RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 MIR7-3HGQ8N6C7 128 aa6.75□□□□□ -1.33
CACNA1A-248ENST00000637774 ICOSQ9Y6W8 199 aa6.75□□□□□ -1.33
CACNA1A-248ENST00000637774 TENM3Q9P273 2699 aa6.75□□□□□ -1.33
CACNA1A-248ENST00000637774 TCL1BO95988 128 aa6.74□□□□□ -1.33
CACNA1A-248ENST00000637774 SBSPONQ8IVN8 264 aa6.74□□□□□ -1.33
CACNA1A-248ENST00000637774 Q8NAQ8 132 aa6.74□□□□□ -1.33
CACNA1A-248ENST00000637774 CSDC2Q9Y534 153 aaKnown RBP6.74□□□□□ -1.33
CACNA1A-248ENST00000637774 CRPP02741 224 aa6.74□□□□□ -1.33
CACNA1A-248ENST00000637774 Q6ZTC4 211 aa6.74□□□□□ -1.33
CACNA1A-248ENST00000637774 NDUFA1O15239 70 aa6.74□□□□□ -1.33
CACNA1A-248ENST00000637774 NANOS2P60321 138 aaKnown RBP6.74□□□□□ -1.33
CACNA1A-248ENST00000637774 REG3AQ06141 175 aa6.73□□□□□ -1.33
CACNA1A-248ENST00000637774 A0A0J9YWU9 116 aa6.73□□□□□ -1.33
CACNA1A-248ENST00000637774 LINC00308Q8TCZ7 52 aa6.72□□□□□ -1.33
CACNA1A-248ENST00000637774 CLEC2BQ92478 149 aa6.72□□□□□ -1.33
CACNA1A-248ENST00000637774 CHCHD10Q8WYQ3 142 aaPredicted RBP6.72□□□□□ -1.33
CACNA1A-248ENST00000637774 KPRPQ5T749 579 aaPredicted RBP6.71□□□□□ -1.33
CACNA1A-248ENST00000637774 PRO0461Q9UI25 63 aa6.71□□□□□ -1.33
CACNA1A-248ENST00000637774 H7C423 109 aa6.71□□□□□ -1.34
CACNA1A-248ENST00000637774 COX7A2LO14548 114 aa6.71□□□□□ -1.34
CACNA1A-248ENST00000637774 FOXI1Q12951 378 aa6.71□□□□□ -1.34
CACNA1A-248ENST00000637774 Q9HAA7 133 aa6.71□□□□□ -1.34
CACNA1A-248ENST00000637774 TRIAP1O43715 76 aa6.71□□□□□ -1.34
CACNA1A-248ENST00000637774 TRBV20-1A0A075B6N2 111 aa6.7□□□□□ -1.34
CACNA1A-248ENST00000637774 C11orf45Q8TAV5 145 aa6.7□□□□□ -1.34
CACNA1A-248ENST00000637774 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
CACNA1A-248ENST00000637774 IGHV3OR16-9A0A0B4J2B5 98 aa6.7□□□□□ -1.34
CACNA1A-248ENST00000637774 LITAFQ99732 161 aa6.7□□□□□ -1.34
CACNA1A-248ENST00000637774 IGLV5-45A0A087WSX0 123 aa6.69□□□□□ -1.34
CACNA1A-248ENST00000637774 DEFB131BA0A096LNP1 70 aa6.69□□□□□ -1.34
CACNA1A-248ENST00000637774 IGLV5-39A0A0G2JS06 123 aa6.69□□□□□ -1.34
CACNA1A-248ENST00000637774 C9orf116Q5BN46 136 aaPredicted RBP6.69□□□□□ -1.34
CACNA1A-248ENST00000637774 A0A0B4J2C4 111 aa6.69□□□□□ -1.34
CACNA1A-248ENST00000637774 IFITM1P13164 125 aa6.69□□□□□ -1.34
CACNA1A-248ENST00000637774 COPS9Q8WXC6 57 aa6.69□□□□□ -1.34
CACNA1A-248ENST00000637774 SLC25A20O43772 301 aa6.69□□□□□ -1.34
CACNA1A-248ENST00000637774 ATXN8Q156A1 80 aa6.68□□□□□ -1.34
CACNA1A-248ENST00000637774 C5orf47Q569G3 176 aa6.68□□□□□ -1.34
CACNA1A-248ENST00000637774 SPANXDQ9BXN6 97 aa6.68□□□□□ -1.34
CACNA1A-248ENST00000637774 SPANXCQ9NY87 97 aa6.68□□□□□ -1.34
CACNA1A-248ENST00000637774 STAB2Q8WWQ8 2551 aa6.68□□□□□ -1.34
CACNA1A-248ENST00000637774 SOSTDC1Q6X4U4 206 aa6.68□□□□□ -1.34
CACNA1A-248ENST00000637774 LINC00612Q8N6U2 182 aa6.68□□□□□ -1.34
CACNA1A-248ENST00000637774 A0A087WZ39 114 aa6.68□□□□□ -1.34
CACNA1A-248ENST00000637774 WFDC10BQ8IUB3 73 aa6.68□□□□□ -1.34
CACNA1A-248ENST00000637774 HIGD2BQ4VC39 106 aa6.67□□□□□ -1.34
CACNA1A-248ENST00000637774 IGKV2D-24A0A075B6R9 120 aa6.67□□□□□ -1.34
CACNA1A-248ENST00000637774 SMCPP49901 116 aaPredicted RBP6.66□□□□□ -1.34
CACNA1A-248ENST00000637774 LELP1Q5T871 98 aa6.66□□□□□ -1.34
CACNA1A-248ENST00000637774 NDUFV3P56181 108 aaKnown RBP6.66□□□□□ -1.34
CACNA1A-248ENST00000637774 PRR3P79522 188 aaKnown RBP6.66□□□□□ -1.34
CACNA1A-248ENST00000637774 SPAG11BQ08648 103 aa6.66□□□□□ -1.34
CACNA1A-248ENST00000637774 C6orf223Q8N319 242 aa6.66□□□□□ -1.34
CACNA1A-248ENST00000637774 NTN5Q8WTR8 489 aaPredicted RBP6.66□□□□□ -1.34
CACNA1A-248ENST00000637774 A0A1B0GUV1 79 aa6.66□□□□□ -1.34
CACNA1A-248ENST00000637774 LINC01620Q4KN68 170 aa6.66□□□□□ -1.34
CACNA1A-248ENST00000637774 LYPD5Q6UWN5 251 aa6.66□□□□□ -1.34
CACNA1A-248ENST00000637774 CD164L2Q6UWJ8 174 aa6.65□□□□□ -1.34
CACNA1A-248ENST00000637774 CCL18P55774 89 aa6.65□□□□□ -1.35
CACNA1A-248ENST00000637774 ANKRD29Q8N6D5 301 aa6.65□□□□□ -1.35
CACNA1A-248ENST00000637774 ZNF561-AS1K7EIQ3 104 aa6.64□□□□□ -1.35
CACNA1A-248ENST00000637774 TIMM17BO60830 172 aa6.64□□□□□ -1.35
CACNA1A-248ENST00000637774 CARD19Q96LW7 228 aa6.64□□□□□ -1.35
CACNA1A-248ENST00000637774 DNAL4O96015 105 aa6.64□□□□□ -1.35
CACNA1A-248ENST00000637774 UNQ6190/PRO20217Q6UXQ8 127 aa6.64□□□□□ -1.35
CACNA1A-248ENST00000637774 XAGE1AQ9HD64 81 aa6.63□□□□□ -1.35
CACNA1A-248ENST00000637774 S100A7L2Q5SY68 101 aa6.62□□□□□ -1.35
CACNA1A-248ENST00000637774 TRAV13-2A0A0B4J235 113 aa6.62□□□□□ -1.35
CACNA1A-248ENST00000637774 LOC107984640A0A0U1RRK4 108 aa6.62□□□□□ -1.35
CACNA1A-248ENST00000637774 IBA57-AS1B1ANH7 110 aa6.62□□□□□ -1.35
CACNA1A-248ENST00000637774 NCR3O14931 201 aa6.62□□□□□ -1.35
CACNA1A-248ENST00000637774 C1orf43Q9BWL3 253 aa6.62□□□□□ -1.35
CACNA1A-248ENST00000637774 TRBV30A0A0K0K1B3 111 aa6.61□□□□□ -1.35
CACNA1A-248ENST00000637774 ESRGQ1W209 222 aa6.61□□□□□ -1.35
CACNA1A-248ENST00000637774 TEX49A0A1B0GTD5 131 aa6.61□□□□□ -1.35
CACNA1A-248ENST00000637774 TEN1Q86WV5 123 aa6.61□□□□□ -1.35
CACNA1A-248ENST00000637774 GAGE2EQ4V326 116 aa6.61□□□□□ -1.35
CACNA1A-248ENST00000637774 LINC00337Q8N6G1 96 aa6.61□□□□□ -1.35
CACNA1A-248ENST00000637774 GAGE2DQ9UEU5 116 aa6.61□□□□□ -1.35
CACNA1A-248ENST00000637774 C10orf25Q5T742 122 aa6.6□□□□□ -1.35
CACNA1A-248ENST00000637774 PPDPFLQ8WWR9 84 aa6.6□□□□□ -1.35
CACNA1A-248ENST00000637774 CAMK2N2Q96S95 79 aa6.6□□□□□ -1.35
CACNA1A-248ENST00000637774 WIPF1O43516 503 aa6.6□□□□□ -1.35
CACNA1A-248ENST00000637774 GAGE2BQ13066 116 aa6.6□□□□□ -1.35
CACNA1A-248ENST00000637774 Q8IZM0 81 aa6.6□□□□□ -1.35
CACNA1A-248ENST00000637774 LECT2O14960 151 aa6.6□□□□□ -1.35
CACNA1A-248ENST00000637774 TTC32Q5I0X7 151 aa6.6□□□□□ -1.35
CACNA1A-248ENST00000637774 ENHOQ6UWT2 76 aa6.59□□□□□ -1.35
CACNA1A-248ENST00000637774 FAM19A3Q7Z5A8 133 aa6.59□□□□□ -1.35
CACNA1A-248ENST00000637774 EGFEM1PQ0D2K5 195 aa6.58□□□□□ -1.36
CACNA1A-248ENST00000637774 TRBV10-2A0A0K0K1G8 114 aa6.58□□□□□ -1.36
CACNA1A-248ENST00000637774 SMIM11BQ8TCY0 68 aa6.58□□□□□ -1.36
CACNA1A-248ENST00000637774 K7EIL1 84 aa6.58□□□□□ -1.36
CACNA1A-248ENST00000637774 SLPIP03973 132 aa6.58□□□□□ -1.36
CACNA1A-248ENST00000637774 RPL18AQ02543 176 aaKnown RBP6.58□□□□□ -1.36
CACNA1A-248ENST00000637774 MDFIQ99750 246 aa6.58□□□□□ -1.36
CACNA1A-248ENST00000637774 BAALC-AS2P0C853 105 aa6.57□□□□□ -1.36
CACNA1A-248ENST00000637774 UBE2DNLQ8IWF7 75 aa6.57□□□□□ -1.36
CACNA1A-248ENST00000637774 IGKV2-28A0A075B6P5 120 aa6.56□□□□□ -1.36
CACNA1A-248ENST00000637774 LST1O00453 97 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms