RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 LYNX1G3V0Z9 82 aa4.12□□□□□ -1.75
EBF1-211ENST00000622875 LYNX1P0DP58 116 aa4.12□□□□□ -1.75
EBF1-211ENST00000622875 COX7A1P24310 79 aa4.12□□□□□ -1.75
EBF1-211ENST00000622875 IGHV3OR16-10A0A075B7F0 116 aa4.11□□□□□ -1.75
EBF1-211ENST00000622875 TRBV6-8A0A0A6YYG3 113 aa4.11□□□□□ -1.75
EBF1-211ENST00000622875 PATE4P0C8F1 98 aa4.11□□□□□ -1.75
EBF1-211ENST00000622875 GAFA1Q96PS6 74 aa4.11□□□□□ -1.75
EBF1-211ENST00000622875 C7orf69Q9H7B7 122 aa4.11□□□□□ -1.75
EBF1-211ENST00000622875 MYCBP2O75592 4640 aa4.11□□□□□ -1.75
EBF1-211ENST00000622875 C17orf98A8MV24 154 aa4.11□□□□□ -1.75
EBF1-211ENST00000622875 SEC61BP60468 96 aaKnown RBP4.11□□□□□ -1.75
EBF1-211ENST00000622875 IGHV3-72A0A0B4J1Y9 119 aa4.1□□□□□ -1.75
EBF1-211ENST00000622875 SRRM4A7MD48 611 aaKnown RBP4.1□□□□□ -1.75
EBF1-211ENST00000622875 B3GALT5-AS1P59052 145 aa4.1□□□□□ -1.75
EBF1-211ENST00000622875 Q6ZSV7 163 aa4.1□□□□□ -1.75
EBF1-211ENST00000622875 FGFBP3Q8TAT2 258 aa4.1□□□□□ -1.75
EBF1-211ENST00000622875 LINC00588Q9Y4M8 146 aa4.1□□□□□ -1.75
EBF1-211ENST00000622875 IGHV3OR16-13A0A075B7E8 117 aa4.1□□□□□ -1.75
EBF1-211ENST00000622875 IGKV1-9A0A0C4DH69 117 aa4.1□□□□□ -1.75
EBF1-211ENST00000622875 BPY2O14599 106 aa4.1□□□□□ -1.75
EBF1-211ENST00000622875 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.1□□□□□ -1.75
EBF1-211ENST00000622875 GPHB5Q86YW7 130 aa4.1□□□□□ -1.75
EBF1-211ENST00000622875 TRGV3P03979 118 aa4.09□□□□□ -1.75
EBF1-211ENST00000622875 PMS2P5A8MQ11 134 aa4.09□□□□□ -1.75
EBF1-211ENST00000622875 IGHV3-13P01766 116 aa4.09□□□□□ -1.75
EBF1-211ENST00000622875 CD24P25063 80 aa4.09□□□□□ -1.75
EBF1-211ENST00000622875 CRIP2P52943 208 aaPredicted RBP4.09□□□□□ -1.75
EBF1-211ENST00000622875 KLHL30-AS1Q8NEE0 82 aa4.09□□□□□ -1.75
EBF1-211ENST00000622875 ITLN1Q8WWA0 313 aa4.09□□□□□ -1.75
EBF1-211ENST00000622875 RITA1Q96K30 269 aa4.09□□□□□ -1.75
EBF1-211ENST00000622875 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.75
EBF1-211ENST00000622875 LINC00474Q9P2X8 69 aa4.09□□□□□ -1.75
EBF1-211ENST00000622875 VPS13BQ7Z7G8 4022 aa4.09□□□□□ -1.75
EBF1-211ENST00000622875 A0A087WVE0 104 aa4.09□□□□□ -1.75
EBF1-211ENST00000622875 ELOF1P60002 83 aaKnown RBP4.09□□□□□ -1.75
EBF1-211ENST00000622875 RPL36AP83881 106 aaKnown RBP4.09□□□□□ -1.75
EBF1-211ENST00000622875 RPL36ALQ969Q0 106 aaKnown RBP4.09□□□□□ -1.75
EBF1-211ENST00000622875 WFDC10AQ9H1F0 79 aa4.09□□□□□ -1.75
EBF1-211ENST00000622875 ZFAND3Q9H8U3 227 aa4.09□□□□□ -1.75
EBF1-211ENST00000622875 LINC00205P59089 165 aa4.09□□□□□ -1.76
EBF1-211ENST00000622875 IGKV3-11P04433 115 aa4.08□□□□□ -1.76
EBF1-211ENST00000622875 TMEM14BQ9NUH8 114 aa4.08□□□□□ -1.76
EBF1-211ENST00000622875 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
EBF1-211ENST00000622875 SMAD5-AS1Q9Y6J3 95 aa4.08□□□□□ -1.76
EBF1-211ENST00000622875 EPM2AB3EWF7 344 aa4.08□□□□□ -1.76
EBF1-211ENST00000622875 FP248Q71RG6 208 aaPredicted RBP4.08□□□□□ -1.76
EBF1-211ENST00000622875 C6orf223Q8N319 242 aa4.08□□□□□ -1.76
EBF1-211ENST00000622875 SPAG11BQ08648 103 aa4.07□□□□□ -1.76
EBF1-211ENST00000622875 DPM3Q9P2X0 92 aa4.07□□□□□ -1.76
EBF1-211ENST00000622875 KIAA2026Q5HYC2 2103 aa4.07□□□□□ -1.76
EBF1-211ENST00000622875 TANC2Q9HCD6 1990 aa4.07□□□□□ -1.76
EBF1-211ENST00000622875 IGHV6-1A0A0B4J1U7 121 aa4.07□□□□□ -1.76
EBF1-211ENST00000622875 LINC01546A6NGU7 62 aa4.07□□□□□ -1.76
EBF1-211ENST00000622875 LINC00158P58513 81 aa4.07□□□□□ -1.76
EBF1-211ENST00000622875 SPAG11AQ6PDA7 123 aa4.07□□□□□ -1.76
EBF1-211ENST00000622875 ODF3L1Q8IXM7 274 aa4.07□□□□□ -1.76
EBF1-211ENST00000622875 A0A0J9YXV3 536 aa4.07□□□□□ -1.76
EBF1-211ENST00000622875 MUC2Q02817 5179 aa4.07□□□□□ -1.76
EBF1-211ENST00000622875 IGHV3-64A0A075B6Q5 118 aa4.07□□□□□ -1.76
EBF1-211ENST00000622875 LECT2O14960 151 aa4.06□□□□□ -1.76
EBF1-211ENST00000622875 IGKV1-39P01597 117 aa4.06□□□□□ -1.76
EBF1-211ENST00000622875 IGKV1D-39P04432 117 aa4.06□□□□□ -1.76
EBF1-211ENST00000622875 LINC00208Q96KT6 92 aa4.06□□□□□ -1.76
EBF1-211ENST00000622875 MAP6D1Q9H9H5 199 aa4.06□□□□□ -1.76
EBF1-211ENST00000622875 CTSZQ9UBR2 303 aa4.06□□□□□ -1.76
EBF1-211ENST00000622875 IGLV3-21P80748 117 aaPredicted RBP4.06□□□□□ -1.76
EBF1-211ENST00000622875 HIGD2AQ9BW72 106 aa4.06□□□□□ -1.76
EBF1-211ENST00000622875 IGHV3-21A0A0B4J1V1 117 aa4.05□□□□□ -1.76
EBF1-211ENST00000622875 TRAV22A0A0B4J277 110 aa4.05□□□□□ -1.76
EBF1-211ENST00000622875 H3BPC8 53 aa4.05□□□□□ -1.76
EBF1-211ENST00000622875 SORL1Q92673 2214 aa4.05□□□□□ -1.76
EBF1-211ENST00000622875 DEFB112Q30KQ8 113 aa4.05□□□□□ -1.76
EBF1-211ENST00000622875 HCP5Q6MZN7 132 aa4.05□□□□□ -1.76
EBF1-211ENST00000622875 FOXL2NBQ6ZUU3 175 aa4.05□□□□□ -1.76
EBF1-211ENST00000622875 LINC00846Q9NV44 126 aa4.05□□□□□ -1.76
EBF1-211ENST00000622875 LENEPQ9Y5L5 61 aa4.05□□□□□ -1.76
EBF1-211ENST00000622875 RNF213Q63HN8 5207 aa4.05□□□□□ -1.76
EBF1-211ENST00000622875 KIAA0087Q14695 138 aa4.04□□□□□ -1.76
EBF1-211ENST00000622875 Q8N3U1 123 aa4.04□□□□□ -1.76
EBF1-211ENST00000622875 NDPQ00604 133 aa4.04□□□□□ -1.76
EBF1-211ENST00000622875 A0A087X002 238 aa4.04□□□□□ -1.76
EBF1-211ENST00000622875 LOC101927531A0A1B0GV80 90 aa4.04□□□□□ -1.76
EBF1-211ENST00000622875 IGHV1-2P23083 117 aa4.04□□□□□ -1.76
EBF1-211ENST00000622875 SYCNQ0VAF6 134 aa4.04□□□□□ -1.76
EBF1-211ENST00000622875 ARHGAP32A7KAX9 2087 aa4.03□□□□□ -1.76
EBF1-211ENST00000622875 IGKV1D-43A0A0B4J1Z2 117 aa4.03□□□□□ -1.76
EBF1-211ENST00000622875 TRBV10-1A0A0K0K1A3 114 aa4.03□□□□□ -1.76
EBF1-211ENST00000622875 APOBP04114 4563 aaKnown RBP4.03□□□□□ -1.76
EBF1-211ENST00000622875 LINC00313P59037 77 aa4.03□□□□□ -1.76
EBF1-211ENST00000622875 HIGD2BQ4VC39 106 aa4.03□□□□□ -1.76
EBF1-211ENST00000622875 TFF1P04155 84 aa4.03□□□□□ -1.76
EBF1-211ENST00000622875 APELAP0DMC3 54 aa4.03□□□□□ -1.76
EBF1-211ENST00000622875 IGHV3-30-3P0DP02 117 aa4.03□□□□□ -1.76
EBF1-211ENST00000622875 PRB3Q04118 309 aaPredicted RBP4.03□□□□□ -1.76
EBF1-211ENST00000622875 FHL1Q13642 323 aa4.03□□□□□ -1.76
EBF1-211ENST00000622875 RNASE13Q5GAN3 156 aaKnown RBP4.03□□□□□ -1.76
EBF1-211ENST00000622875 SND1-IT1Q9HBX3 110 aa4.03□□□□□ -1.76
EBF1-211ENST00000622875 A0A096LNJ9 63 aa4.03□□□□□ -1.77
EBF1-211ENST00000622875 LY6G6CO95867 125 aa4.03□□□□□ -1.77
EBF1-211ENST00000622875 IGHV4-38-2P0DP08 117 aa4.03□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms