RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SNAPINO95295 136 aa8.56□□□□□ -1.04
PNKP-228ENST00000637325 CDKN2A-AS1Q9UH64 79 aa8.56□□□□□ -1.04
PNKP-228ENST00000637325 FAM168BA1KXE4 195 aa8.55□□□□□ -1.04
PNKP-228ENST00000637325 NDUFC2-KCTD14E9PQ53 114 aa8.55□□□□□ -1.04
PNKP-228ENST00000637325 FAM19A5Q7Z5A7 132 aaPredicted RBP8.55□□□□□ -1.04
PNKP-228ENST00000637325 Q8IZM0 81 aa8.55□□□□□ -1.04
PNKP-228ENST00000637325 SVBPQ8N300 66 aa8.55□□□□□ -1.04
PNKP-228ENST00000637325 LINC00469Q8N7U9 141 aa8.55□□□□□ -1.04
PNKP-228ENST00000637325 TINCRA0A1B0GVN0 87 aa8.54□□□□□ -1.04
PNKP-228ENST00000637325 REG3GQ6UW15 175 aa8.54□□□□□ -1.04
PNKP-228ENST00000637325 PSORS1C2Q9UIG4 136 aa8.54□□□□□ -1.04
PNKP-228ENST00000637325 PMVKQ15126 192 aa8.53□□□□□ -1.04
PNKP-228ENST00000637325 C1orf137Q5JT78 98 aa8.53□□□□□ -1.04
PNKP-228ENST00000637325 CST9LQ9H4G1 147 aa8.53□□□□□ -1.04
PNKP-228ENST00000637325 TNXBP22105 4242 aa8.52□□□□□ -1.05
PNKP-228ENST00000637325 MT1HL1P0DM35 61 aa8.52□□□□□ -1.05
PNKP-228ENST00000637325 NDUFA6P56556 154 aa8.52□□□□□ -1.05
PNKP-228ENST00000637325 F8VRH5 84 aa8.51□□□□□ -1.05
PNKP-228ENST00000637325 LINC00614P0C842 121 aa8.51□□□□□ -1.05
PNKP-228ENST00000637325 CXCL5P42830 114 aa8.51□□□□□ -1.05
PNKP-228ENST00000637325 UBE2BP63146 152 aa8.51□□□□□ -1.05
PNKP-228ENST00000637325 SRSF9Q13242 221 aaKnown RBP eCLIP8.51□□□□□ -1.05
PNKP-228ENST00000637325 PDZD11Q5EBL8 140 aa8.51□□□□□ -1.05
PNKP-228ENST00000637325 C18orf32Q8TCD1 76 aa8.51□□□□□ -1.05
PNKP-228ENST00000637325 LINC01600Q96MT4 127 aa8.51□□□□□ -1.05
PNKP-228ENST00000637325 PLA2G2DQ9UNK4 145 aa8.51□□□□□ -1.05
PNKP-228ENST00000637325 SMIM1B2RUZ4 78 aa8.5□□□□□ -1.05
PNKP-228ENST00000637325 M0QXV9 152 aa8.5□□□□□ -1.05
PNKP-228ENST00000637325 RAB5BP61020 215 aa8.5□□□□□ -1.05
PNKP-228ENST00000637325 COX7B2Q8TF08 81 aa8.5□□□□□ -1.05
PNKP-228ENST00000637325 IGLV5-45A0A087WSX0 123 aa8.49□□□□□ -1.05
PNKP-228ENST00000637325 H3BRM9 83 aa8.49□□□□□ -1.05
PNKP-228ENST00000637325 HBDP02042 147 aa8.49□□□□□ -1.05
PNKP-228ENST00000637325 C9orf129Q5T035 196 aaKnown RBP8.49□□□□□ -1.05
PNKP-228ENST00000637325 SPINK8P0C7L1 97 aa8.48□□□□□ -1.05
PNKP-228ENST00000637325 PMCHL1Q16048 86 aa8.47□□□□□ -1.05
PNKP-228ENST00000637325 KRTAP7-1Q8IUC3 87 aa8.47□□□□□ -1.05
PNKP-228ENST00000637325 URB1-AS1Q96HZ7 61 aa8.47□□□□□ -1.05
PNKP-228ENST00000637325 XAGE1AQ9HD64 81 aa8.47□□□□□ -1.05
PNKP-228ENST00000637325 ATP5LO75964 103 aa8.46□□□□□ -1.06
PNKP-228ENST00000637325 IGLV7-43P04211 117 aa8.46□□□□□ -1.06
PNKP-228ENST00000637325 A0A096LNJ9 63 aa8.45□□□□□ -1.06
PNKP-228ENST00000637325 IGLC3P0DOY3 106 aa8.45□□□□□ -1.06
PNKP-228ENST00000637325 KRTAP11-1Q8IUC1 163 aa8.45□□□□□ -1.06
PNKP-228ENST00000637325 DIRC1Q969H9 104 aa8.45□□□□□ -1.06
PNKP-228ENST00000637325 HMCN2Q8NDA2 5059 aa8.45□□□□□ -1.06
PNKP-228ENST00000637325 LBHQ53QV2 105 aaPredicted RBP8.44□□□□□ -1.06
PNKP-228ENST00000637325 C22orf24Q9Y442 160 aa8.44□□□□□ -1.06
PNKP-228ENST00000637325 BAGE3Q86Y29 109 aa8.43□□□□□ -1.06
PNKP-228ENST00000637325 ZNF22P17026 224 aaPredicted RBP8.42□□□□□ -1.06
PNKP-228ENST00000637325 KRTAP10-8P60410 259 aa8.42□□□□□ -1.06
PNKP-228ENST00000637325 YPEL4Q96NS1 127 aa8.42□□□□□ -1.06
PNKP-228ENST00000637325 CHCHD1Q96BP2 118 aaKnown RBP8.41□□□□□ -1.06
PNKP-228ENST00000637325 TMEM170BQ5T4T1 132 aa8.4□□□□□ -1.06
PNKP-228ENST00000637325 MRPL55Q7Z7F7 128 aaKnown RBP8.4□□□□□ -1.06
PNKP-228ENST00000637325 CBLN2Q8IUK8 224 aa8.4□□□□□ -1.06
PNKP-228ENST00000637325 IGLV5-39A0A0G2JS06 123 aa8.39□□□□□ -1.07
PNKP-228ENST00000637325 C11orf86A6NJI1 115 aa8.39□□□□□ -1.07
PNKP-228ENST00000637325 H0Y9J4 135 aa8.39□□□□□ -1.07
PNKP-228ENST00000637325 NUPR1O60356 82 aa8.39□□□□□ -1.07
PNKP-228ENST00000637325 TP73-AS1Q9UF72 201 aa8.39□□□□□ -1.07
PNKP-228ENST00000637325 CHTOPQ9Y3Y2 248 aaKnown RBP8.39□□□□□ -1.07
PNKP-228ENST00000637325 PFN2P35080 140 aa8.38□□□□□ -1.07
PNKP-228ENST00000637325 IFI27L1Q96BM0 104 aa8.38□□□□□ -1.07
PNKP-228ENST00000637325 HSBP1O75506 76 aa8.37□□□□□ -1.07
PNKP-228ENST00000637325 ODF1Q14990 250 aa8.37□□□□□ -1.07
PNKP-228ENST00000637325 NKAPP1Q8N9T2 125 aa8.37□□□□□ -1.07
PNKP-228ENST00000637325 SLC7A5P1Q8MH63 180 aa8.36□□□□□ -1.07
PNKP-228ENST00000637325 LINC00167Q96N53 147 aa8.36□□□□□ -1.07
PNKP-228ENST00000637325 ERG28Q9UKR5 140 aa8.36□□□□□ -1.07
PNKP-228ENST00000637325 TRAV12-1A0A0B4J245 112 aa8.35□□□□□ -1.07
PNKP-228ENST00000637325 GAGE10A6NGK3 116 aa8.35□□□□□ -1.07
PNKP-228ENST00000637325 RPL37AP8A6NKH3 93 aa8.35□□□□□ -1.07
PNKP-228ENST00000637325 ZNF861PO60384 105 aa8.35□□□□□ -1.07
PNKP-228ENST00000637325 TRGC2P03986 189 aa8.35□□□□□ -1.07
PNKP-228ENST00000637325 SFTA2Q6UW10 78 aa8.35□□□□□ -1.07
PNKP-228ENST00000637325 ZNF625Q96I27 306 aaPredicted RBP8.35□□□□□ -1.07
PNKP-228ENST00000637325 FAM19A2Q8N3H0 131 aa8.34□□□□□ -1.07
PNKP-228ENST00000637325 PRR26Q8N8Z3 221 aa8.34□□□□□ -1.07
PNKP-228ENST00000637325 IGLV5-37A0A075B6J1 123 aa8.33□□□□□ -1.08
PNKP-228ENST00000637325 COX17Q14061 63 aa8.33□□□□□ -1.08
PNKP-228ENST00000637325 IGLV1-50A0A075B6I6 118 aa8.32□□□□□ -1.08
PNKP-228ENST00000637325 TMEM223A0PJW6 202 aa8.32□□□□□ -1.08
PNKP-228ENST00000637325 H0Y8G0 127 aa8.32□□□□□ -1.08
PNKP-228ENST00000637325 BCE1O60756 84 aa8.32□□□□□ -1.08
PNKP-228ENST00000637325 RPL28P46779 137 aaKnown RBP8.32□□□□□ -1.08
PNKP-228ENST00000637325 SND1-IT1Q9HBX3 110 aa8.32□□□□□ -1.08
PNKP-228ENST00000637325 LINC00158P58513 81 aa8.31□□□□□ -1.08
PNKP-228ENST00000637325 RPL24P83731 157 aaKnown RBP8.31□□□□□ -1.08
PNKP-228ENST00000637325 UBR4Q5T4S7 5183 aa8.31□□□□□ -1.08
PNKP-228ENST00000637325 LEPROTL1O95214 131 aa8.3□□□□□ -1.08
PNKP-228ENST00000637325 IGKV2-28A0A075B6P5 120 aa8.29□□□□□ -1.08
PNKP-228ENST00000637325 ATP6V1G1O75348 118 aa8.29□□□□□ -1.08
PNKP-228ENST00000637325 SCO1O75880 301 aa8.29□□□□□ -1.08
PNKP-228ENST00000637325 SERF1AO75920 110 aa8.29□□□□□ -1.08
PNKP-228ENST00000637325 IGKV2D-28P01615 120 aa8.29□□□□□ -1.08
PNKP-228ENST00000637325 KRTAP1-4P0C5Y4 121 aa8.29□□□□□ -1.08
PNKP-228ENST00000637325 UBE2AP49459 152 aa8.29□□□□□ -1.08
PNKP-228ENST00000637325 A0A0U1RRA0 63 aa8.28□□□□□ -1.08
PNKP-228ENST00000637325 VPREB1P12018 145 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms