RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 DNAH2Q9P225 4427 aa10.54□□□□□ -0.72
CBWD3-216ENST00000621396 HYDINQ4G0P3 5121 aa10.54□□□□□ -0.72
CBWD3-216ENST00000621396 GCSHP23434 173 aa10.54□□□□□ -0.72
CBWD3-216ENST00000621396 EIF4EBP3O60516 100 aaPredicted RBP10.54□□□□□ -0.72
CBWD3-216ENST00000621396 CKS1BP61024 79 aa10.54□□□□□ -0.72
CBWD3-216ENST00000621396 Q8IZM0 81 aa10.54□□□□□ -0.72
CBWD3-216ENST00000621396 PFN2P35080 140 aa10.53□□□□□ -0.72
CBWD3-216ENST00000621396 MEIG1Q5JSS6 88 aa10.53□□□□□ -0.72
CBWD3-216ENST00000621396 UNQ6190/PRO20217Q6UXQ8 127 aa10.53□□□□□ -0.72
CBWD3-216ENST00000621396 LITAFQ99732 161 aa10.53□□□□□ -0.72
CBWD3-216ENST00000621396 HIGD1BQ9P298 99 aa10.53□□□□□ -0.72
CBWD3-216ENST00000621396 SMIM13P0DJ93 91 aa10.53□□□□□ -0.72
CBWD3-216ENST00000621396 CFAP161Q6P656 301 aa10.53□□□□□ -0.72
CBWD3-216ENST00000621396 APOMO95445 188 aa10.52□□□□□ -0.73
CBWD3-216ENST00000621396 BVES-AS1Q5T3Y7 98 aa10.52□□□□□ -0.73
CBWD3-216ENST00000621396 FXYD2P54710 66 aa10.52□□□□□ -0.73
CBWD3-216ENST00000621396 WFDC2Q14508 124 aa10.52□□□□□ -0.73
CBWD3-216ENST00000621396 ZNF561-AS1K7EIQ3 104 aa10.5□□□□□ -0.73
CBWD3-216ENST00000621396 M0R143 59 aa10.5□□□□□ -0.73
CBWD3-216ENST00000621396 HSD52Q0P140 79 aa10.5□□□□□ -0.73
CBWD3-216ENST00000621396 LINC01561Q8N1V8 128 aa10.5□□□□□ -0.73
CBWD3-216ENST00000621396 USP17L23D6RBM5 183 aa10.49□□□□□ -0.73
CBWD3-216ENST00000621396 PSCAO43653 123 aa10.49□□□□□ -0.73
CBWD3-216ENST00000621396 CEND1Q8N111 149 aa10.49□□□□□ -0.73
CBWD3-216ENST00000621396 LINC00158P58513 81 aa10.48□□□□□ -0.73
CBWD3-216ENST00000621396 MUSTN1Q8IVN3 82 aa10.48□□□□□ -0.73
CBWD3-216ENST00000621396 TMEM238C9JI98 176 aa10.47□□□□□ -0.73
CBWD3-216ENST00000621396 PTTG1IPP53801 180 aa10.47□□□□□ -0.73
CBWD3-216ENST00000621396 LINC00476Q8WZB0 136 aa10.47□□□□□ -0.73
CBWD3-216ENST00000621396 HERV-K104P63124 156 aa10.47□□□□□ -0.73
CBWD3-216ENST00000621396 Q6ZVH6 145 aa10.47□□□□□ -0.73
CBWD3-216ENST00000621396 NTN5Q8WTR8 489 aaPredicted RBP10.47□□□□□ -0.73
CBWD3-216ENST00000621396 RMI2Q96E14 147 aa10.47□□□□□ -0.73
CBWD3-216ENST00000621396 C3orf84H3BNL1 204 aa10.46□□□□□ -0.73
CBWD3-216ENST00000621396 K7ERJ3 54 aa10.46□□□□□ -0.73
CBWD3-216ENST00000621396 MIR7-3HGQ8N6C7 128 aa10.46□□□□□ -0.73
CBWD3-216ENST00000621396 CAMK2N2Q96S95 79 aa10.46□□□□□ -0.73
CBWD3-216ENST00000621396 ERG28Q9UKR5 140 aa10.46□□□□□ -0.73
CBWD3-216ENST00000621396 SLPIP03973 132 aa10.46□□□□□ -0.74
CBWD3-216ENST00000621396 TTC32Q5I0X7 151 aa10.46□□□□□ -0.74
CBWD3-216ENST00000621396 CIRBPQ14011 172 aaKnown RBP10.45□□□□□ -0.74
CBWD3-216ENST00000621396 Q6ZRU5 148 aa10.45□□□□□ -0.74
CBWD3-216ENST00000621396 SPANXB1Q9NS25 103 aaPredicted RBP10.45□□□□□ -0.74
CBWD3-216ENST00000621396 SOSTDC1Q6X4U4 206 aa10.45□□□□□ -0.74
CBWD3-216ENST00000621396 C6orf48Q9UBA6 75 aa10.45□□□□□ -0.74
CBWD3-216ENST00000621396 NHP2Q9NX24 153 aaKnown RBP10.44□□□□□ -0.74
CBWD3-216ENST00000621396 TM2D2Q9BX73 214 aa10.44□□□□□ -0.74
CBWD3-216ENST00000621396 GVQW2A0A096LPI5 108 aaPredicted RBP10.43□□□□□ -0.74
CBWD3-216ENST00000621396 Q6ZRN7 208 aaPredicted RBP10.43□□□□□ -0.74
CBWD3-216ENST00000621396 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.42□□□□□ -0.74
CBWD3-216ENST00000621396 A4D1N5 150 aa10.42□□□□□ -0.74
CBWD3-216ENST00000621396 CXCL5P42830 114 aa10.42□□□□□ -0.74
CBWD3-216ENST00000621396 RAB37Q96AX2 223 aa10.42□□□□□ -0.74
CBWD3-216ENST00000621396 TAL2Q16559 108 aa10.42□□□□□ -0.74
CBWD3-216ENST00000621396 Q6ZR54 194 aa10.42□□□□□ -0.74
CBWD3-216ENST00000621396 LINC00308Q8TCZ7 52 aa10.42□□□□□ -0.74
CBWD3-216ENST00000621396 SPANXDQ9BXN6 97 aa10.42□□□□□ -0.74
CBWD3-216ENST00000621396 SPANXCQ9NY87 97 aa10.42□□□□□ -0.74
CBWD3-216ENST00000621396 COX11Q9Y6N1 276 aa10.42□□□□□ -0.74
CBWD3-216ENST00000621396 TIMM17BO60830 172 aa10.41□□□□□ -0.74
CBWD3-216ENST00000621396 FUSP35637 526 aaKnown RBP eCLIP10.41□□□□□ -0.74
CBWD3-216ENST00000621396 NAA38Q9BRA0 125 aaKnown RBP10.4□□□□□ -0.74
CBWD3-216ENST00000621396 SYCNQ0VAF6 134 aa10.39□□□□□ -0.75
CBWD3-216ENST00000621396 SACSQ9NZJ4 4579 aa10.39□□□□□ -0.75
CBWD3-216ENST00000621396 KMT2CQ8NEZ4 4911 aaKnown RBP10.39□□□□□ -0.75
CBWD3-216ENST00000621396 SFTA2Q6UW10 78 aa10.38□□□□□ -0.75
CBWD3-216ENST00000621396 XAGE1AQ9HD64 81 aa10.38□□□□□ -0.75
CBWD3-216ENST00000621396 LRCOL1A6NCL2 159 aa10.37□□□□□ -0.75
CBWD3-216ENST00000621396 CFC1BP0CG36 223 aa10.37□□□□□ -0.75
CBWD3-216ENST00000621396 CFC1P0CG37 223 aa10.37□□□□□ -0.75
CBWD3-216ENST00000621396 ALMS1Q8TCU4 4167 aa10.37□□□□□ -0.75
CBWD3-216ENST00000621396 FRAS1Q86XX4 4008 aa10.37□□□□□ -0.75
CBWD3-216ENST00000621396 LINC01620Q4KN68 170 aa10.37□□□□□ -0.75
CBWD3-216ENST00000621396 COL5A1-AS1Q5SY13 56 aa10.37□□□□□ -0.75
CBWD3-216ENST00000621396 C2orf48Q96LS8 159 aa10.37□□□□□ -0.75
CBWD3-216ENST00000621396 PRR3P79522 188 aaKnown RBP10.36□□□□□ -0.75
CBWD3-216ENST00000621396 GAGE2EQ4V326 116 aa10.36□□□□□ -0.75
CBWD3-216ENST00000621396 GAGE2DQ9UEU5 116 aa10.36□□□□□ -0.75
CBWD3-216ENST00000621396 RPL24P83731 157 aaKnown RBP10.36□□□□□ -0.75
CBWD3-216ENST00000621396 CARD19Q96LW7 228 aa10.36□□□□□ -0.75
CBWD3-216ENST00000621396 SND1-IT1Q9HBX3 110 aa10.36□□□□□ -0.75
CBWD3-216ENST00000621396 A6NDN8 102 aa10.35□□□□□ -0.75
CBWD3-216ENST00000621396 Q6ZRP5 223 aa10.35□□□□□ -0.75
CBWD3-216ENST00000621396 Q8NDZ9 215 aa10.35□□□□□ -0.75
CBWD3-216ENST00000621396 TAX1BP3O14907 124 aa10.34□□□□□ -0.75
CBWD3-216ENST00000621396 C1orf134Q5TEV5 83 aa10.34□□□□□ -0.75
CBWD3-216ENST00000621396 HECTD4Q9Y4D8 3996 aa10.34□□□□□ -0.75
CBWD3-216ENST00000621396 H7C2G1 150 aa10.34□□□□□ -0.75
CBWD3-216ENST00000621396 COX17Q14061 63 aa10.34□□□□□ -0.75
CBWD3-216ENST00000621396 TRBV30A0A0K0K1B3 111 aa10.33□□□□□ -0.76
CBWD3-216ENST00000621396 TMEM238LA0A1B0GVL6 79 aa10.33□□□□□ -0.76
CBWD3-216ENST00000621396 A6NJY4 79 aa10.33□□□□□ -0.76
CBWD3-216ENST00000621396 IFITM1P13164 125 aa10.33□□□□□ -0.76
CBWD3-216ENST00000621396 RPL18AQ02543 176 aaKnown RBP10.32□□□□□ -0.76
CBWD3-216ENST00000621396 A0A1B0GV90 55 aa10.32□□□□□ -0.76
CBWD3-216ENST00000621396 NDUFC2-KCTD14E9PQ53 114 aa10.31□□□□□ -0.76
CBWD3-216ENST00000621396 DNAH17Q9UFH2 4485 aa10.3□□□□□ -0.76
CBWD3-216ENST00000621396 IGKV2-28A0A075B6P5 120 aa10.3□□□□□ -0.76
CBWD3-216ENST00000621396 A0A087WTM6 91 aa10.3□□□□□ -0.76
CBWD3-216ENST00000621396 IGKV2D-28P01615 120 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms