RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.67□□□□□ -2.14
CHRNA4-220ENST00000637628 SMIM11BQ8TCY0 68 aa1.67□□□□□ -2.14
CHRNA4-220ENST00000637628 ZCCHC13Q8WW36 166 aaKnown RBP1.67□□□□□ -2.14
CHRNA4-220ENST00000637628 MROH2AA6NES4 1674 aa1.67□□□□□ -2.14
CHRNA4-220ENST00000637628 E9PCH4 1651 aa1.67□□□□□ -2.14
CHRNA4-220ENST00000637628 PAPPA2Q9BXP8 1791 aa1.67□□□□□ -2.14
CHRNA4-220ENST00000637628 LRRC37A2A6NM11 1700 aa1.66□□□□□ -2.14
CHRNA4-220ENST00000637628 TRBV6-1A0A0K0K1D8 114 aa1.66□□□□□ -2.14
CHRNA4-220ENST00000637628 LINC01549A6NIU2 74 aa1.66□□□□□ -2.14
CHRNA4-220ENST00000637628 NCR3O14931 201 aa1.66□□□□□ -2.14
CHRNA4-220ENST00000637628 HAMPP81172 84 aa1.66□□□□□ -2.14
CHRNA4-220ENST00000637628 NREPQ16612 68 aa1.66□□□□□ -2.14
CHRNA4-220ENST00000637628 C10orf99Q6UWK7 81 aa1.66□□□□□ -2.14
CHRNA4-220ENST00000637628 BRD3OSQ6XYD6 125 aa1.66□□□□□ -2.14
CHRNA4-220ENST00000637628 Q6ZRX8 168 aa1.66□□□□□ -2.14
CHRNA4-220ENST00000637628 PLAC4Q8WY50 150 aa1.66□□□□□ -2.14
CHRNA4-220ENST00000637628 GAFA1Q96PS6 74 aa1.66□□□□□ -2.14
CHRNA4-220ENST00000637628 ZNF831Q5JPB2 1677 aa1.66□□□□□ -2.14
CHRNA4-220ENST00000637628 RICTORQ6R327 1708 aa1.66□□□□□ -2.14
CHRNA4-220ENST00000637628 ANKRD50Q9ULJ7 1429 aa1.66□□□□□ -2.14
CHRNA4-220ENST00000637628 VWDEQ8N2E2 1590 aa1.65□□□□□ -2.15
CHRNA4-220ENST00000637628 A0A1B0GU69 56 aa1.65□□□□□ -2.15
CHRNA4-220ENST00000637628 SNRPGP15A8MWD9 76 aa1.65□□□□□ -2.15
CHRNA4-220ENST00000637628 HMGA1P17096 107 aaKnown RBP1.65□□□□□ -2.15
CHRNA4-220ENST00000637628 LCE3CQ5T5A8 94 aa1.65□□□□□ -2.15
CHRNA4-220ENST00000637628 KIAA0556O60303 1618 aa1.65□□□□□ -2.15
CHRNA4-220ENST00000637628 SYCP2Q9BX26 1530 aa1.65□□□□□ -2.15
CHRNA4-220ENST00000637628 CROCC2H7BZ55 1655 aa1.64□□□□□ -2.15
CHRNA4-220ENST00000637628 SAMD9Q5K651 1589 aa1.64□□□□□ -2.15
CHRNA4-220ENST00000637628 FMN2Q9NZ56 1722 aa1.64□□□□□ -2.15
CHRNA4-220ENST00000637628 KRTAP10-12P60413 245 aa1.64□□□□□ -2.15
CHRNA4-220ENST00000637628 DEFB103AP81534 67 aa1.64□□□□□ -2.15
CHRNA4-220ENST00000637628 KRTAP13-4Q3LI77 160 aa1.64□□□□□ -2.15
CHRNA4-220ENST00000637628 LRRC7Q96NW7 1537 aa1.64□□□□□ -2.15
CHRNA4-220ENST00000637628 TOP2AP11388 1531 aaKnown RBP1.63□□□□□ -2.15
CHRNA4-220ENST00000637628 CLASP1Q7Z460 1538 aa1.63□□□□□ -2.15
CHRNA4-220ENST00000637628 SPINK13Q1W4C9 94 aa1.63□□□□□ -2.15
CHRNA4-220ENST00000637628 LCE3BQ5TA77 95 aa1.63□□□□□ -2.15
CHRNA4-220ENST00000637628 KRTAP4-8Q9BYQ9 185 aa1.63□□□□□ -2.15
CHRNA4-220ENST00000637628 ABCA1O95477 2261 aa1.63□□□□□ -2.15
CHRNA4-220ENST00000637628 CPS1P31327 1500 aa1.62□□□□□ -2.15
CHRNA4-220ENST00000637628 CACNA1CQ13936 2221 aa1.62□□□□□ -2.15
CHRNA4-220ENST00000637628 GVQW2A0A096LPI5 108 aaPredicted RBP1.62□□□□□ -2.15
CHRNA4-220ENST00000637628 G3V318 75 aa1.62□□□□□ -2.15
CHRNA4-220ENST00000637628 LINC00575Q6W349 94 aa1.62□□□□□ -2.15
CHRNA4-220ENST00000637628 MAST1Q9Y2H9 1570 aa1.62□□□□□ -2.15
CHRNA4-220ENST00000637628 NRAPQ86VF7 1730 aa1.62□□□□□ -2.15
CHRNA4-220ENST00000637628 A0A096LNT2 108 aa1.61□□□□□ -2.15
CHRNA4-220ENST00000637628 PIN1P1O15428 100 aa1.61□□□□□ -2.15
CHRNA4-220ENST00000637628 LY6G6CO95867 125 aa1.61□□□□□ -2.15
CHRNA4-220ENST00000637628 FCER1GP30273 86 aa1.61□□□□□ -2.15
CHRNA4-220ENST00000637628 KRTAP10-6P60371 365 aaPredicted RBP1.61□□□□□ -2.15
CHRNA4-220ENST00000637628 SSBP3-AS1Q7Z2R9 100 aa1.61□□□□□ -2.15
CHRNA4-220ENST00000637628 EIF2AK4Q9P2K8 1649 aaKnown RBP1.61□□□□□ -2.15
CHRNA4-220ENST00000637628 PLXNB2O15031 1838 aa1.61□□□□□ -2.15
CHRNA4-220ENST00000637628 F5P12259 2224 aa1.6□□□□□ -2.15
CHRNA4-220ENST00000637628 POLR1AO95602 1720 aaPredicted RBP1.6□□□□□ -2.15
CHRNA4-220ENST00000637628 SPRR5A0A1B0GTR4 108 aa1.6□□□□□ -2.15
CHRNA4-220ENST00000637628 ENHOQ6UWT2 76 aa1.6□□□□□ -2.15
CHRNA4-220ENST00000637628 UBL5Q9BZL1 73 aa1.6□□□□□ -2.15
CHRNA4-220ENST00000637628 UGGT1Q9NYU2 1555 aa1.59□□□□□ -2.15
CHRNA4-220ENST00000637628 ANKRD36CQ5JPF3 1778 aa1.59□□□□□ -2.15
CHRNA4-220ENST00000637628 KRTAP12-2P59991 146 aa1.59□□□□□ -2.15
CHRNA4-220ENST00000637628 KRTAP10-1P60331 282 aa1.59□□□□□ -2.15
CHRNA4-220ENST00000637628 KRTAP9-2Q9BYQ4 174 aa1.59□□□□□ -2.15
CHRNA4-220ENST00000637628 SSC5DA1L4H1 1573 aa1.59□□□□□ -2.16
CHRNA4-220ENST00000637628 DOT1LQ8TEK3 1739 aa1.58□□□□□ -2.16
CHRNA4-220ENST00000637628 ASCC3Q8N3C0 2202 aaKnown RBP1.58□□□□□ -2.16
CHRNA4-220ENST00000637628 LOC100996750A0A140TA64 210 aa1.58□□□□□ -2.16
CHRNA4-220ENST00000637628 LCE6AA0A183 80 aa1.58□□□□□ -2.16
CHRNA4-220ENST00000637628 LINC00959A0A1B0GUT2 108 aa1.58□□□□□ -2.16
CHRNA4-220ENST00000637628 A0A1B0GVY2 172 aa1.58□□□□□ -2.16
CHRNA4-220ENST00000637628 PRB2P02812 416 aaPredicted RBP1.58□□□□□ -2.16
CHRNA4-220ENST00000637628 COX7BP24311 80 aa1.58□□□□□ -2.16
CHRNA4-220ENST00000637628 KRTAP10-3P60369 221 aa1.58□□□□□ -2.16
CHRNA4-220ENST00000637628 KRTAP9-8Q9BYQ0 159 aa1.58□□□□□ -2.16
CHRNA4-220ENST00000637628 KRTAP4-6Q9BYQ5 205 aa1.58□□□□□ -2.16
CHRNA4-220ENST00000637628 COL4A4P53420 1690 aaPredicted RBP1.58□□□□□ -2.16
CHRNA4-220ENST00000637628 A0A0G2JMZ2 1700 aa1.57□□□□□ -2.16
CHRNA4-220ENST00000637628 ABCC6O95255 1503 aa1.57□□□□□ -2.16
CHRNA4-220ENST00000637628 CADP27708 2225 aa1.57□□□□□ -2.16
CHRNA4-220ENST00000637628 RPL37P61927 97 aaKnown RBP1.57□□□□□ -2.16
CHRNA4-220ENST00000637628 PCOTHQ58A44 107 aa1.57□□□□□ -2.16
CHRNA4-220ENST00000637628 ERCC6L2Q5T890 1561 aa1.56□□□□□ -2.16
CHRNA4-220ENST00000637628 BIVM-ERCC5R4GMW8 1640 aa1.56□□□□□ -2.16
CHRNA4-220ENST00000637628 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.56□□□□□ -2.16
CHRNA4-220ENST00000637628 NDUFA4O00483 81 aa1.56□□□□□ -2.16
CHRNA4-220ENST00000637628 PRH1P02810 166 aa1.56□□□□□ -2.16
CHRNA4-220ENST00000637628 RPL38P63173 70 aaKnown RBP1.56□□□□□ -2.16
CHRNA4-220ENST00000637628 NCBP2-AS2Q69YL0 99 aa1.56□□□□□ -2.16
CHRNA4-220ENST00000637628 UBE2DNLQ8IWF7 75 aa1.56□□□□□ -2.16
CHRNA4-220ENST00000637628 NOTCH3Q9UM47 2321 aa1.56□□□□□ -2.16
CHRNA4-220ENST00000637628 QSER1Q2KHR3 1735 aa1.55□□□□□ -2.16
CHRNA4-220ENST00000637628 KRTAP1-3Q8IUG1 177 aa1.55□□□□□ -2.16
CHRNA4-220ENST00000637628 TOMM5Q8N4H5 51 aa1.55□□□□□ -2.16
CHRNA4-220ENST00000637628 KRTAP12-1P59990 96 aa1.54□□□□□ -2.16
CHRNA4-220ENST00000637628 NMES1Q9C002 83 aa1.54□□□□□ -2.16
CHRNA4-220ENST00000637628 ABCA5Q8WWZ7 1642 aa1.54□□□□□ -2.16
CHRNA4-220ENST00000637628 LY75O60449 1722 aa1.54□□□□□ -2.16
CHRNA4-220ENST00000637628 LRRC37AA6NMS7 1700 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms