RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 LRP2P98164 4655 aa13.47□□□□□ -0.25
TRAF4-217ENST00000618771 NDUFC2-KCTD14E9PQ53 114 aa13.47□□□□□ -0.25
TRAF4-217ENST00000618771 CKS1BP61024 79 aa13.47□□□□□ -0.25
TRAF4-217ENST00000618771 FABP9Q0Z7S8 132 aa13.47□□□□□ -0.25
TRAF4-217ENST00000618771 FAM19A5Q7Z5A7 132 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-217ENST00000618771 LINC01549A6NIU2 74 aa13.46□□□□□ -0.25
TRAF4-217ENST00000618771 Q8IZM0 81 aa13.46□□□□□ -0.25
TRAF4-217ENST00000618771 TNXBP22105 4242 aa13.46□□□□□ -0.25
TRAF4-217ENST00000618771 C6orf226Q5I0X4 101 aa13.45□□□□□ -0.26
TRAF4-217ENST00000618771 FA2HQ7L5A8 372 aa13.45□□□□□ -0.26
TRAF4-217ENST00000618771 RNF213Q63HN8 5207 aa13.45□□□□□ -0.26
TRAF4-217ENST00000618771 C1orf137Q5JT78 98 aa13.44□□□□□ -0.26
TRAF4-217ENST00000618771 SMCO4Q9NRQ5 59 aa13.44□□□□□ -0.26
TRAF4-217ENST00000618771 LINC00469Q8N7U9 141 aa13.43□□□□□ -0.26
TRAF4-217ENST00000618771 KRTAP7-1Q8IUC3 87 aa13.42□□□□□ -0.26
TRAF4-217ENST00000618771 C9orf129Q5T035 196 aaKnown RBP13.41□□□□□ -0.26
TRAF4-217ENST00000618771 TINCRA0A1B0GVN0 87 aa13.4□□□□□ -0.26
TRAF4-217ENST00000618771 M0QXV9 152 aa13.4□□□□□ -0.26
TRAF4-217ENST00000618771 CST9LQ9H4G1 147 aa13.4□□□□□ -0.26
TRAF4-217ENST00000618771 KRTAP11-1Q8IUC1 163 aa13.39□□□□□ -0.27
TRAF4-217ENST00000618771 IGLV5-45A0A087WSX0 123 aa13.38□□□□□ -0.27
TRAF4-217ENST00000618771 SMIM1B2RUZ4 78 aa13.38□□□□□ -0.27
TRAF4-217ENST00000618771 F8VRH5 84 aa13.38□□□□□ -0.27
TRAF4-217ENST00000618771 APOC3P02656 99 aa13.38□□□□□ -0.27
TRAF4-217ENST00000618771 CXCL5P42830 114 aa13.38□□□□□ -0.27
TRAF4-217ENST00000618771 PMVKQ15126 192 aa13.38□□□□□ -0.27
TRAF4-217ENST00000618771 TRAPPC1Q9Y5R8 145 aa13.38□□□□□ -0.27
TRAF4-217ENST00000618771 IGLV7-43P04211 117 aa13.37□□□□□ -0.27
TRAF4-217ENST00000618771 UBE2BP63146 152 aa13.36□□□□□ -0.27
TRAF4-217ENST00000618771 NDUFA5Q16718 116 aa13.36□□□□□ -0.27
TRAF4-217ENST00000618771 PDZD11Q5EBL8 140 aa13.36□□□□□ -0.27
TRAF4-217ENST00000618771 SNAPINO95295 136 aa13.35□□□□□ -0.27
TRAF4-217ENST00000618771 KRTAP10-8P60410 259 aa13.35□□□□□ -0.27
TRAF4-217ENST00000618771 C18orf32Q8TCD1 76 aa13.35□□□□□ -0.27
TRAF4-217ENST00000618771 SVBPQ8N300 66 aa13.34□□□□□ -0.27
TRAF4-217ENST00000618771 COX7B2Q8TF08 81 aa13.34□□□□□ -0.27
TRAF4-217ENST00000618771 XAGE1AQ9HD64 81 aa13.34□□□□□ -0.27
TRAF4-217ENST00000618771 A0A096LNJ9 63 aa13.32□□□□□ -0.28
TRAF4-217ENST00000618771 SPINK8P0C7L1 97 aa13.32□□□□□ -0.28
TRAF4-217ENST00000618771 LINC00614P0C842 121 aa13.32□□□□□ -0.28
TRAF4-217ENST00000618771 ODF1Q14990 250 aa13.32□□□□□ -0.28
TRAF4-217ENST00000618771 DIRC1Q969H9 104 aa13.32□□□□□ -0.28
TRAF4-217ENST00000618771 URB1-AS1Q96HZ7 61 aa13.32□□□□□ -0.28
TRAF4-217ENST00000618771 H3BRM9 83 aa13.3□□□□□ -0.28
TRAF4-217ENST00000618771 HBDP02042 147 aa13.3□□□□□ -0.28
TRAF4-217ENST00000618771 NDUFA6P56556 154 aa13.29□□□□□ -0.28
TRAF4-217ENST00000618771 IGLC3P0DOY3 106 aa13.28□□□□□ -0.28
TRAF4-217ENST00000618771 PMCHL1Q16048 86 aa13.28□□□□□ -0.28
TRAF4-217ENST00000618771 C22orf24Q9Y442 160 aa13.28□□□□□ -0.28
TRAF4-217ENST00000618771 H0Y9J4 135 aa13.27□□□□□ -0.29
TRAF4-217ENST00000618771 RAB5BP61020 215 aa13.26□□□□□ -0.29
TRAF4-217ENST00000618771 LBHQ53QV2 105 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-217ENST00000618771 ATP5LO75964 103 aa13.24□□□□□ -0.29
TRAF4-217ENST00000618771 TP73-AS1Q9UF72 201 aa13.24□□□□□ -0.29
TRAF4-217ENST00000618771 ZNF22P17026 224 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-217ENST00000618771 YPEL4Q96NS1 127 aa13.23□□□□□ -0.29
TRAF4-217ENST00000618771 IGLV5-39A0A0G2JS06 123 aa13.22□□□□□ -0.29
TRAF4-217ENST00000618771 MRPL55Q7Z7F7 128 aaKnown RBP13.22□□□□□ -0.29
TRAF4-217ENST00000618771 NUPR1O60356 82 aa13.21□□□□□ -0.29
TRAF4-217ENST00000618771 BAGE3Q86Y29 109 aa13.2□□□□□ -0.3
TRAF4-217ENST00000618771 PRR26Q8N8Z3 221 aa13.2□□□□□ -0.3
TRAF4-217ENST00000618771 C11orf86A6NJI1 115 aa13.18□□□□□ -0.3
TRAF4-217ENST00000618771 ZNF861PO60384 105 aa13.17□□□□□ -0.3
TRAF4-217ENST00000618771 KRTAP1-4P0C5Y4 121 aa13.17□□□□□ -0.3
TRAF4-217ENST00000618771 CHCHD1Q96BP2 118 aaKnown RBP13.17□□□□□ -0.3
TRAF4-217ENST00000618771 PFN2P35080 140 aa13.16□□□□□ -0.3
TRAF4-217ENST00000618771 TMEM170BQ5T4T1 132 aa13.16□□□□□ -0.3
TRAF4-217ENST00000618771 LINC00167Q96N53 147 aa13.16□□□□□ -0.3
TRAF4-217ENST00000618771 IGLV1-50A0A075B6I6 118 aa13.15□□□□□ -0.3
TRAF4-217ENST00000618771 IGLV5-37A0A075B6J1 123 aa13.14□□□□□ -0.31
TRAF4-217ENST00000618771 RPL37AP8A6NKH3 93 aa13.14□□□□□ -0.31
TRAF4-217ENST00000618771 CBLN2Q8IUK8 224 aa13.14□□□□□ -0.31
TRAF4-217ENST00000618771 NKAPP1Q8N9T2 125 aa13.14□□□□□ -0.31
TRAF4-217ENST00000618771 CHTOPQ9Y3Y2 248 aaKnown RBP13.14□□□□□ -0.31
TRAF4-217ENST00000618771 GAGE10A6NGK3 116 aa13.13□□□□□ -0.31
TRAF4-217ENST00000618771 ERG28Q9UKR5 140 aa13.13□□□□□ -0.31
TRAF4-217ENST00000618771 BCE1O60756 84 aa13.12□□□□□ -0.31
TRAF4-217ENST00000618771 IFI27L1Q96BM0 104 aa13.12□□□□□ -0.31
TRAF4-217ENST00000618771 ZNF625Q96I27 306 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-217ENST00000618771 RPL28P46779 137 aaKnown RBP13.1□□□□□ -0.31
TRAF4-217ENST00000618771 COX17Q14061 63 aa13.1□□□□□ -0.31
TRAF4-217ENST00000618771 SFTA2Q6UW10 78 aa13.1□□□□□ -0.31
TRAF4-217ENST00000618771 SND1-IT1Q9HBX3 110 aa13.1□□□□□ -0.31
TRAF4-217ENST00000618771 TRAV12-1A0A0B4J245 112 aa13.09□□□□□ -0.31
TRAF4-217ENST00000618771 HSBP1O75506 76 aa13.08□□□□□ -0.32
TRAF4-217ENST00000618771 RPL13AP40429 203 aaKnown RBP13.08□□□□□ -0.32
TRAF4-217ENST00000618771 SCO1O75880 301 aa13.07□□□□□ -0.32
TRAF4-217ENST00000618771 FAM19A2Q8N3H0 131 aa13.06□□□□□ -0.32
TRAF4-217ENST00000618771 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
TRAF4-217ENST00000618771 TRGC2P03986 189 aa13.05□□□□□ -0.32
TRAF4-217ENST00000618771 VPREB1P12018 145 aa13.05□□□□□ -0.32
TRAF4-217ENST00000618771 IGKV2-28A0A075B6P5 120 aa13.03□□□□□ -0.32
TRAF4-217ENST00000618771 IGKV2D-28P01615 120 aa13.03□□□□□ -0.32
TRAF4-217ENST00000618771 RPL24P83731 157 aaKnown RBP13.03□□□□□ -0.32
TRAF4-217ENST00000618771 LPAP08519 4548 aa13.02□□□□□ -0.32
TRAF4-217ENST00000618771 UBE2AP49459 152 aa13.02□□□□□ -0.33
TRAF4-217ENST00000618771 SLC7A5P1Q8MH63 180 aa13.02□□□□□ -0.33
TRAF4-217ENST00000618771 LINC00158P58513 81 aa13.01□□□□□ -0.33
TRAF4-217ENST00000618771 KRTAP13-1Q8IUC0 172 aa13□□□□□ -0.33
TRAF4-217ENST00000618771 SERF1AO75920 110 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms