RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 LINC00612Q8N6U2 182 aa13.05□□□□□ -0.32
CLN5-216ENST00000636780 LINC00526Q96FQ7 95 aa13.05□□□□□ -0.32
CLN5-216ENST00000636780 IFITM1P13164 125 aa13.05□□□□□ -0.32
CLN5-216ENST00000636780 CITED1Q99966 193 aa13.04□□□□□ -0.32
CLN5-216ENST00000636780 IGHV4-30-4P0DP06 118 aa13.03□□□□□ -0.32
CLN5-216ENST00000636780 DAD1P61803 113 aa13.03□□□□□ -0.32
CLN5-216ENST00000636780 PRR3P79522 188 aaKnown RBP13.03□□□□□ -0.32
CLN5-216ENST00000636780 FAM218AQ96MZ4 157 aa13.03□□□□□ -0.32
CLN5-216ENST00000636780 LINC00337Q8N6G1 96 aa13.02□□□□□ -0.32
CLN5-216ENST00000636780 COX6CP09669 75 aa13.02□□□□□ -0.33
CLN5-216ENST00000636780 C6orf226Q5I0X4 101 aa13.02□□□□□ -0.33
CLN5-216ENST00000636780 ANAPC13Q9BS18 74 aa13.02□□□□□ -0.33
CLN5-216ENST00000636780 IGKV2-28A0A075B6P5 120 aa13.01□□□□□ -0.33
CLN5-216ENST00000636780 IGKV2D-28P01615 120 aa13.01□□□□□ -0.33
CLN5-216ENST00000636780 TRBV10-2A0A0K0K1G8 114 aa13.01□□□□□ -0.33
CLN5-216ENST00000636780 ANGP03950 147 aaKnown RBP13.01□□□□□ -0.33
CLN5-216ENST00000636780 C9orf116Q5BN46 136 aaPredicted RBP13.01□□□□□ -0.33
CLN5-216ENST00000636780 A0A087WZ39 114 aa13□□□□□ -0.33
CLN5-216ENST00000636780 Q8NAQ8 132 aa13□□□□□ -0.33
CLN5-216ENST00000636780 COL6A5A8TX70 2615 aa13□□□□□ -0.33
CLN5-216ENST00000636780 LST1O00453 97 aa12.99□□□□□ -0.33
CLN5-216ENST00000636780 CCL18P55774 89 aa12.99□□□□□ -0.33
CLN5-216ENST00000636780 Q9HAA7 133 aa12.99□□□□□ -0.33
CLN5-216ENST00000636780 SND1-IT1Q9HBX3 110 aa12.99□□□□□ -0.33
CLN5-216ENST00000636780 TRAV8-4A0A0B4J246 113 aa12.97□□□□□ -0.33
CLN5-216ENST00000636780 NHLRC4P0CG21 123 aaPredicted RBP12.96□□□□□ -0.33
CLN5-216ENST00000636780 SMIM9A6NGZ8 99 aa12.96□□□□□ -0.34
CLN5-216ENST00000636780 APOC4P55056 127 aa12.96□□□□□ -0.34
CLN5-216ENST00000636780 ATP5G1P05496 136 aa12.95□□□□□ -0.34
CLN5-216ENST00000636780 SS18Q15532 418 aa12.95□□□□□ -0.34
CLN5-216ENST00000636780 KRTAP10-11P60412 298 aa12.95□□□□□ -0.34
CLN5-216ENST00000636780 LYRM9A8MSI8 78 aa12.94□□□□□ -0.34
CLN5-216ENST00000636780 C6orf223Q8N319 242 aa12.94□□□□□ -0.34
CLN5-216ENST00000636780 OR13C6PQ8NH95 151 aa12.94□□□□□ -0.34
CLN5-216ENST00000636780 CHCHD10Q8WYQ3 142 aaPredicted RBP12.93□□□□□ -0.34
CLN5-216ENST00000636780 UBE2WQ96B02 151 aa12.93□□□□□ -0.34
CLN5-216ENST00000636780 NBEAL1Q6ZS30 2694 aa12.93□□□□□ -0.34
CLN5-216ENST00000636780 COX7A2LO14548 114 aa12.92□□□□□ -0.34
CLN5-216ENST00000636780 REG3AQ06141 175 aa12.92□□□□□ -0.34
CLN5-216ENST00000636780 SMIM11BQ8TCY0 68 aa12.92□□□□□ -0.34
CLN5-216ENST00000636780 CCDC179H3BU77 68 aa12.91□□□□□ -0.34
CLN5-216ENST00000636780 CMYA5Q8N3K9 4069 aa12.91□□□□□ -0.34
CLN5-216ENST00000636780 A0A1B0GUV1 79 aa12.91□□□□□ -0.34
CLN5-216ENST00000636780 KLK12Q9UKR0 248 aa12.91□□□□□ -0.34
CLN5-216ENST00000636780 CRPP02741 224 aa12.9□□□□□ -0.34
CLN5-216ENST00000636780 PRB2P02812 416 aaPredicted RBP12.9□□□□□ -0.34
CLN5-216ENST00000636780 A0A087WYN8 130 aa12.89□□□□□ -0.35
CLN5-216ENST00000636780 C10orf25Q5T742 122 aa12.89□□□□□ -0.35
CLN5-216ENST00000636780 SLPIP03973 132 aa12.88□□□□□ -0.35
CLN5-216ENST00000636780 SPART-AS1P0CW21 52 aa12.88□□□□□ -0.35
CLN5-216ENST00000636780 C9orf129Q5T035 196 aaKnown RBP12.88□□□□□ -0.35
CLN5-216ENST00000636780 Q8NDZ9 215 aa12.88□□□□□ -0.35
CLN5-216ENST00000636780 WFDC9Q8NEX5 89 aa12.88□□□□□ -0.35
CLN5-216ENST00000636780 MALP21145 153 aa12.87□□□□□ -0.35
CLN5-216ENST00000636780 KRTAP24-1Q3LI83 254 aa12.86□□□□□ -0.35
CLN5-216ENST00000636780 TTC32Q5I0X7 151 aa12.86□□□□□ -0.35
CLN5-216ENST00000636780 IBA57-AS1B1ANH7 110 aa12.86□□□□□ -0.35
CLN5-216ENST00000636780 KIAA0087Q14695 138 aa12.86□□□□□ -0.35
CLN5-216ENST00000636780 C22orf24Q9Y442 160 aa12.86□□□□□ -0.35
CLN5-216ENST00000636780 MIFP14174 115 aa12.85□□□□□ -0.35
CLN5-216ENST00000636780 BAALC-AS2P0C853 105 aa12.85□□□□□ -0.35
CLN5-216ENST00000636780 UNQ6190/PRO20217Q6UXQ8 127 aa12.85□□□□□ -0.35
CLN5-216ENST00000636780 H3BT86 120 aa12.83□□□□□ -0.36
CLN5-216ENST00000636780 CD164L2Q6UWJ8 174 aa12.83□□□□□ -0.36
CLN5-216ENST00000636780 TRAV13-2A0A0B4J235 113 aa12.83□□□□□ -0.36
CLN5-216ENST00000636780 Q6ZTC4 211 aa12.83□□□□□ -0.36
CLN5-216ENST00000636780 MRPL23Q16540 153 aaKnown RBP12.82□□□□□ -0.36
CLN5-216ENST00000636780 COPS9Q8WXC6 57 aa12.82□□□□□ -0.36
CLN5-216ENST00000636780 WFDC10BQ8IUB3 73 aa12.82□□□□□ -0.36
CLN5-216ENST00000636780 Q8IZM0 81 aa12.82□□□□□ -0.36
CLN5-216ENST00000636780 PPDPFQ9H3Y8 114 aa12.82□□□□□ -0.36
CLN5-216ENST00000636780 M0QXV9 152 aa12.81□□□□□ -0.36
CLN5-216ENST00000636780 RPL28P46779 137 aaKnown RBP12.8□□□□□ -0.36
CLN5-216ENST00000636780 ENHOQ6UWT2 76 aa12.8□□□□□ -0.36
CLN5-216ENST00000636780 C15orf53Q8NAA6 179 aa12.8□□□□□ -0.36
CLN5-216ENST00000636780 CYSRT1A8MQ03 144 aa12.8□□□□□ -0.36
CLN5-216ENST00000636780 NCR3O14931 201 aa12.8□□□□□ -0.36
CLN5-216ENST00000636780 NDUFV3P56181 108 aaKnown RBP12.8□□□□□ -0.36
CLN5-216ENST00000636780 LYPD5Q6UWN5 251 aa12.8□□□□□ -0.36
CLN5-216ENST00000636780 LECT2O14960 151 aa12.79□□□□□ -0.36
CLN5-216ENST00000636780 MGAM2Q2M2H8 2515 aa12.77□□□□□ -0.37
CLN5-216ENST00000636780 NANOS2P60321 138 aaKnown RBP12.77□□□□□ -0.37
CLN5-216ENST00000636780 KPRPQ5T749 579 aaPredicted RBP12.76□□□□□ -0.37
CLN5-216ENST00000636780 LELP1Q5T871 98 aa12.76□□□□□ -0.37
CLN5-216ENST00000636780 C3orf56Q8N813 242 aa12.76□□□□□ -0.37
CLN5-216ENST00000636780 HIGD2BQ4VC39 106 aa12.75□□□□□ -0.37
CLN5-216ENST00000636780 SPAG11BQ08648 103 aa12.75□□□□□ -0.37
CLN5-216ENST00000636780 LINC01600Q96MT4 127 aa12.75□□□□□ -0.37
CLN5-216ENST00000636780 A0A0J9YWU9 116 aa12.74□□□□□ -0.37
CLN5-216ENST00000636780 XAGE1AQ9HD64 81 aa12.74□□□□□ -0.37
CLN5-216ENST00000636780 SNCGO76070 127 aa12.74□□□□□ -0.37
CLN5-216ENST00000636780 TRACP01848 142 aa12.73□□□□□ -0.37
CLN5-216ENST00000636780 LYSTQ99698 3801 aa12.72□□□□□ -0.37
CLN5-216ENST00000636780 SMCR5Q8TEV8 140 aa12.72□□□□□ -0.37
CLN5-216ENST00000636780 GAGE2BQ13066 116 aa12.71□□□□□ -0.37
CLN5-216ENST00000636780 GAGE2EQ4V326 116 aa12.71□□□□□ -0.37
CLN5-216ENST00000636780 C14orf132Q9NPU4 83 aa12.71□□□□□ -0.37
CLN5-216ENST00000636780 GAGE2DQ9UEU5 116 aa12.71□□□□□ -0.37
CLN5-216ENST00000636780 DNAL4O96015 105 aa12.71□□□□□ -0.38
CLN5-216ENST00000636780 MRAPQ8TCY5 172 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms