RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 DIP2CQ9Y2E4 1556 aa-0.48□□□□□ -2.49
CDR1-202ENST00000625883 ARHGAP5Q13017 1502 aa-0.48□□□□□ -2.49
CDR1-202ENST00000625883 UBR4Q5T4S7 5183 aa-0.48□□□□□ -2.49
CDR1-202ENST00000625883 URB1O60287 2271 aaKnown RBP-0.48□□□□□ -2.49
CDR1-202ENST00000625883 H3BQ15 152 aa-0.48□□□□□ -2.49
CDR1-202ENST00000625883 FDCSPQ8NFU4 85 aa-0.48□□□□□ -2.49
CDR1-202ENST00000625883 MAPKBP1O60336 1514 aa-0.48□□□□□ -2.49
CDR1-202ENST00000625883 KIAA1109Q2LD37 5005 aa-0.48□□□□□ -2.49
CDR1-202ENST00000625883 SETD2Q9BYW2 2564 aaPredicted RBP-0.49□□□□□ -2.49
CDR1-202ENST00000625883 TOP2BQ02880 1626 aa-0.49□□□□□ -2.49
CDR1-202ENST00000625883 A0A1B0GWA3 101 aa-0.49□□□□□ -2.49
CDR1-202ENST00000625883 SNCAP37840 140 aa-0.49□□□□□ -2.49
CDR1-202ENST00000625883 MRPS10P82664 201 aaKnown RBP-0.49□□□□□ -2.49
CDR1-202ENST00000625883 FXYD6Q9H0Q3 95 aa-0.49□□□□□ -2.49
CDR1-202ENST00000625883 KIAA0556O60303 1618 aa-0.5□□□□□ -2.49
CDR1-202ENST00000625883 PDZD2O15018 2839 aa-0.5□□□□□ -2.49
CDR1-202ENST00000625883 C1orf167Q5SNV9 1468 aa-0.5□□□□□ -2.49
CDR1-202ENST00000625883 LRP1BQ9NZR2 4599 aa-0.5□□□□□ -2.49
CDR1-202ENST00000625883 LOC730098B7Z3J9 87 aa-0.5□□□□□ -2.49
CDR1-202ENST00000625883 MT4P47944 62 aa-0.5□□□□□ -2.49
CDR1-202ENST00000625883 C12orf57Q99622 126 aa-0.5□□□□□ -2.49
CDR1-202ENST00000625883 PRO1933Q9H354 126 aa-0.5□□□□□ -2.49
CDR1-202ENST00000625883 SPHKAPQ2M3C7 1700 aa-0.5□□□□□ -2.49
CDR1-202ENST00000625883 MRC2Q9UBG0 1479 aa-0.51□□□□□ -2.49
CDR1-202ENST00000625883 CC2D2AQ9P2K1 1620 aa-0.51□□□□□ -2.49
CDR1-202ENST00000625883 CRYM-AS1A6NIL9 109 aa-0.51□□□□□ -2.49
CDR1-202ENST00000625883 SPRR2BP35325 72 aa-0.51□□□□□ -2.49
CDR1-202ENST00000625883 NUP188Q5SRE5 1749 aa-0.51□□□□□ -2.49
CDR1-202ENST00000625883 EPPK1P58107 5090 aaKnown RBP-0.51□□□□□ -2.49
CDR1-202ENST00000625883 DNAJC13O75165 2243 aa-0.52□□□□□ -2.49
CDR1-202ENST00000625883 KRTAP19-8Q3LI54 63 aa-0.52□□□□□ -2.49
CDR1-202ENST00000625883 SAA2P0DJI9 122 aaPredicted RBP-0.53□□□□□ -2.49
CDR1-202ENST00000625883 KLK9Q2XQG4 91 aa-0.53□□□□□ -2.49
CDR1-202ENST00000625883 GTF2H5Q6ZYL4 71 aa-0.53□□□□□ -2.49
CDR1-202ENST00000625883 NBEAL1Q6ZS30 2694 aa-0.53□□□□□ -2.49
CDR1-202ENST00000625883 PKHD1P08F94 4074 aa-0.53□□□□□ -2.49
CDR1-202ENST00000625883 XRN1Q8IZH2 1706 aaKnown RBP-0.53□□□□□ -2.49
CDR1-202ENST00000625883 STAB2Q8WWQ8 2551 aa-0.54□□□□□ -2.5
CDR1-202ENST00000625883 hADV29S1A0JD25 119 aa-0.54□□□□□ -2.5
CDR1-202ENST00000625883 HSD52Q0P140 79 aa-0.54□□□□□ -2.5
CDR1-202ENST00000625883 LINC00846Q9NV44 126 aa-0.54□□□□□ -2.5
CDR1-202ENST00000625883 NF1P21359 2839 aa-0.54□□□□□ -2.5
CDR1-202ENST00000625883 LAMA5O15230 3695 aa-0.54□□□□□ -2.5
CDR1-202ENST00000625883 TMEM262E9PQX1 116 aa-0.54□□□□□ -2.5
CDR1-202ENST00000625883 NLRP1Q9C000 1473 aa-0.55□□□□□ -2.5
CDR1-202ENST00000625883 SETBP1Q9Y6X0 1596 aa-0.55□□□□□ -2.5
CDR1-202ENST00000625883 COL4A6Q14031 1691 aa-0.55□□□□□ -2.5
CDR1-202ENST00000625883 CHD1O14646 1710 aa-0.55□□□□□ -2.5
CDR1-202ENST00000625883 FMN2Q9NZ56 1722 aa-0.55□□□□□ -2.5
CDR1-202ENST00000625883 SONP18583 2426 aaKnown RBP-0.55□□□□□ -2.5
CDR1-202ENST00000625883 STARD9Q9P2P6 4700 aa-0.55□□□□□ -2.5
CDR1-202ENST00000625883 KRTDAPP60985 99 aa-0.55□□□□□ -2.5
CDR1-202ENST00000625883 DEFB105AQ8NG35 78 aa-0.55□□□□□ -2.5
CDR1-202ENST00000625883 FLGP20930 4061 aaPredicted RBP-0.55□□□□□ -2.5
CDR1-202ENST00000625883 FAM135AQ9P2D6 1515 aa-0.56□□□□□ -2.5
CDR1-202ENST00000625883 CNOT1A5YKK6 2376 aaKnown RBP-0.56□□□□□ -2.5
CDR1-202ENST00000625883 TEP1Q99973 2627 aaKnown RBP-0.56□□□□□ -2.5
CDR1-202ENST00000625883 SPINK4O60575 86 aa-0.56□□□□□ -2.5
CDR1-202ENST00000625883 A0A0G2JMZ2 1700 aa-0.56□□□□□ -2.5
CDR1-202ENST00000625883 TOPAZ1Q8N9V7 1692 aa-0.57□□□□□ -2.5
CDR1-202ENST00000625883 HIVEP1P15822 2718 aa-0.57□□□□□ -2.5
CDR1-202ENST00000625883 SYS1-DBNDD2H3BUS1 97 aa-0.57□□□□□ -2.5
CDR1-202ENST00000625883 SEC11AP67812 179 aa-0.57□□□□□ -2.5
CDR1-202ENST00000625883 CGREF1Q99674 301 aa-0.57□□□□□ -2.5
CDR1-202ENST00000625883 RNF213Q63HN8 5207 aa-0.57□□□□□ -2.5
CDR1-202ENST00000625883 ABCC5O15440 1437 aa-0.57□□□□□ -2.5
CDR1-202ENST00000625883 RYR2Q92736 4967 aa-0.57□□□□□ -2.5
CDR1-202ENST00000625883 PLEKHH2Q8IVE3 1493 aa-0.58□□□□□ -2.5
CDR1-202ENST00000625883 A0A087WVE0 104 aa-0.58□□□□□ -2.5
CDR1-202ENST00000625883 C20orf202A1L168 122 aa-0.58□□□□□ -2.5
CDR1-202ENST00000625883 MARF1Q9Y4F3 1742 aaKnown RBP-0.59□□□□□ -2.5
CDR1-202ENST00000625883 IQSEC2Q5JU85 1478 aa-0.59□□□□□ -2.5
CDR1-202ENST00000625883 NCOA3Q9Y6Q9 1424 aa-0.6□□□□□ -2.5
CDR1-202ENST00000625883 PAPPA2Q9BXP8 1791 aa-0.6□□□□□ -2.5
CDR1-202ENST00000625883 M0R2T5 61 aa-0.6□□□□□ -2.5
CDR1-202ENST00000625883 USMG5Q96IX5 58 aa-0.6□□□□□ -2.5
CDR1-202ENST00000625883 PDCD11Q14690 1871 aaKnown RBP-0.6□□□□□ -2.51
CDR1-202ENST00000625883 ABCA3Q99758 1704 aa-0.6□□□□□ -2.51
CDR1-202ENST00000625883 COX8AP10176 69 aa-0.61□□□□□ -2.51
CDR1-202ENST00000625883 SVEP1Q4LDE5 3571 aa-0.61□□□□□ -2.51
CDR1-202ENST00000625883 C7orf77A4D0Y5 90 aa-0.61□□□□□ -2.51
CDR1-202ENST00000625883 APLNQ9ULZ1 77 aa-0.61□□□□□ -2.51
CDR1-202ENST00000625883 ZFYVE16Q7Z3T8 1539 aa-0.61□□□□□ -2.51
CDR1-202ENST00000625883 TGP01266 2768 aa-0.62□□□□□ -2.51
CDR1-202ENST00000625883 EPG5Q9HCE0 2579 aa-0.62□□□□□ -2.51
CDR1-202ENST00000625883 CACFD1Q9UGQ2 172 aa-0.62□□□□□ -2.51
CDR1-202ENST00000625883 A0A0G2JND7 137 aa-0.63□□□□□ -2.51
CDR1-202ENST00000625883 A0A1B0GU69 56 aa-0.63□□□□□ -2.51
CDR1-202ENST00000625883 ASIPP42127 132 aa-0.63□□□□□ -2.51
CDR1-202ENST00000625883 CRIPTQ9P021 101 aa-0.63□□□□□ -2.51
CDR1-202ENST00000625883 USP9YO00507 2555 aaPredicted RBP-0.64□□□□□ -2.51
CDR1-202ENST00000625883 CPSF4LA6NMK7 179 aaKnown RBP-0.64□□□□□ -2.51
CDR1-202ENST00000625883 GNGT2O14610 69 aa-0.64□□□□□ -2.51
CDR1-202ENST00000625883 PCNX1Q96RV3 2341 aa-0.64□□□□□ -2.51
CDR1-202ENST00000625883 BIRC6Q9NR09 4857 aa-0.64□□□□□ -2.51
CDR1-202ENST00000625883 KNDC1Q76NI1 1749 aa-0.65□□□□□ -2.51
CDR1-202ENST00000625883 ITPR3Q14573 2671 aa-0.65□□□□□ -2.51
CDR1-202ENST00000625883 VAMP8Q9BV40 100 aa-0.65□□□□□ -2.51
CDR1-202ENST00000625883 NKTRP30414 1462 aaKnown RBP-0.65□□□□□ -2.51
CDR1-202ENST00000625883 TARBP1Q13395 1621 aaKnown RBP-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms