RNA–Protein interactions for RNA: ENST00000619976.1

SYNRG-227, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 1,375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-227ENST00000619976 PSORS1C2Q9UIG4 136 aa17.15■□□□□ 0.34
SYNRG-227ENST00000619976 CKS1BP61024 79 aa17.15■□□□□ 0.34
SYNRG-227ENST00000619976 SMCO4Q9NRQ5 59 aa17.15■□□□□ 0.34
SYNRG-227ENST00000619976 NDUFC2-KCTD14E9PQ53 114 aa17.14■□□□□ 0.33
SYNRG-227ENST00000619976 APOC3P02656 99 aa17.13■□□□□ 0.33
SYNRG-227ENST00000619976 FAM19A5Q7Z5A7 132 aaPredicted RBP17.13■□□□□ 0.33
SYNRG-227ENST00000619976 LINC01600Q96MT4 127 aa17.13■□□□□ 0.33
SYNRG-227ENST00000619976 LINC00469Q8N7U9 141 aa17.11■□□□□ 0.33
SYNRG-227ENST00000619976 TINCRA0A1B0GVN0 87 aa17.1■□□□□ 0.33
SYNRG-227ENST00000619976 REG3GQ6UW15 175 aa17.1■□□□□ 0.33
SYNRG-227ENST00000619976 TRAPPC1Q9Y5R8 145 aa17.1■□□□□ 0.33
SYNRG-227ENST00000619976 CST9LQ9H4G1 147 aa17.09■□□□□ 0.33
SYNRG-227ENST00000619976 NDUFA5Q16718 116 aa17.08■□□□□ 0.32
SYNRG-227ENST00000619976 C1orf137Q5JT78 98 aa17.08■□□□□ 0.32
SYNRG-227ENST00000619976 KRTAP7-1Q8IUC3 87 aa17.08■□□□□ 0.32
SYNRG-227ENST00000619976 SNAPINO95295 136 aa17.07■□□□□ 0.32
SYNRG-227ENST00000619976 C9orf129Q5T035 196 aaKnown RBP17.07■□□□□ 0.32
SYNRG-227ENST00000619976 SVBPQ8N300 66 aa17.07■□□□□ 0.32
SYNRG-227ENST00000619976 PLA2G2DQ9UNK4 145 aa17.07■□□□□ 0.32
SYNRG-227ENST00000619976 PMVKQ15126 192 aa17.06■□□□□ 0.32
SYNRG-227ENST00000619976 IGLV5-45A0A087WSX0 123 aa17.05■□□□□ 0.32
SYNRG-227ENST00000619976 SMIM1B2RUZ4 78 aa17.05■□□□□ 0.32
SYNRG-227ENST00000619976 C18orf32Q8TCD1 76 aa17.05■□□□□ 0.32
SYNRG-227ENST00000619976 F8VRH5 84 aa17.04■□□□□ 0.32
SYNRG-227ENST00000619976 M0QXV9 152 aa17.04■□□□□ 0.32
SYNRG-227ENST00000619976 KRTAP11-1Q8IUC1 163 aa17.04■□□□□ 0.32
SYNRG-227ENST00000619976 PDZD11Q5EBL8 140 aa17.03■□□□□ 0.32
SYNRG-227ENST00000619976 CXCL5P42830 114 aa17.02■□□□□ 0.32
SYNRG-227ENST00000619976 URB1-AS1Q96HZ7 61 aa17.02■□□□□ 0.32
SYNRG-227ENST00000619976 A0A096LNJ9 63 aa17.02■□□□□ 0.31
SYNRG-227ENST00000619976 LINC00614P0C842 121 aa17.02■□□□□ 0.31
SYNRG-227ENST00000619976 COX7B2Q8TF08 81 aa17.01■□□□□ 0.31
SYNRG-227ENST00000619976 TNXBP22105 4242 aa16.99■□□□□ 0.31
SYNRG-227ENST00000619976 IGLV7-43P04211 117 aa16.99■□□□□ 0.31
SYNRG-227ENST00000619976 SPINK8P0C7L1 97 aa16.99■□□□□ 0.31
SYNRG-227ENST00000619976 UBE2BP63146 152 aa16.99■□□□□ 0.31
SYNRG-227ENST00000619976 KRTAP10-8P60410 259 aa16.98■□□□□ 0.31
SYNRG-227ENST00000619976 XAGE1AQ9HD64 81 aa16.97■□□□□ 0.31
SYNRG-227ENST00000619976 HMCN2Q8NDA2 5059 aa16.96■□□□□ 0.31
SYNRG-227ENST00000619976 HBDP02042 147 aa16.96■□□□□ 0.31
SYNRG-227ENST00000619976 NDUFA6P56556 154 aa16.96■□□□□ 0.31
SYNRG-227ENST00000619976 PMCHL1Q16048 86 aa16.95■□□□□ 0.3
SYNRG-227ENST00000619976 H3BRM9 83 aa16.94■□□□□ 0.3
SYNRG-227ENST00000619976 RAB5BP61020 215 aa16.94■□□□□ 0.3
SYNRG-227ENST00000619976 IGLC3P0DOY3 106 aa16.93■□□□□ 0.3
SYNRG-227ENST00000619976 YPEL4Q96NS1 127 aa16.93■□□□□ 0.3
SYNRG-227ENST00000619976 DIRC1Q969H9 104 aa16.92■□□□□ 0.3
SYNRG-227ENST00000619976 C22orf24Q9Y442 160 aa16.91■□□□□ 0.3
SYNRG-227ENST00000619976 ODF1Q14990 250 aa16.89■□□□□ 0.3
SYNRG-227ENST00000619976 ATP5LO75964 103 aa16.89■□□□□ 0.29
SYNRG-227ENST00000619976 ZNF22P17026 224 aaPredicted RBP16.87■□□□□ 0.29
SYNRG-227ENST00000619976 LBHQ53QV2 105 aaPredicted RBP16.87■□□□□ 0.29
SYNRG-227ENST00000619976 IGLV5-39A0A0G2JS06 123 aa16.86■□□□□ 0.29
SYNRG-227ENST00000619976 H0Y9J4 135 aa16.86■□□□□ 0.29
SYNRG-227ENST00000619976 BAGE3Q86Y29 109 aa16.85■□□□□ 0.29
SYNRG-227ENST00000619976 TP73-AS1Q9UF72 201 aa16.85■□□□□ 0.29
SYNRG-227ENST00000619976 MRPL55Q7Z7F7 128 aaKnown RBP16.82■□□□□ 0.28
SYNRG-227ENST00000619976 CBLN2Q8IUK8 224 aa16.82■□□□□ 0.28
SYNRG-227ENST00000619976 C11orf86A6NJI1 115 aa16.81■□□□□ 0.28
SYNRG-227ENST00000619976 CHCHD1Q96BP2 118 aaKnown RBP16.81■□□□□ 0.28
SYNRG-227ENST00000619976 NUPR1O60356 82 aa16.79■□□□□ 0.28
SYNRG-227ENST00000619976 TMEM170BQ5T4T1 132 aa16.78■□□□□ 0.28
SYNRG-227ENST00000619976 CHTOPQ9Y3Y2 248 aaKnown RBP16.77■□□□□ 0.28
SYNRG-227ENST00000619976 PRR26Q8N8Z3 221 aa16.77■□□□□ 0.27
SYNRG-227ENST00000619976 PFN2P35080 140 aa16.76■□□□□ 0.27
SYNRG-227ENST00000619976 LINC00167Q96N53 147 aa16.76■□□□□ 0.27
SYNRG-227ENST00000619976 ZNF861PO60384 105 aa16.75■□□□□ 0.27
SYNRG-227ENST00000619976 IFI27L1Q96BM0 104 aa16.75■□□□□ 0.27
SYNRG-227ENST00000619976 IGLV5-37A0A075B6J1 123 aa16.74■□□□□ 0.27
SYNRG-227ENST00000619976 KRTAP1-4P0C5Y4 121 aa16.73■□□□□ 0.27
SYNRG-227ENST00000619976 ERG28Q9UKR5 140 aa16.73■□□□□ 0.27
SYNRG-227ENST00000619976 TRAV12-1A0A0B4J245 112 aa16.72■□□□□ 0.27
SYNRG-227ENST00000619976 RPL37AP8A6NKH3 93 aa16.72■□□□□ 0.27
SYNRG-227ENST00000619976 NKAPP1Q8N9T2 125 aa16.72■□□□□ 0.27
SYNRG-227ENST00000619976 GAGE10A6NGK3 116 aa16.71■□□□□ 0.27
SYNRG-227ENST00000619976 SLC7A5P1Q8MH63 180 aa16.71■□□□□ 0.27
SYNRG-227ENST00000619976 ZNF625Q96I27 306 aaPredicted RBP16.71■□□□□ 0.27
SYNRG-227ENST00000619976 HSBP1O75506 76 aa16.7■□□□□ 0.26
SYNRG-227ENST00000619976 TRGC2P03986 189 aa16.7■□□□□ 0.26
SYNRG-227ENST00000619976 IGLV1-50A0A075B6I6 118 aa16.69■□□□□ 0.26
SYNRG-227ENST00000619976 BCE1O60756 84 aa16.69■□□□□ 0.26
SYNRG-227ENST00000619976 COX17Q14061 63 aa16.69■□□□□ 0.26
SYNRG-227ENST00000619976 SFTA2Q6UW10 78 aa16.69■□□□□ 0.26
SYNRG-227ENST00000619976 FAM19A2Q8N3H0 131 aa16.68■□□□□ 0.26
SYNRG-227ENST00000619976 SND1-IT1Q9HBX3 110 aa16.68■□□□□ 0.26
SYNRG-227ENST00000619976 TMEM223A0PJW6 202 aa16.66■□□□□ 0.26
SYNRG-227ENST00000619976 RPL28P46779 137 aaKnown RBP16.65■□□□□ 0.26
SYNRG-227ENST00000619976 SCO1O75880 301 aa16.64■□□□□ 0.25
SYNRG-227ENST00000619976 VPREB1P12018 145 aa16.63■□□□□ 0.25
SYNRG-227ENST00000619976 UBR4Q5T4S7 5183 aa16.61■□□□□ 0.25
SYNRG-227ENST00000619976 IGKV2-28A0A075B6P5 120 aa16.6■□□□□ 0.25
SYNRG-227ENST00000619976 SERF1AO75920 110 aa16.6■□□□□ 0.25
SYNRG-227ENST00000619976 IGKV2D-28P01615 120 aa16.6■□□□□ 0.25
SYNRG-227ENST00000619976 RPL13AP40429 203 aaKnown RBP16.6■□□□□ 0.25
SYNRG-227ENST00000619976 RPL24P83731 157 aaKnown RBP16.6■□□□□ 0.25
SYNRG-227ENST00000619976 LINC00310P59036 64 aa16.59■□□□□ 0.25
SYNRG-227ENST00000619976 LINC00158P58513 81 aa16.58■□□□□ 0.24
SYNRG-227ENST00000619976 H0Y8G0 127 aa16.57■□□□□ 0.24
SYNRG-227ENST00000619976 COLCA2A8K830 154 aa16.56■□□□□ 0.24
SYNRG-227ENST00000619976 LEPROTL1O95214 131 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms