8.66□□□□□ -1.02
HNRNPU-229ENST00000640440 LEPROTL1O95214 131 aa8.66□□□□□ -1.02
HNRNPU-229ENST00000640440 ZNF22P17026 224 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms