RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 LINC00269Q8N2A0 174 aa13.56□□□□□ -0.24
PCDHB11-202ENST00000624887 MT-ATP8P03928 68 aa13.54□□□□□ -0.24
PCDHB11-202ENST00000624887 ATXN8Q156A1 80 aa13.54□□□□□ -0.24
PCDHB11-202ENST00000624887 LELP1Q5T871 98 aa13.54□□□□□ -0.24
PCDHB11-202ENST00000624887 ANGP03950 147 aaKnown RBP13.53□□□□□ -0.24
PCDHB11-202ENST00000624887 COX6CP09669 75 aa13.53□□□□□ -0.24
PCDHB11-202ENST00000624887 RETNQ9HD89 108 aa13.53□□□□□ -0.24
PCDHB11-202ENST00000624887 IBA57-AS1B1ANH7 110 aa13.52□□□□□ -0.24
PCDHB11-202ENST00000624887 Q8N3U1 123 aa13.52□□□□□ -0.24
PCDHB11-202ENST00000624887 CMYA5Q8N3K9 4069 aa13.52□□□□□ -0.24
PCDHB11-202ENST00000624887 CD164L2Q6UWJ8 174 aa13.52□□□□□ -0.25
PCDHB11-202ENST00000624887 MIR7-3HGQ8N6C7 128 aa13.52□□□□□ -0.25
PCDHB11-202ENST00000624887 SVIPQ8NHG7 77 aa13.52□□□□□ -0.25
PCDHB11-202ENST00000624887 STAB1Q9NY15 2570 aa13.52□□□□□ -0.25
PCDHB11-202ENST00000624887 REG3AQ06141 175 aa13.51□□□□□ -0.25
PCDHB11-202ENST00000624887 C6orf226Q5I0X4 101 aa13.51□□□□□ -0.25
PCDHB11-202ENST00000624887 Q8IZM0 81 aa13.51□□□□□ -0.25
PCDHB11-202ENST00000624887 ANKRD29Q8N6D5 301 aa13.51□□□□□ -0.25
PCDHB11-202ENST00000624887 C9JAW5 83 aa13.5□□□□□ -0.25
PCDHB11-202ENST00000624887 SLC25A20O43772 301 aa13.49□□□□□ -0.25
PCDHB11-202ENST00000624887 LINC00158P58513 81 aa13.49□□□□□ -0.25
PCDHB11-202ENST00000624887 LINC01620Q4KN68 170 aa13.49□□□□□ -0.25
PCDHB11-202ENST00000624887 CHCHD10Q8WYQ3 142 aaPredicted RBP13.49□□□□□ -0.25
PCDHB11-202ENST00000624887 PKD1L1Q8TDX9 2849 aa13.48□□□□□ -0.25
PCDHB11-202ENST00000624887 COX7A2LO14548 114 aa13.47□□□□□ -0.25
PCDHB11-202ENST00000624887 C11orf68Q9H3H3 251 aaKnown RBP13.47□□□□□ -0.25
PCDHB11-202ENST00000624887 H3BNG1 76 aa13.47□□□□□ -0.25
PCDHB11-202ENST00000624887 LYPD5Q6UWN5 251 aa13.46□□□□□ -0.25
PCDHB11-202ENST00000624887 ANK2Q01484 3957 aa13.46□□□□□ -0.26
PCDHB11-202ENST00000624887 IGLV10-54A0A075B6I4 117 aa13.45□□□□□ -0.26
PCDHB11-202ENST00000624887 COL6A5A8TX70 2615 aa13.45□□□□□ -0.26
PCDHB11-202ENST00000624887 PFN2P35080 140 aa13.45□□□□□ -0.26
PCDHB11-202ENST00000624887 SND1-IT1Q9HBX3 110 aa13.45□□□□□ -0.26
PCDHB11-202ENST00000624887 LST1O00453 97 aa13.44□□□□□ -0.26
PCDHB11-202ENST00000624887 KIAA0087Q14695 138 aa13.44□□□□□ -0.26
PCDHB11-202ENST00000624887 CLEC2BQ92478 149 aa13.44□□□□□ -0.26
PCDHB11-202ENST00000624887 TRAV13-2A0A0B4J235 113 aa13.43□□□□□ -0.26
PCDHB11-202ENST00000624887 TRBV10-2A0A0K0K1G8 114 aa13.43□□□□□ -0.26
PCDHB11-202ENST00000624887 CCL18P55774 89 aa13.43□□□□□ -0.26
PCDHB11-202ENST00000624887 MDFIQ99750 246 aa13.43□□□□□ -0.26
PCDHB11-202ENST00000624887 PRR34Q9NV39 138 aa13.43□□□□□ -0.26
PCDHB11-202ENST00000624887 DNAH3Q8TD57 4116 aa13.43□□□□□ -0.26
PCDHB11-202ENST00000624887 Q6ZTC4 211 aa13.43□□□□□ -0.26
PCDHB11-202ENST00000624887 KPRPQ5T749 579 aaPredicted RBP13.42□□□□□ -0.26
PCDHB11-202ENST00000624887 C2orf82Q6UX34 121 aa13.42□□□□□ -0.26
PCDHB11-202ENST00000624887 IGKV2-28A0A075B6P5 120 aa13.41□□□□□ -0.26
PCDHB11-202ENST00000624887 IGKV2D-28P01615 120 aa13.41□□□□□ -0.26
PCDHB11-202ENST00000624887 MALP21145 153 aa13.41□□□□□ -0.26
PCDHB11-202ENST00000624887 CXCL5P42830 114 aa13.41□□□□□ -0.26
PCDHB11-202ENST00000624887 CRPP02741 224 aa13.4□□□□□ -0.26
PCDHB11-202ENST00000624887 Q6Q795 121 aa13.4□□□□□ -0.26
PCDHB11-202ENST00000624887 KLK12Q9UKR0 248 aa13.4□□□□□ -0.26
PCDHB11-202ENST00000624887 CFAP161Q6P656 301 aa13.4□□□□□ -0.27
PCDHB11-202ENST00000624887 LINC00337Q8N6G1 96 aa13.4□□□□□ -0.27
PCDHB11-202ENST00000624887 A0A0J9YWU9 116 aa13.38□□□□□ -0.27
PCDHB11-202ENST00000624887 ANAPC13Q9BS18 74 aa13.38□□□□□ -0.27
PCDHB11-202ENST00000624887 ENHOQ6UWT2 76 aa13.38□□□□□ -0.27
PCDHB11-202ENST00000624887 KLK5Q9Y337 293 aaPredicted RBP13.37□□□□□ -0.27
PCDHB11-202ENST00000624887 H3BT86 120 aa13.36□□□□□ -0.27
PCDHB11-202ENST00000624887 COX17Q14061 63 aa13.36□□□□□ -0.27
PCDHB11-202ENST00000624887 RPL28P46779 137 aaKnown RBP13.36□□□□□ -0.27
PCDHB11-202ENST00000624887 NTN5Q8WTR8 489 aaPredicted RBP13.34□□□□□ -0.27
PCDHB11-202ENST00000624887 NANOS2P60321 138 aaKnown RBP13.34□□□□□ -0.27
PCDHB11-202ENST00000624887 C11orf45Q8TAV5 145 aa13.34□□□□□ -0.27
PCDHB11-202ENST00000624887 TENM3Q9P273 2699 aa13.34□□□□□ -0.27
PCDHB11-202ENST00000624887 SNCGO76070 127 aa13.33□□□□□ -0.28
PCDHB11-202ENST00000624887 WFDC10BQ8IUB3 73 aa13.33□□□□□ -0.28
PCDHB11-202ENST00000624887 TRAV8-4A0A0B4J246 113 aa13.32□□□□□ -0.28
PCDHB11-202ENST00000624887 GAGE2BQ13066 116 aa13.32□□□□□ -0.28
PCDHB11-202ENST00000624887 GAGE2EQ4V326 116 aa13.32□□□□□ -0.28
PCDHB11-202ENST00000624887 GAGE2DQ9UEU5 116 aa13.32□□□□□ -0.28
PCDHB11-202ENST00000624887 DEFB131BA0A096LNP1 70 aa13.32□□□□□ -0.28
PCDHB11-202ENST00000624887 NHLRC4P0CG21 123 aaPredicted RBP13.32□□□□□ -0.28
PCDHB11-202ENST00000624887 SPAG11BQ08648 103 aa13.31□□□□□ -0.28
PCDHB11-202ENST00000624887 SMIM11BQ8TCY0 68 aa13.31□□□□□ -0.28
PCDHB11-202ENST00000624887 UBE2WQ96B02 151 aa13.31□□□□□ -0.28
PCDHB11-202ENST00000624887 FAM240AA0A1B0GVK7 77 aa13.3□□□□□ -0.28
PCDHB11-202ENST00000624887 TRACP01848 142 aa13.3□□□□□ -0.28
PCDHB11-202ENST00000624887 ESRGQ1W209 222 aa13.3□□□□□ -0.28
PCDHB11-202ENST00000624887 NDUFV3P56181 108 aaKnown RBP13.29□□□□□ -0.28
PCDHB11-202ENST00000624887 DEFB121Q5J5C9 76 aa13.29□□□□□ -0.28
PCDHB11-202ENST00000624887 TEX49A0A1B0GTD5 131 aa13.28□□□□□ -0.28
PCDHB11-202ENST00000624887 PRB2P02812 416 aaPredicted RBP13.28□□□□□ -0.28
PCDHB11-202ENST00000624887 C9orf116Q5BN46 136 aaPredicted RBP13.28□□□□□ -0.28
PCDHB11-202ENST00000624887 C6orf223Q8N319 242 aa13.28□□□□□ -0.28
PCDHB11-202ENST00000624887 FAM218AQ96MZ4 157 aa13.28□□□□□ -0.28
PCDHB11-202ENST00000624887 NOTCH1P46531 2555 aa13.27□□□□□ -0.28
PCDHB11-202ENST00000624887 NDUFC2O95298 119 aa13.27□□□□□ -0.29
PCDHB11-202ENST00000624887 UNQ6190/PRO20217Q6UXQ8 127 aa13.27□□□□□ -0.29
PCDHB11-202ENST00000624887 C10orf25Q5T742 122 aa13.26□□□□□ -0.29
PCDHB11-202ENST00000624887 K7EIL1 84 aa13.25□□□□□ -0.29
PCDHB11-202ENST00000624887 OR13C6PQ8NH95 151 aa13.25□□□□□ -0.29
PCDHB11-202ENST00000624887 MUC7Q8TAX7 377 aa13.25□□□□□ -0.29
PCDHB11-202ENST00000624887 TM2D3Q9BRN9 247 aa13.25□□□□□ -0.29
PCDHB11-202ENST00000624887 LINC00526Q96FQ7 95 aa13.24□□□□□ -0.29
PCDHB11-202ENST00000624887 H0YGX0 51 aa13.23□□□□□ -0.29
PCDHB11-202ENST00000624887 KRTAP26-1Q6PEX3 210 aa13.23□□□□□ -0.29
PCDHB11-202ENST00000624887 TTC32Q5I0X7 151 aa13.23□□□□□ -0.29
PCDHB11-202ENST00000624887 GVQW2A0A096LPI5 108 aaPredicted RBP13.22□□□□□ -0.29
PCDHB11-202ENST00000624887 LINC01556Q5JQF7 62 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms