RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 UBR5O95071 2799 aaPredicted RBP11.02□□□□□ -0.65
NPHP4-211ENST00000622020 UQCRQO14949 82 aa11.01□□□□□ -0.65
NPHP4-211ENST00000622020 FHL2Q14192 279 aa11.01□□□□□ -0.65
NPHP4-211ENST00000622020 LINC00846Q9NV44 126 aa11.01□□□□□ -0.65
NPHP4-211ENST00000622020 IMUPQ9GZP8 106 aa11.01□□□□□ -0.65
NPHP4-211ENST00000622020 IGLV10-54A0A075B6I4 117 aa11.01□□□□□ -0.65
NPHP4-211ENST00000622020 CYSTM1Q9H1C7 97 aa11.01□□□□□ -0.65
NPHP4-211ENST00000622020 NOTCH2Q04721 2471 aa11□□□□□ -0.65
NPHP4-211ENST00000622020 TRAV25A0A0B4J276 109 aa11□□□□□ -0.65
NPHP4-211ENST00000622020 TRBV6-4A0A1B0GX49 114 aa11□□□□□ -0.65
NPHP4-211ENST00000622020 LRRC75A-AS1Q8N1F1 130 aa11□□□□□ -0.65
NPHP4-211ENST00000622020 VWFP04275 2813 aa10.99□□□□□ -0.65
NPHP4-211ENST00000622020 PF4P02776 101 aa10.99□□□□□ -0.65
NPHP4-211ENST00000622020 LINC00526Q96FQ7 95 aa10.99□□□□□ -0.65
NPHP4-211ENST00000622020 LINC00959A0A1B0GUT2 108 aa10.99□□□□□ -0.65
NPHP4-211ENST00000622020 hADV29S1A0JD25 119 aa10.99□□□□□ -0.65
NPHP4-211ENST00000622020 ITPR2Q14571 2701 aa10.99□□□□□ -0.65
NPHP4-211ENST00000622020 DEFB4AO15263 64 aa10.98□□□□□ -0.65
NPHP4-211ENST00000622020 GYPEP15421 78 aa10.98□□□□□ -0.65
NPHP4-211ENST00000622020 FAM222AQ5U5X8 452 aa10.98□□□□□ -0.65
NPHP4-211ENST00000622020 Q8N3U1 123 aa10.98□□□□□ -0.65
NPHP4-211ENST00000622020 A0A087WZ39 114 aa10.98□□□□□ -0.65
NPHP4-211ENST00000622020 C9orf116Q5BN46 136 aaPredicted RBP10.97□□□□□ -0.65
NPHP4-211ENST00000622020 WFDC9Q8NEX5 89 aa10.97□□□□□ -0.65
NPHP4-211ENST00000622020 FAM19A5Q7Z5A7 132 aaPredicted RBP10.97□□□□□ -0.65
NPHP4-211ENST00000622020 IBA57-AS1B1ANH7 110 aa10.96□□□□□ -0.65
NPHP4-211ENST00000622020 CXCL5P42830 114 aa10.96□□□□□ -0.66
NPHP4-211ENST00000622020 CSNK1G2-AS1Q8NCQ2 148 aa10.96□□□□□ -0.66
NPHP4-211ENST00000622020 LINC01006Q8NI28 216 aa10.96□□□□□ -0.66
NPHP4-211ENST00000622020 COX7CP15954 63 aa10.95□□□□□ -0.66
NPHP4-211ENST00000622020 HIST1H4AP62805 103 aaKnown RBP10.95□□□□□ -0.66
NPHP4-211ENST00000622020 C2orf48Q96LS8 159 aa10.95□□□□□ -0.66
NPHP4-211ENST00000622020 C19orf73Q9NVV2 129 aa10.95□□□□□ -0.66
NPHP4-211ENST00000622020 H0YGX0 51 aa10.94□□□□□ -0.66
NPHP4-211ENST00000622020 A0A1B0GX51 115 aa10.94□□□□□ -0.66
NPHP4-211ENST00000622020 KRTAP1-3Q8IUG1 177 aa10.93□□□□□ -0.66
NPHP4-211ENST00000622020 KIR2DL5BQ8NHK3 375 aa10.93□□□□□ -0.66
NPHP4-211ENST00000622020 J3KT08 172 aa10.93□□□□□ -0.66
NPHP4-211ENST00000622020 LINC00269Q8N2A0 174 aa10.92□□□□□ -0.66
NPHP4-211ENST00000622020 OVOL2Q9BRP0 275 aa10.92□□□□□ -0.66
NPHP4-211ENST00000622020 ORMDL1Q9P0S3 153 aa10.91□□□□□ -0.66
NPHP4-211ENST00000622020 IGLV1-51P01701 117 aa10.91□□□□□ -0.66
NPHP4-211ENST00000622020 SS18Q15532 418 aa10.91□□□□□ -0.66
NPHP4-211ENST00000622020 HILS1P60008 231 aa10.9□□□□□ -0.66
NPHP4-211ENST00000622020 TMEM86BQ8N661 226 aa10.9□□□□□ -0.66
NPHP4-211ENST00000622020 SMIM9A6NGZ8 99 aa10.9□□□□□ -0.66
NPHP4-211ENST00000622020 LINC00482Q8N8I6 264 aa10.88□□□□□ -0.67
NPHP4-211ENST00000622020 ANGP03950 147 aaKnown RBP10.87□□□□□ -0.67
NPHP4-211ENST00000622020 LINC01561Q8N1V8 128 aa10.87□□□□□ -0.67
NPHP4-211ENST00000622020 ATOX1O00244 68 aa10.87□□□□□ -0.67
NPHP4-211ENST00000622020 CRYGAP11844 174 aa10.87□□□□□ -0.67
NPHP4-211ENST00000622020 DSCR8Q96T75 97 aa10.87□□□□□ -0.67
NPHP4-211ENST00000622020 TENM4Q6N022 2769 aa10.87□□□□□ -0.67
NPHP4-211ENST00000622020 NANOS2P60321 138 aaKnown RBP10.87□□□□□ -0.67
NPHP4-211ENST00000622020 RPL18AQ02543 176 aaKnown RBP10.86□□□□□ -0.67
NPHP4-211ENST00000622020 C5orf47Q569G3 176 aa10.86□□□□□ -0.67
NPHP4-211ENST00000622020 ZNF843Q8N446 348 aa10.86□□□□□ -0.67
NPHP4-211ENST00000622020 Q8NDZ9 215 aa10.86□□□□□ -0.67
NPHP4-211ENST00000622020 C6orf99Q4VX62 202 aa10.85□□□□□ -0.67
NPHP4-211ENST00000622020 C6orf223Q8N319 242 aa10.85□□□□□ -0.67
NPHP4-211ENST00000622020 Q8N814 137 aa10.84□□□□□ -0.67
NPHP4-211ENST00000622020 FASNP49327 2511 aaKnown RBP10.84□□□□□ -0.67
NPHP4-211ENST00000622020 TRAV23DV6A0A075B6W5 121 aa10.84□□□□□ -0.67
NPHP4-211ENST00000622020 USP17L23D6RBM5 183 aa10.84□□□□□ -0.67
NPHP4-211ENST00000622020 HTN3P15516 51 aa10.84□□□□□ -0.67
NPHP4-211ENST00000622020 OBSCN-AS1Q96MR7 158 aa10.84□□□□□ -0.67
NPHP4-211ENST00000622020 FAM19A1Q7Z5A9 133 aa10.84□□□□□ -0.67
NPHP4-211ENST00000622020 Q8IZM0 81 aa10.83□□□□□ -0.68
NPHP4-211ENST00000622020 CHCHD10Q8WYQ3 142 aaPredicted RBP10.83□□□□□ -0.68
NPHP4-211ENST00000622020 SPATA3Q8NHX4 192 aa10.83□□□□□ -0.68
NPHP4-211ENST00000622020 OXTP01178 125 aa10.82□□□□□ -0.68
NPHP4-211ENST00000622020 S100A7L2Q5SY68 101 aa10.82□□□□□ -0.68
NPHP4-211ENST00000622020 Q6JHZ5 121 aa10.82□□□□□ -0.68
NPHP4-211ENST00000622020 ENHOQ6UWT2 76 aa10.82□□□□□ -0.68
NPHP4-211ENST00000622020 CMC4P56277 68 aaPredicted RBP10.82□□□□□ -0.68
NPHP4-211ENST00000622020 CCKP06307 115 aa10.82□□□□□ -0.68
NPHP4-211ENST00000622020 DEFB135Q30KP9 77 aa10.82□□□□□ -0.68
NPHP4-211ENST00000622020 LY6G6DO95868 133 aa10.81□□□□□ -0.68
NPHP4-211ENST00000622020 C10orf25Q5T742 122 aa10.81□□□□□ -0.68
NPHP4-211ENST00000622020 SMR3AQ99954 134 aa10.81□□□□□ -0.68
NPHP4-211ENST00000622020 PRO0255Q9UI72 69 aa10.81□□□□□ -0.68
NPHP4-211ENST00000622020 DPH3Q96FX2 82 aa10.8□□□□□ -0.68
NPHP4-211ENST00000622020 REG3AQ06141 175 aa10.8□□□□□ -0.68
NPHP4-211ENST00000622020 UNQ6190/PRO20217Q6UXQ8 127 aa10.8□□□□□ -0.68
NPHP4-211ENST00000622020 KIAA0087Q14695 138 aa10.79□□□□□ -0.68
NPHP4-211ENST00000622020 TENM1Q9UKZ4 2725 aa10.79□□□□□ -0.68
NPHP4-211ENST00000622020 X6R8D5 127 aa10.79□□□□□ -0.68
NPHP4-211ENST00000622020 SERP2Q8N6R1 65 aa10.79□□□□□ -0.68
NPHP4-211ENST00000622020 C4orf26Q17RF5 130 aa10.78□□□□□ -0.68
NPHP4-211ENST00000622020 PDZD2O15018 2839 aa10.78□□□□□ -0.68
NPHP4-211ENST00000622020 A0A1B0GUV1 79 aa10.78□□□□□ -0.68
NPHP4-211ENST00000622020 M0R2N4 97 aa10.78□□□□□ -0.68
NPHP4-211ENST00000622020 LAMTOR3Q9UHA4 124 aa10.78□□□□□ -0.68
NPHP4-211ENST00000622020 UPK3BQ9BT76 320 aa10.77□□□□□ -0.68
NPHP4-211ENST00000622020 ATRQ13535 2644 aa10.77□□□□□ -0.69
NPHP4-211ENST00000622020 TMEM256-PLSCR3K7ERE1 68 aa10.77□□□□□ -0.69
NPHP4-211ENST00000622020 KMT2BQ9UMN6 2715 aaPredicted RBP10.77□□□□□ -0.69
NPHP4-211ENST00000622020 ANK3Q12955 4377 aaKnown RBP10.77□□□□□ -0.69
NPHP4-211ENST00000622020 CD164L2Q6UWJ8 174 aa10.76□□□□□ -0.69
NPHP4-211ENST00000622020 TRRAPQ9Y4A5 3859 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms