RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 CKS1BP61024 79 aa13.29□□□□□ -0.28
SRRT-218ENST00000620394 UBE2BP63146 152 aa13.29□□□□□ -0.28
SRRT-218ENST00000620394 UQCC3Q6UW78 93 aa13.29□□□□□ -0.28
SRRT-218ENST00000620394 PRR26Q8N8Z3 221 aa13.29□□□□□ -0.28
SRRT-218ENST00000620394 C6orf226Q5I0X4 101 aa13.28□□□□□ -0.28
SRRT-218ENST00000620394 ALKBH7Q9BT30 221 aaPredicted RBP13.28□□□□□ -0.28
SRRT-218ENST00000620394 KRTAP9-2Q9BYQ4 174 aa13.28□□□□□ -0.28
SRRT-218ENST00000620394 A0A0U1RQV1 116 aa13.27□□□□□ -0.29
SRRT-218ENST00000620394 KIAA1644Q3SXP7 199 aa13.27□□□□□ -0.29
SRRT-218ENST00000620394 ERASQ7Z444 233 aa13.27□□□□□ -0.29
SRRT-218ENST00000620394 IGLV1-50A0A075B6I6 118 aa13.26□□□□□ -0.29
SRRT-218ENST00000620394 TMEM218A2RU14 115 aa13.26□□□□□ -0.29
SRRT-218ENST00000620394 LINC01546A6NGU7 62 aa13.26□□□□□ -0.29
SRRT-218ENST00000620394 F8VRH5 84 aa13.26□□□□□ -0.29
SRRT-218ENST00000620394 CXCL5P42830 114 aa13.26□□□□□ -0.29
SRRT-218ENST00000620394 GEMIN7Q9H840 131 aaKnown RBP13.26□□□□□ -0.29
SRRT-218ENST00000620394 IGLV5-45A0A087WSX0 123 aa13.24□□□□□ -0.29
SRRT-218ENST00000620394 LINC01549A6NIU2 74 aa13.23□□□□□ -0.29
SRRT-218ENST00000620394 SMIM1B2RUZ4 78 aa13.23□□□□□ -0.29
SRRT-218ENST00000620394 LINC00469Q8N7U9 141 aa13.23□□□□□ -0.29
SRRT-218ENST00000620394 GNB1LQ9BYB4 327 aa13.23□□□□□ -0.29
SRRT-218ENST00000620394 SCGB3A1Q96QR1 104 aa13.22□□□□□ -0.29
SRRT-218ENST00000620394 SEC11CQ9BY50 192 aa13.22□□□□□ -0.29
SRRT-218ENST00000620394 XAGE1AQ9HD64 81 aa13.22□□□□□ -0.29
SRRT-218ENST00000620394 C22orf24Q9Y442 160 aa13.22□□□□□ -0.29
SRRT-218ENST00000620394 TINCRA0A1B0GVN0 87 aa13.21□□□□□ -0.29
SRRT-218ENST00000620394 IFITM2Q01629 132 aa13.21□□□□□ -0.29
SRRT-218ENST00000620394 TP73-AS1Q9UF72 201 aa13.21□□□□□ -0.29
SRRT-218ENST00000620394 NUPR1O60356 82 aa13.2□□□□□ -0.3
SRRT-218ENST00000620394 PDZD11Q5EBL8 140 aa13.2□□□□□ -0.3
SRRT-218ENST00000620394 MUC2Q02817 5179 aa13.18□□□□□ -0.3
SRRT-218ENST00000620394 ZNF861PO60384 105 aa13.18□□□□□ -0.3
SRRT-218ENST00000620394 S100PP25815 95 aa13.18□□□□□ -0.3
SRRT-218ENST00000620394 LBHQ53QV2 105 aaPredicted RBP13.18□□□□□ -0.3
SRRT-218ENST00000620394 RPL13AP40429 203 aaKnown RBP13.17□□□□□ -0.3
SRRT-218ENST00000620394 COX19Q49B96 90 aa13.17□□□□□ -0.3
SRRT-218ENST00000620394 COX7B2Q8TF08 81 aa13.17□□□□□ -0.3
SRRT-218ENST00000620394 CST9LQ9H4G1 147 aa13.17□□□□□ -0.3
SRRT-218ENST00000620394 MRPL55Q7Z7F7 128 aaKnown RBP13.16□□□□□ -0.3
SRRT-218ENST00000620394 CARHSP1Q9Y2V2 147 aaKnown RBP13.15□□□□□ -0.3
SRRT-218ENST00000620394 PMVKQ15126 192 aa13.14□□□□□ -0.31
SRRT-218ENST00000620394 PRR4Q16378 134 aa13.14□□□□□ -0.31
SRRT-218ENST00000620394 C10orf91Q5T1B1 145 aa13.12□□□□□ -0.31
SRRT-218ENST00000620394 FA2HQ7L5A8 372 aa13.12□□□□□ -0.31
SRRT-218ENST00000620394 MRPL18Q9H0U6 180 aaKnown RBP13.12□□□□□ -0.31
SRRT-218ENST00000620394 SPINK8P0C7L1 97 aa13.11□□□□□ -0.31
SRRT-218ENST00000620394 IGLV5-37A0A075B6J1 123 aa13.1□□□□□ -0.31
SRRT-218ENST00000620394 BCE1O60756 84 aa13.1□□□□□ -0.31
SRRT-218ENST00000620394 RHEBQ15382 184 aa13.1□□□□□ -0.31
SRRT-218ENST00000620394 SMCO4Q9NRQ5 59 aa13.1□□□□□ -0.31
SRRT-218ENST00000620394 COMMD7Q86VX2 200 aa13.09□□□□□ -0.31
SRRT-218ENST00000620394 A0A096LNJ9 63 aa13.08□□□□□ -0.32
SRRT-218ENST00000620394 IGLC3P0DOY3 106 aa13.08□□□□□ -0.32
SRRT-218ENST00000620394 RPL28P46779 137 aaKnown RBP13.08□□□□□ -0.32
SRRT-218ENST00000620394 FABP9Q0Z7S8 132 aa13.08□□□□□ -0.32
SRRT-218ENST00000620394 LINC00167Q96N53 147 aa13.08□□□□□ -0.32
SRRT-218ENST00000620394 IGLV5-39A0A0G2JS06 123 aa13.07□□□□□ -0.32
SRRT-218ENST00000620394 H3BRM9 83 aa13.07□□□□□ -0.32
SRRT-218ENST00000620394 URB1-AS1Q96HZ7 61 aa13.04□□□□□ -0.32
SRRT-218ENST00000620394 RPS10P5Q9NQ39 176 aa13.04□□□□□ -0.32
SRRT-218ENST00000620394 KRTAP9-6A0A140TA67 174 aa13.03□□□□□ -0.32
SRRT-218ENST00000620394 RPL37AP8A6NKH3 93 aa13.03□□□□□ -0.32
SRRT-218ENST00000620394 ATP5LO75964 103 aa13.03□□□□□ -0.32
SRRT-218ENST00000620394 LCE2AQ5TA79 106 aaPredicted RBP13.03□□□□□ -0.32
SRRT-218ENST00000620394 KRTAP13-1Q8IUC0 172 aa13.03□□□□□ -0.32
SRRT-218ENST00000620394 C18orf32Q8TCD1 76 aa13.03□□□□□ -0.32
SRRT-218ENST00000620394 ZNF22P17026 224 aaPredicted RBP13.02□□□□□ -0.33
SRRT-218ENST00000620394 RAB5BP61020 215 aa13.02□□□□□ -0.33
SRRT-218ENST00000620394 A0A087X002 238 aa13.01□□□□□ -0.33
SRRT-218ENST00000620394 NKAPP1Q8N9T2 125 aa13.01□□□□□ -0.33
SRRT-218ENST00000620394 GAGE10A6NGK3 116 aa13□□□□□ -0.33
SRRT-218ENST00000620394 HBDP02042 147 aa13□□□□□ -0.33
SRRT-218ENST00000620394 LINC00614P0C842 121 aa12.99□□□□□ -0.33
SRRT-218ENST00000620394 FAT4Q6V0I7 4981 aa12.98□□□□□ -0.33
SRRT-218ENST00000620394 TRAPPC1Q9Y5R8 145 aa12.98□□□□□ -0.33
SRRT-218ENST00000620394 CRYGAP11844 174 aa12.96□□□□□ -0.33
SRRT-218ENST00000620394 VPREB1P12018 145 aa12.96□□□□□ -0.33
SRRT-218ENST00000620394 ERG28Q9UKR5 140 aa12.96□□□□□ -0.33
SRRT-218ENST00000620394 PFN2P35080 140 aa12.95□□□□□ -0.34
SRRT-218ENST00000620394 NDUFA6P56556 154 aa12.95□□□□□ -0.34
SRRT-218ENST00000620394 COX17Q14061 63 aa12.95□□□□□ -0.34
SRRT-218ENST00000620394 SND1-IT1Q9HBX3 110 aa12.95□□□□□ -0.34
SRRT-218ENST00000620394 C11orf86A6NJI1 115 aa12.94□□□□□ -0.34
SRRT-218ENST00000620394 SCO1O75880 301 aa12.94□□□□□ -0.34
SRRT-218ENST00000620394 UBE2AP49459 152 aa12.94□□□□□ -0.34
SRRT-218ENST00000620394 PMCHL1Q16048 86 aa12.94□□□□□ -0.34
SRRT-218ENST00000620394 SFTA2Q6UW10 78 aa12.94□□□□□ -0.34
SRRT-218ENST00000620394 IGKV2-28A0A075B6P5 120 aa12.93□□□□□ -0.34
SRRT-218ENST00000620394 IGKV2D-28P01615 120 aa12.93□□□□□ -0.34
SRRT-218ENST00000620394 TYMSOSQ8TAI1 123 aa12.92□□□□□ -0.34
SRRT-218ENST00000620394 FAM229BQ4G0N7 80 aa12.91□□□□□ -0.34
SRRT-218ENST00000620394 ZNF625Q96I27 306 aaPredicted RBP12.91□□□□□ -0.34
SRRT-218ENST00000620394 KRTAP13-2Q52LG2 175 aa12.9□□□□□ -0.34
SRRT-218ENST00000620394 BAGE3Q86Y29 109 aa12.9□□□□□ -0.34
SRRT-218ENST00000620394 RPL24P83731 157 aaKnown RBP12.89□□□□□ -0.35
SRRT-218ENST00000620394 Q8NDZ9 215 aa12.89□□□□□ -0.35
SRRT-218ENST00000620394 TMEM126AQ9H061 195 aa12.89□□□□□ -0.35
SRRT-218ENST00000620394 TSPAN13O95857 204 aa12.88□□□□□ -0.35
SRRT-218ENST00000620394 TMEM170BQ5T4T1 132 aa12.88□□□□□ -0.35
SRRT-218ENST00000620394 ANAPC11Q9NYG5 84 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms