RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 SMAGPQ0VAQ4 97 aa9.8□□□□□ -0.84
LINC00339-208ENST00000634934 FOXI1Q12951 378 aa9.8□□□□□ -0.84
LINC00339-208ENST00000634934 PPDPFQ9H3Y8 114 aa9.8□□□□□ -0.84
LINC00339-208ENST00000634934 IGHV1-58A0A0C4DH39 117 aa9.79□□□□□ -0.84
LINC00339-208ENST00000634934 ANGP03950 147 aaKnown RBP9.79□□□□□ -0.84
LINC00339-208ENST00000634934 UBE2D4Q9Y2X8 147 aa9.79□□□□□ -0.84
LINC00339-208ENST00000634934 IGLV4-60A0A075B6I1 120 aa9.78□□□□□ -0.84
LINC00339-208ENST00000634934 A0A1B0GUV1 79 aa9.78□□□□□ -0.84
LINC00339-208ENST00000634934 APOMO95445 188 aa9.78□□□□□ -0.84
LINC00339-208ENST00000634934 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
LINC00339-208ENST00000634934 TEN1Q86WV5 123 aa9.78□□□□□ -0.84
LINC00339-208ENST00000634934 PPDPFLQ8WWR9 84 aa9.78□□□□□ -0.84
LINC00339-208ENST00000634934 KLK12Q9UKR0 248 aa9.78□□□□□ -0.84
LINC00339-208ENST00000634934 A0A0J9YXV3 536 aa9.77□□□□□ -0.84
LINC00339-208ENST00000634934 CSDC2Q9Y534 153 aaKnown RBP9.77□□□□□ -0.84
LINC00339-208ENST00000634934 M0R2N4 97 aa9.77□□□□□ -0.85
LINC00339-208ENST00000634934 IFITM1P13164 125 aa9.77□□□□□ -0.85
LINC00339-208ENST00000634934 LITAFQ99732 161 aa9.77□□□□□ -0.85
LINC00339-208ENST00000634934 OPRPNQ99935 248 aaPredicted RBP9.77□□□□□ -0.85
LINC00339-208ENST00000634934 TRBV30A0A0K0K1B3 111 aa9.76□□□□□ -0.85
LINC00339-208ENST00000634934 NBDYA0A0U1RRE5 68 aa9.76□□□□□ -0.85
LINC00339-208ENST00000634934 A4D1N5 150 aa9.76□□□□□ -0.85
LINC00339-208ENST00000634934 RNASE13Q5GAN3 156 aaKnown RBP9.76□□□□□ -0.85
LINC00339-208ENST00000634934 CLPSL2Q6UWE3 100 aa9.76□□□□□ -0.85
LINC00339-208ENST00000634934 LINC00269Q8N2A0 174 aa9.76□□□□□ -0.85
LINC00339-208ENST00000634934 IGKV3OR2-268A0A0C4DH90 116 aa9.75□□□□□ -0.85
LINC00339-208ENST00000634934 LOC107984156A0A0G2JMH3 177 aa9.75□□□□□ -0.85
LINC00339-208ENST00000634934 TCL1BO95988 128 aa9.75□□□□□ -0.85
LINC00339-208ENST00000634934 TTC32Q5I0X7 151 aa9.75□□□□□ -0.85
LINC00339-208ENST00000634934 Q6ZUT4 128 aa9.75□□□□□ -0.85
LINC00339-208ENST00000634934 ARL17AQ8IVW1 177 aa9.75□□□□□ -0.85
LINC00339-208ENST00000634934 CDC42SE2Q9NRR3 84 aa9.75□□□□□ -0.85
LINC00339-208ENST00000634934 ERG28Q9UKR5 140 aa9.75□□□□□ -0.85
LINC00339-208ENST00000634934 PSMB2P49721 201 aa9.74□□□□□ -0.85
LINC00339-208ENST00000634934 UBE2WQ96B02 151 aa9.74□□□□□ -0.85
LINC00339-208ENST00000634934 KRTAP1-5Q9BYS1 174 aa9.74□□□□□ -0.85
LINC00339-208ENST00000634934 CRPP02741 224 aa9.73□□□□□ -0.85
LINC00339-208ENST00000634934 MIAQ16674 131 aa9.73□□□□□ -0.85
LINC00339-208ENST00000634934 DNAH6Q9C0G6 4158 aa9.73□□□□□ -0.85
LINC00339-208ENST00000634934 IBA57-AS1B1ANH7 110 aa9.72□□□□□ -0.85
LINC00339-208ENST00000634934 REG3AQ06141 175 aa9.72□□□□□ -0.85
LINC00339-208ENST00000634934 MUSTN1Q8IVN3 82 aa9.72□□□□□ -0.85
LINC00339-208ENST00000634934 Q9HAA7 133 aa9.72□□□□□ -0.85
LINC00339-208ENST00000634934 DNAH2Q9P225 4427 aa9.72□□□□□ -0.85
LINC00339-208ENST00000634934 IGLV5-39A0A0G2JS06 123 aa9.72□□□□□ -0.85
LINC00339-208ENST00000634934 EIF4EBP3O60516 100 aaPredicted RBP9.72□□□□□ -0.85
LINC00339-208ENST00000634934 ENHOQ6UWT2 76 aa9.72□□□□□ -0.85
LINC00339-208ENST00000634934 COPS9Q8WXC6 57 aa9.72□□□□□ -0.85
LINC00339-208ENST00000634934 NDUFA1O15239 70 aa9.71□□□□□ -0.86
LINC00339-208ENST00000634934 ATXN8Q156A1 80 aa9.71□□□□□ -0.86
LINC00339-208ENST00000634934 NDUFA12Q9UI09 145 aa9.71□□□□□ -0.86
LINC00339-208ENST00000634934 TRAV8-3A0A0A6YYJ7 113 aa9.7□□□□□ -0.86
LINC00339-208ENST00000634934 TRAV13-1A0A0B4J241 112 aa9.7□□□□□ -0.86
LINC00339-208ENST00000634934 HERVK_113P63121 156 aa9.7□□□□□ -0.86
LINC00339-208ENST00000634934 Q6ZR54 194 aa9.7□□□□□ -0.86
LINC00339-208ENST00000634934 PRR34Q9NV39 138 aa9.7□□□□□ -0.86
LINC00339-208ENST00000634934 IGLV10-54A0A075B6I4 117 aa9.69□□□□□ -0.86
LINC00339-208ENST00000634934 RPL13AP40429 203 aaKnown RBP9.69□□□□□ -0.86
LINC00339-208ENST00000634934 CDIP1Q9H305 208 aa9.69□□□□□ -0.86
LINC00339-208ENST00000634934 FRAS1Q86XX4 4008 aa9.69□□□□□ -0.86
LINC00339-208ENST00000634934 SCGB1C2P0DMR2 95 aa9.68□□□□□ -0.86
LINC00339-208ENST00000634934 CARD19Q96LW7 228 aa9.68□□□□□ -0.86
LINC00339-208ENST00000634934 GEMIN7Q9H840 131 aaKnown RBP9.68□□□□□ -0.86
LINC00339-208ENST00000634934 LINC00959A0A1B0GUT2 108 aa9.67□□□□□ -0.86
LINC00339-208ENST00000634934 SLC25A20O43772 301 aa9.67□□□□□ -0.86
LINC00339-208ENST00000634934 MTURNQ8N3F0 131 aa9.67□□□□□ -0.86
LINC00339-208ENST00000634934 IGKV2D-24A0A075B6R9 120 aa9.66□□□□□ -0.86
LINC00339-208ENST00000634934 SS18Q15532 418 aa9.66□□□□□ -0.86
LINC00339-208ENST00000634934 RMI2Q96E14 147 aa9.66□□□□□ -0.86
LINC00339-208ENST00000634934 C1orf43Q9BWL3 253 aa9.66□□□□□ -0.86
LINC00339-208ENST00000634934 DNAH10Q8IVF4 4471 aa9.66□□□□□ -0.86
LINC00339-208ENST00000634934 TRAV8-4A0A0B4J246 113 aa9.66□□□□□ -0.86
LINC00339-208ENST00000634934 TRBV10-2A0A0K0K1G8 114 aa9.66□□□□□ -0.86
LINC00339-208ENST00000634934 H3BT86 120 aa9.66□□□□□ -0.86
LINC00339-208ENST00000634934 COX6CP09669 75 aa9.66□□□□□ -0.86
LINC00339-208ENST00000634934 LINC01620Q4KN68 170 aa9.66□□□□□ -0.86
LINC00339-208ENST00000634934 XCL1P47992 114 aa9.65□□□□□ -0.86
LINC00339-208ENST00000634934 CIRBPQ14011 172 aaKnown RBP9.65□□□□□ -0.86
LINC00339-208ENST00000634934 C1orf134Q5TEV5 83 aa9.65□□□□□ -0.86
LINC00339-208ENST00000634934 C6orf223Q8N319 242 aa9.65□□□□□ -0.86
LINC00339-208ENST00000634934 ANKRD29Q8N6D5 301 aa9.65□□□□□ -0.86
LINC00339-208ENST00000634934 CHCHD10Q8WYQ3 142 aaPredicted RBP9.65□□□□□ -0.86
LINC00339-208ENST00000634934 A0A1B0GV72 72 aa9.64□□□□□ -0.87
LINC00339-208ENST00000634934 HERV-K104P63124 156 aa9.64□□□□□ -0.87
LINC00339-208ENST00000634934 EPPK1P58107 5090 aaKnown RBP9.64□□□□□ -0.87
LINC00339-208ENST00000634934 ADAMTSL4-AS1Q5T5F5 129 aa9.63□□□□□ -0.87
LINC00339-208ENST00000634934 C9JAW5 83 aa9.62□□□□□ -0.87
LINC00339-208ENST00000634934 PSCAO43653 123 aa9.62□□□□□ -0.87
LINC00339-208ENST00000634934 TRIAP1O43715 76 aa9.62□□□□□ -0.87
LINC00339-208ENST00000634934 LINC00242Q5T6M2 205 aa9.62□□□□□ -0.87
LINC00339-208ENST00000634934 CDKN2A-AS1Q9UH64 79 aa9.62□□□□□ -0.87
LINC00339-208ENST00000634934 IGHV3-64A0A075B6Q5 118 aa9.61□□□□□ -0.87
LINC00339-208ENST00000634934 SPINK8P0C7L1 97 aa9.61□□□□□ -0.87
LINC00339-208ENST00000634934 FAM240AA0A1B0GVK7 77 aa9.61□□□□□ -0.87
LINC00339-208ENST00000634934 LST1O00453 97 aa9.61□□□□□ -0.87
LINC00339-208ENST00000634934 FAT2Q9NYQ8 4349 aa9.6□□□□□ -0.87
LINC00339-208ENST00000634934 Q1RN00 199 aa9.6□□□□□ -0.87
LINC00339-208ENST00000634934 KRTAP26-1Q6PEX3 210 aa9.6□□□□□ -0.87
LINC00339-208ENST00000634934 CD164L2Q6UWJ8 174 aa9.6□□□□□ -0.87
LINC00339-208ENST00000634934 ZNF625Q96I27 306 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms