RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 C4orf3Q8WVX3 66 aa8.1□□□□□ -1.11
PCDHGA11-203ENST00000622044 UBL5Q9BZL1 73 aa8.1□□□□□ -1.11
PCDHGA11-203ENST00000622044 USP17L23D6RBM5 183 aa8.1□□□□□ -1.11
PCDHGA11-203ENST00000622044 PF4P02776 101 aa8.1□□□□□ -1.11
PCDHGA11-203ENST00000622044 LRRC75A-AS1Q8N1F1 130 aa8.09□□□□□ -1.11
PCDHGA11-203ENST00000622044 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
PCDHGA11-203ENST00000622044 RPL18AQ02543 176 aaKnown RBP8.09□□□□□ -1.11
PCDHGA11-203ENST00000622044 C9orf129Q5T035 196 aaKnown RBP8.09□□□□□ -1.11
PCDHGA11-203ENST00000622044 ENHOQ6UWT2 76 aa8.09□□□□□ -1.11
PCDHGA11-203ENST00000622044 GHRHP01286 108 aa8.09□□□□□ -1.11
PCDHGA11-203ENST00000622044 RPL28P46779 137 aaKnown RBP8.09□□□□□ -1.11
PCDHGA11-203ENST00000622044 C20orf197Q8N268 126 aa8.08□□□□□ -1.12
PCDHGA11-203ENST00000622044 IGLV5-45A0A087WSX0 123 aa8.08□□□□□ -1.12
PCDHGA11-203ENST00000622044 BEAN1Q3B7T3 259 aa8.08□□□□□ -1.12
PCDHGA11-203ENST00000622044 HILS1P60008 231 aa8.08□□□□□ -1.12
PCDHGA11-203ENST00000622044 ZFHX3Q15911 3703 aa8.07□□□□□ -1.12
PCDHGA11-203ENST00000622044 TRBV6-8A0A0A6YYG3 113 aa8.07□□□□□ -1.12
PCDHGA11-203ENST00000622044 APCP25054 2843 aa8.07□□□□□ -1.12
PCDHGA11-203ENST00000622044 C16orf74Q96GX8 76 aa8.07□□□□□ -1.12
PCDHGA11-203ENST00000622044 UNC79Q9P2D8 2635 aa8.06□□□□□ -1.12
PCDHGA11-203ENST00000622044 C9orf116Q5BN46 136 aaPredicted RBP8.06□□□□□ -1.12
PCDHGA11-203ENST00000622044 FAM19A5Q7Z5A7 132 aaPredicted RBP8.06□□□□□ -1.12
PCDHGA11-203ENST00000622044 IGKV2-28A0A075B6P5 120 aa8.06□□□□□ -1.12
PCDHGA11-203ENST00000622044 IGKV2D-28P01615 120 aa8.06□□□□□ -1.12
PCDHGA11-203ENST00000622044 IGHV4-31P0DP07 118 aa8.06□□□□□ -1.12
PCDHGA11-203ENST00000622044 LINC00269Q8N2A0 174 aa8.06□□□□□ -1.12
PCDHGA11-203ENST00000622044 IBA57-AS1B1ANH7 110 aa8.05□□□□□ -1.12
PCDHGA11-203ENST00000622044 F5H768 121 aa8.05□□□□□ -1.12
PCDHGA11-203ENST00000622044 DEFB121Q5J5C9 76 aa8.05□□□□□ -1.12
PCDHGA11-203ENST00000622044 KIR2DL5BQ8NHK3 375 aa8.05□□□□□ -1.12
PCDHGA11-203ENST00000622044 C6orf99Q4VX62 202 aa8.05□□□□□ -1.12
PCDHGA11-203ENST00000622044 A8MTW9 85 aa8.05□□□□□ -1.12
PCDHGA11-203ENST00000622044 FAM222AQ5U5X8 452 aa8.05□□□□□ -1.12
PCDHGA11-203ENST00000622044 MXRA5Q9NR99 2828 aa8.05□□□□□ -1.12
PCDHGA11-203ENST00000622044 SERP2Q8N6R1 65 aa8.04□□□□□ -1.12
PCDHGA11-203ENST00000622044 SCXQ7RTU7 201 aa8.04□□□□□ -1.12
PCDHGA11-203ENST00000622044 FAM19A1Q7Z5A9 133 aa8.04□□□□□ -1.12
PCDHGA11-203ENST00000622044 LINC00959A0A1B0GUT2 108 aa8.03□□□□□ -1.12
PCDHGA11-203ENST00000622044 CSDC2Q9Y534 153 aaKnown RBP8.03□□□□□ -1.12
PCDHGA11-203ENST00000622044 UPK3BQ9BT76 320 aa8.02□□□□□ -1.13
PCDHGA11-203ENST00000622044 TENM4Q6N022 2769 aa8.02□□□□□ -1.13
PCDHGA11-203ENST00000622044 DNAJC9-AS1A6NH13 148 aa8.02□□□□□ -1.13
PCDHGA11-203ENST00000622044 TRBV6-4A0A1B0GX49 114 aa8.01□□□□□ -1.13
PCDHGA11-203ENST00000622044 JMJD7-PLA2G4BH0Y9G9 81 aa8.01□□□□□ -1.13
PCDHGA11-203ENST00000622044 TMEM256-PLSCR3K7ERE1 68 aa8.01□□□□□ -1.13
PCDHGA11-203ENST00000622044 Q6JHZ5 121 aa8.01□□□□□ -1.13
PCDHGA11-203ENST00000622044 ATRQ13535 2644 aa8□□□□□ -1.13
PCDHGA11-203ENST00000622044 IGHV3OR16-9A0A0B4J2B5 98 aa8□□□□□ -1.13
PCDHGA11-203ENST00000622044 RBM3P98179 157 aaKnown RBP7.99□□□□□ -1.13
PCDHGA11-203ENST00000622044 A0A087WZ39 114 aa7.99□□□□□ -1.13
PCDHGA11-203ENST00000622044 XAGE1AQ9HD64 81 aa7.99□□□□□ -1.13
PCDHGA11-203ENST00000622044 SMIM9A6NGZ8 99 aa7.99□□□□□ -1.13
PCDHGA11-203ENST00000622044 HRCT1Q6UXD1 115 aa7.99□□□□□ -1.13
PCDHGA11-203ENST00000622044 SNURFQ9Y675 71 aa7.99□□□□□ -1.13
PCDHGA11-203ENST00000622044 TRAV25A0A0B4J276 109 aa7.98□□□□□ -1.13
PCDHGA11-203ENST00000622044 DEFB113Q30KQ7 82 aa7.98□□□□□ -1.13
PCDHGA11-203ENST00000622044 CHCHD10Q8WYQ3 142 aaPredicted RBP7.98□□□□□ -1.13
PCDHGA11-203ENST00000622044 F8P00451 2351 aa7.98□□□□□ -1.13
PCDHGA11-203ENST00000622044 NBPF19A0A087WUL8 3843 aa7.98□□□□□ -1.13
PCDHGA11-203ENST00000622044 DEFB135Q30KP9 77 aa7.98□□□□□ -1.13
PCDHGA11-203ENST00000622044 CCKP06307 115 aa7.97□□□□□ -1.13
PCDHGA11-203ENST00000622044 LINC00482Q8N8I6 264 aa7.97□□□□□ -1.13
PCDHGA11-203ENST00000622044 CMC4P56277 68 aaPredicted RBP7.97□□□□□ -1.13
PCDHGA11-203ENST00000622044 TMEM258P61165 79 aa7.97□□□□□ -1.13
PCDHGA11-203ENST00000622044 FHL2Q14192 279 aa7.97□□□□□ -1.13
PCDHGA11-203ENST00000622044 Q8N3U1 123 aa7.97□□□□□ -1.13
PCDHGA11-203ENST00000622044 Q8N814 137 aa7.97□□□□□ -1.13
PCDHGA11-203ENST00000622044 NIPBLQ6KC79 2804 aaeCLIP7.97□□□□□ -1.13
PCDHGA11-203ENST00000622044 DAD1P61803 113 aa7.96□□□□□ -1.13
PCDHGA11-203ENST00000622044 SPAG11BQ08648 103 aa7.96□□□□□ -1.13
PCDHGA11-203ENST00000622044 C5orf47Q569G3 176 aa7.96□□□□□ -1.13
PCDHGA11-203ENST00000622044 Q6ZQY7 126 aa7.96□□□□□ -1.13
PCDHGA11-203ENST00000622044 CYSTM1Q9H1C7 97 aa7.96□□□□□ -1.13
PCDHGA11-203ENST00000622044 KLK12Q9UKR0 248 aa7.96□□□□□ -1.14
PCDHGA11-203ENST00000622044 REG3AQ06141 175 aa7.96□□□□□ -1.14
PCDHGA11-203ENST00000622044 LINC01600Q96MT4 127 aa7.96□□□□□ -1.14
PCDHGA11-203ENST00000622044 SMR3AQ99954 134 aa7.96□□□□□ -1.14
PCDHGA11-203ENST00000622044 UBR5O95071 2799 aaPredicted RBP7.96□□□□□ -1.14
PCDHGA11-203ENST00000622044 J3QKU1 62 aa7.95□□□□□ -1.14
PCDHGA11-203ENST00000622044 CRYGAP11844 174 aa7.95□□□□□ -1.14
PCDHGA11-203ENST00000622044 LINC01561Q8N1V8 128 aa7.95□□□□□ -1.14
PCDHGA11-203ENST00000622044 PRO0255Q9UI72 69 aa7.95□□□□□ -1.14
PCDHGA11-203ENST00000622044 C6orf223Q8N319 242 aa7.94□□□□□ -1.14
PCDHGA11-203ENST00000622044 DEFB105AQ8NG35 78 aa7.93□□□□□ -1.14
PCDHGA11-203ENST00000622044 UNQ6190/PRO20217Q6UXQ8 127 aa7.93□□□□□ -1.14
PCDHGA11-203ENST00000622044 C22orf24Q9Y442 160 aa7.93□□□□□ -1.14
PCDHGA11-203ENST00000622044 SETXQ7Z333 2677 aaKnown RBP7.92□□□□□ -1.14
PCDHGA11-203ENST00000622044 C4orf26Q17RF5 130 aa7.92□□□□□ -1.14
PCDHGA11-203ENST00000622044 HIGD2BQ4VC39 106 aa7.92□□□□□ -1.14
PCDHGA11-203ENST00000622044 FAM236DA0A1B0GTK5 79 aa7.92□□□□□ -1.14
PCDHGA11-203ENST00000622044 FAM236CP0DP71 79 aa7.92□□□□□ -1.14
PCDHGA11-203ENST00000622044 Q8IZM0 81 aa7.92□□□□□ -1.14
PCDHGA11-203ENST00000622044 LINC01006Q8NI28 216 aa7.92□□□□□ -1.14
PCDHGA11-203ENST00000622044 DPH3Q96FX2 82 aa7.92□□□□□ -1.14
PCDHGA11-203ENST00000622044 IGHV4-28A0A0C4DH34 117 aa7.91□□□□□ -1.14
PCDHGA11-203ENST00000622044 ZNF561-AS1K7EIQ3 104 aa7.91□□□□□ -1.14
PCDHGA11-203ENST00000622044 C2orf48Q96LS8 159 aa7.91□□□□□ -1.14
PCDHGA11-203ENST00000622044 CD164L2Q6UWJ8 174 aa7.89□□□□□ -1.15
PCDHGA11-203ENST00000622044 DIRC1Q969H9 104 aa7.88□□□□□ -1.15
PCDHGA11-203ENST00000622044 CYSRT1A8MQ03 144 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms