RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 PRR9Q5T870 116 aa4.85□□□□□ -1.63
SMARCA2-243ENST00000635590 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
SMARCA2-243ENST00000635590 MIR7-3HGQ8N6C7 128 aa4.85□□□□□ -1.63
SMARCA2-243ENST00000635590 CCL19Q99731 98 aa4.85□□□□□ -1.63
SMARCA2-243ENST00000635590 NDUFA4O00483 81 aa4.84□□□□□ -1.63
SMARCA2-243ENST00000635590 DAND5Q8N907 189 aa4.84□□□□□ -1.63
SMARCA2-243ENST00000635590 ZNF815PA8K554 130 aa4.83□□□□□ -1.64
SMARCA2-243ENST00000635590 LYRM7Q5U5X0 104 aa4.83□□□□□ -1.64
SMARCA2-243ENST00000635590 ZFAND2AQ8N6M9 145 aa4.83□□□□□ -1.64
SMARCA2-243ENST00000635590 PRADC1Q9BSG0 188 aa4.83□□□□□ -1.64
SMARCA2-243ENST00000635590 H3BMG7 143 aa4.83□□□□□ -1.64
SMARCA2-243ENST00000635590 RNASE4P34096 147 aaKnown RBP4.83□□□□□ -1.64
SMARCA2-243ENST00000635590 WFDC2Q14508 124 aa4.83□□□□□ -1.64
SMARCA2-243ENST00000635590 Q6ZQT7 251 aa4.83□□□□□ -1.64
SMARCA2-243ENST00000635590 RPL39LQ96EH5 51 aaKnown RBP4.83□□□□□ -1.64
SMARCA2-243ENST00000635590 LINC00588Q9Y4M8 146 aa4.83□□□□□ -1.64
SMARCA2-243ENST00000635590 A6NED7 52 aa4.82□□□□□ -1.64
SMARCA2-243ENST00000635590 H3BUA1 57 aa4.82□□□□□ -1.64
SMARCA2-243ENST00000635590 Q6ZTC4 211 aa4.82□□□□□ -1.64
SMARCA2-243ENST00000635590 USMG5Q96IX5 58 aa4.82□□□□□ -1.64
SMARCA2-243ENST00000635590 BPESC1Q9GZL8 116 aa4.82□□□□□ -1.64
SMARCA2-243ENST00000635590 MRPL16Q9NX20 251 aaKnown RBP4.82□□□□□ -1.64
SMARCA2-243ENST00000635590 ANK3Q12955 4377 aaKnown RBP4.82□□□□□ -1.64
SMARCA2-243ENST00000635590 AGRNO00468 2067 aa4.82□□□□□ -1.64
SMARCA2-243ENST00000635590 AZU1P20160 251 aa4.81□□□□□ -1.64
SMARCA2-243ENST00000635590 Q5W150 140 aa4.81□□□□□ -1.64
SMARCA2-243ENST00000635590 TMEM141Q96I45 108 aa4.81□□□□□ -1.64
SMARCA2-243ENST00000635590 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.81□□□□□ -1.64
SMARCA2-243ENST00000635590 IGHV1-69P01742 117 aa4.81□□□□□ -1.64
SMARCA2-243ENST00000635590 RPS28P62857 69 aaKnown RBP4.81□□□□□ -1.64
SMARCA2-243ENST00000635590 ETDBQ3ZM63 59 aa4.81□□□□□ -1.64
SMARCA2-243ENST00000635590 AMTNQ6UX39 209 aa4.81□□□□□ -1.64
SMARCA2-243ENST00000635590 ATP6V0E2Q8NHE4 81 aa4.81□□□□□ -1.64
SMARCA2-243ENST00000635590 KRTAP4-12Q9BQ66 201 aa4.81□□□□□ -1.64
SMARCA2-243ENST00000635590 PRO0461Q9UI25 63 aa4.81□□□□□ -1.64
SMARCA2-243ENST00000635590 KLK5Q9Y337 293 aaPredicted RBP4.81□□□□□ -1.64
SMARCA2-243ENST00000635590 GNRH2O43555 120 aa4.8□□□□□ -1.64
SMARCA2-243ENST00000635590 RNASE3P12724 160 aaKnown RBP4.8□□□□□ -1.64
SMARCA2-243ENST00000635590 UBE2D1P51668 147 aa4.8□□□□□ -1.64
SMARCA2-243ENST00000635590 TSPEAR-AS2P59090 65 aa4.8□□□□□ -1.64
SMARCA2-243ENST00000635590 SH2D6Q7Z4S9 175 aa4.8□□□□□ -1.64
SMARCA2-243ENST00000635590 TM2D3Q9BRN9 247 aa4.8□□□□□ -1.64
SMARCA2-243ENST00000635590 LOC107984156A0A0G2JMH3 177 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 C11orf86A6NJI1 115 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 PANO1I0J062 215 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 J3KT08 172 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 ZFP2Q6ZN57 461 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 ARL17AQ8IVW1 177 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 SPANXA2-OT1Q8N9U9 137 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 RHPN1-AS1Q9BWJ2 59 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 ANK2Q01484 3957 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 IGKV3-7A0A075B6H7 116 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 IGLV4-69A0A075B6H9 119 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 DEFB1P60022 68 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 IMUPQ9GZP8 106 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 SPANXCQ9NY87 97 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 KIF25-AS1Q9Y6Z4 181 aa4.79□□□□□ -1.64
SMARCA2-243ENST00000635590 WNK2Q9Y3S1 2297 aa4.78□□□□□ -1.64
SMARCA2-243ENST00000635590 TRBV20-1A0A075B6N2 111 aa4.78□□□□□ -1.64
SMARCA2-243ENST00000635590 A0A0J9YY99 117 aa4.78□□□□□ -1.64
SMARCA2-243ENST00000635590 IGIPA6NJ69 53 aa4.78□□□□□ -1.64
SMARCA2-243ENST00000635590 LGALS3P17931 250 aaKnown RBP4.78□□□□□ -1.64
SMARCA2-243ENST00000635590 LY6EQ16553 131 aa4.78□□□□□ -1.64
SMARCA2-243ENST00000635590 TMEM170BQ5T4T1 132 aa4.78□□□□□ -1.64
SMARCA2-243ENST00000635590 CFAP126Q5VTH2 177 aa4.78□□□□□ -1.64
SMARCA2-243ENST00000635590 BRD3OSQ6XYD6 125 aa4.78□□□□□ -1.64
SMARCA2-243ENST00000635590 CARD19Q96LW7 228 aa4.78□□□□□ -1.64
SMARCA2-243ENST00000635590 TMEM126AQ9H061 195 aa4.78□□□□□ -1.64
SMARCA2-243ENST00000635590 TRBV6-5A0A0K0K1A5 114 aa4.77□□□□□ -1.65
SMARCA2-243ENST00000635590 A0A1B0GW54 56 aa4.77□□□□□ -1.65
SMARCA2-243ENST00000635590 A0A1B0GX51 115 aa4.77□□□□□ -1.65
SMARCA2-243ENST00000635590 SDHAF1A6NFY7 115 aa4.77□□□□□ -1.65
SMARCA2-243ENST00000635590 H3BMM0 161 aa4.77□□□□□ -1.65
SMARCA2-243ENST00000635590 H3BUX3 64 aa4.77□□□□□ -1.65
SMARCA2-243ENST00000635590 POLR2KP53803 58 aaKnown RBP4.77□□□□□ -1.65
SMARCA2-243ENST00000635590 LINC00315P59091 139 aa4.77□□□□□ -1.65
SMARCA2-243ENST00000635590 UBE2D3P61077 147 aa4.77□□□□□ -1.65
SMARCA2-243ENST00000635590 UBE2D2P62837 147 aa4.77□□□□□ -1.65
SMARCA2-243ENST00000635590 RHOHQ15669 191 aa4.77□□□□□ -1.65
SMARCA2-243ENST00000635590 UBE2WQ96B02 151 aa4.77□□□□□ -1.65
SMARCA2-243ENST00000635590 ODF3Q96PU9 254 aa4.77□□□□□ -1.65
SMARCA2-243ENST00000635590 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.77□□□□□ -1.65
SMARCA2-243ENST00000635590 TRBV27A0A0K0K1C4 114 aa4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 LECT2O14960 151 aa4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 IGHV3-30-3P0DP02 117 aa4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 RPL39P62891 51 aaKnown RBP4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 ZNF56Q15929 161 aa4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 KTN1-AS1Q86SY8 53 aa4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 NDUFA11Q86Y39 141 aa4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 ZNF418Q8TF45 676 aaPredicted RBP4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 PPDPFLQ8WWR9 84 aa4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 TRAV12-3A0A0B4J271 114 aa4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 A8MWV9 139 aa4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 J3QQQ9 107 aa4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 UBE2L6O14933 153 aa4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 SLC25A20O43772 301 aa4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 ZNF73O43830 326 aaPredicted RBP4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 IGHV3-30P01768 117 aa4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 PRM2P04554 102 aa4.76□□□□□ -1.65
SMARCA2-243ENST00000635590 IGHV3-30-5P0DP03 117 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms