RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 C6orf226Q5I0X4 101 aa14.18□□□□□ -0.14
NEK3-208ENST00000618534 XCL1P47992 114 aa14.17□□□□□ -0.14
NEK3-208ENST00000618534 SLPIP03973 132 aa14.16□□□□□ -0.14
NEK3-208ENST00000618534 OBSCN-AS1Q96MR7 158 aa14.15□□□□□ -0.14
NEK3-208ENST00000618534 GYPEP15421 78 aa14.15□□□□□ -0.14
NEK3-208ENST00000618534 CLPSL2Q6UWE3 100 aa14.15□□□□□ -0.14
NEK3-208ENST00000618534 LY6G6DO95868 133 aa14.14□□□□□ -0.15
NEK3-208ENST00000618534 NCR3O14931 201 aa14.13□□□□□ -0.15
NEK3-208ENST00000618534 C3orf22Q8N5N4 141 aa14.13□□□□□ -0.15
NEK3-208ENST00000618534 C16orf95Q9H693 158 aa14.13□□□□□ -0.15
NEK3-208ENST00000618534 KLK5Q9Y337 293 aaPredicted RBP14.13□□□□□ -0.15
NEK3-208ENST00000618534 C9orf153Q5TBE3 101 aa14.12□□□□□ -0.15
NEK3-208ENST00000618534 SS18Q15532 418 aa14.12□□□□□ -0.15
NEK3-208ENST00000618534 TMEM126AQ9H061 195 aa14.12□□□□□ -0.15
NEK3-208ENST00000618534 FN1P02751 2386 aaKnown RBP14.11□□□□□ -0.15
NEK3-208ENST00000618534 RNASE1P07998 156 aaKnown RBP14.11□□□□□ -0.15
NEK3-208ENST00000618534 LINC00846Q9NV44 126 aa14.11□□□□□ -0.15
NEK3-208ENST00000618534 Q8IZM0 81 aa14.11□□□□□ -0.15
NEK3-208ENST00000618534 KIR2DL5BQ8NHK3 375 aa14.11□□□□□ -0.15
NEK3-208ENST00000618534 A0A096LPF7 62 aa14.1□□□□□ -0.15
NEK3-208ENST00000618534 UQCRQO14949 82 aa14.1□□□□□ -0.15
NEK3-208ENST00000618534 MTORP42345 2549 aa14.09□□□□□ -0.15
NEK3-208ENST00000618534 LINC00612Q8N6U2 182 aa14.09□□□□□ -0.15
NEK3-208ENST00000618534 IGKV3D-7A0A0C4DH55 119 aa14.09□□□□□ -0.15
NEK3-208ENST00000618534 A0A1B0GUV1 79 aa14.09□□□□□ -0.15
NEK3-208ENST00000618534 HIST1H4AP62805 103 aaKnown RBP14.09□□□□□ -0.15
NEK3-208ENST00000618534 KRTAP1-1Q07627 177 aa14.08□□□□□ -0.16
NEK3-208ENST00000618534 ORMDL1Q9P0S3 153 aa14.08□□□□□ -0.16
NEK3-208ENST00000618534 ACANP16112 2415 aa14.08□□□□□ -0.16
NEK3-208ENST00000618534 PRR3P79522 188 aaKnown RBP14.07□□□□□ -0.16
NEK3-208ENST00000618534 LINC00526Q96FQ7 95 aa14.07□□□□□ -0.16
NEK3-208ENST00000618534 NANOS2P60321 138 aaKnown RBP14.06□□□□□ -0.16
NEK3-208ENST00000618534 Q6JHZ5 121 aa14.05□□□□□ -0.16
NEK3-208ENST00000618534 GCN1Q92616 2671 aaKnown RBP14.05□□□□□ -0.16
NEK3-208ENST00000618534 COX7CP15954 63 aa14.04□□□□□ -0.16
NEK3-208ENST00000618534 C2orf48Q96LS8 159 aa14.04□□□□□ -0.16
NEK3-208ENST00000618534 PRO0255Q9UI72 69 aa14.03□□□□□ -0.16
NEK3-208ENST00000618534 X6R8D5 127 aa14.03□□□□□ -0.16
NEK3-208ENST00000618534 ATOX1O00244 68 aa14.02□□□□□ -0.16
NEK3-208ENST00000618534 LINC01561Q8N1V8 128 aa14.02□□□□□ -0.16
NEK3-208ENST00000618534 KIAA0087Q14695 138 aa14.02□□□□□ -0.17
NEK3-208ENST00000618534 LINC00269Q8N2A0 174 aa14.02□□□□□ -0.17
NEK3-208ENST00000618534 LINC00167Q96N53 147 aa14.02□□□□□ -0.17
NEK3-208ENST00000618534 Q8N3U1 123 aa14.01□□□□□ -0.17
NEK3-208ENST00000618534 NBEAL2Q6ZNJ1 2754 aa14□□□□□ -0.17
NEK3-208ENST00000618534 A0A087WVE0 104 aa14□□□□□ -0.17
NEK3-208ENST00000618534 Q8N814 137 aa14□□□□□ -0.17
NEK3-208ENST00000618534 ANK3Q12955 4377 aaKnown RBP14□□□□□ -0.17
NEK3-208ENST00000618534 IGLV10-54A0A075B6I4 117 aa14□□□□□ -0.17
NEK3-208ENST00000618534 RPL18AQ02543 176 aaKnown RBP14□□□□□ -0.17
NEK3-208ENST00000618534 C9orf116Q5BN46 136 aaPredicted RBP13.99□□□□□ -0.17
NEK3-208ENST00000618534 CCKP06307 115 aa13.99□□□□□ -0.17
NEK3-208ENST00000618534 CFAP161Q6P656 301 aa13.99□□□□□ -0.17
NEK3-208ENST00000618534 CD164L2Q6UWJ8 174 aa13.99□□□□□ -0.17
NEK3-208ENST00000618534 CHCHD10Q8WYQ3 142 aaPredicted RBP13.98□□□□□ -0.17
NEK3-208ENST00000618534 NDUFC2O95298 119 aa13.98□□□□□ -0.17
NEK3-208ENST00000618534 A0A1B0GX51 115 aa13.96□□□□□ -0.17
NEK3-208ENST00000618534 Q8NDZ9 215 aa13.96□□□□□ -0.17
NEK3-208ENST00000618534 KRTAP10-3P60369 221 aa13.96□□□□□ -0.17
NEK3-208ENST00000618534 COX17Q14061 63 aa13.95□□□□□ -0.18
NEK3-208ENST00000618534 PDZD2O15018 2839 aa13.95□□□□□ -0.18
NEK3-208ENST00000618534 DEFB4AO15263 64 aa13.95□□□□□ -0.18
NEK3-208ENST00000618534 ANGP03950 147 aaKnown RBP13.95□□□□□ -0.18
NEK3-208ENST00000618534 CRYGAP11844 174 aa13.95□□□□□ -0.18
NEK3-208ENST00000618534 HILS1P60008 231 aa13.94□□□□□ -0.18
NEK3-208ENST00000618534 SMIM9A6NGZ8 99 aa13.94□□□□□ -0.18
NEK3-208ENST00000618534 JMJD7-PLA2G4BH0Y9G9 81 aa13.94□□□□□ -0.18
NEK3-208ENST00000618534 REG3AQ06141 175 aa13.93□□□□□ -0.18
NEK3-208ENST00000618534 LINC00482Q8N8I6 264 aa13.93□□□□□ -0.18
NEK3-208ENST00000618534 hADV29S1A0JD25 119 aa13.93□□□□□ -0.18
NEK3-208ENST00000618534 TMEM256-PLSCR3K7ERE1 68 aa13.93□□□□□ -0.18
NEK3-208ENST00000618534 C6orf99Q4VX62 202 aa13.93□□□□□ -0.18
NEK3-208ENST00000618534 IGHV4-28A0A0C4DH34 117 aa13.92□□□□□ -0.18
NEK3-208ENST00000618534 CYSTM1Q9H1C7 97 aa13.92□□□□□ -0.18
NEK3-208ENST00000618534 TENM4Q6N022 2769 aa13.91□□□□□ -0.18
NEK3-208ENST00000618534 LYRM9A8MSI8 78 aa13.9□□□□□ -0.18
NEK3-208ENST00000618534 USP17L23D6RBM5 183 aa13.9□□□□□ -0.18
NEK3-208ENST00000618534 DEFB135Q30KP9 77 aa13.89□□□□□ -0.19
NEK3-208ENST00000618534 SERP2Q8N6R1 65 aa13.89□□□□□ -0.19
NEK3-208ENST00000618534 SPATA3Q8NHX4 192 aa13.89□□□□□ -0.19
NEK3-208ENST00000618534 S100A7L2Q5SY68 101 aa13.88□□□□□ -0.19
NEK3-208ENST00000618534 C10orf25Q5T742 122 aa13.88□□□□□ -0.19
NEK3-208ENST00000618534 C6orf223Q8N319 242 aa13.88□□□□□ -0.19
NEK3-208ENST00000618534 UNQ6190/PRO20217Q6UXQ8 127 aa13.86□□□□□ -0.19
NEK3-208ENST00000618534 WFDC9Q8NEX5 89 aa13.86□□□□□ -0.19
NEK3-208ENST00000618534 LINC00575Q6W349 94 aa13.85□□□□□ -0.19
NEK3-208ENST00000618534 VWFP04275 2813 aa13.85□□□□□ -0.19
NEK3-208ENST00000618534 ITPR2Q14571 2701 aa13.85□□□□□ -0.19
NEK3-208ENST00000618534 UPK3BQ9BT76 320 aa13.84□□□□□ -0.19
NEK3-208ENST00000618534 LOC107984640A0A0U1RRK4 108 aa13.84□□□□□ -0.19
NEK3-208ENST00000618534 DAD1P61803 113 aa13.84□□□□□ -0.19
NEK3-208ENST00000618534 SPAG11BQ08648 103 aa13.84□□□□□ -0.19
NEK3-208ENST00000618534 CELA1Q9UNI1 258 aa13.83□□□□□ -0.2
NEK3-208ENST00000618534 ATP5EP2Q5VTU8 51 aa13.82□□□□□ -0.2
NEK3-208ENST00000618534 SMR3AQ99954 134 aa13.82□□□□□ -0.2
NEK3-208ENST00000618534 FAM19A1Q7Z5A9 133 aa13.81□□□□□ -0.2
NEK3-208ENST00000618534 ENHOQ6UWT2 76 aa13.8□□□□□ -0.2
NEK3-208ENST00000618534 CYSRT1A8MQ03 144 aa13.8□□□□□ -0.2
NEK3-208ENST00000618534 LYPD5Q6UWN5 251 aa13.8□□□□□ -0.2
NEK3-208ENST00000618534 UBL5Q9BZL1 73 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms