RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 AKAP6Q13023 2319 aa4.83□□□□□ -1.64
CDKAL1-204ENST00000613575 LRRK2Q5S007 2527 aa4.82□□□□□ -1.64
CDKAL1-204ENST00000613575 COX7A2LO14548 114 aa4.82□□□□□ -1.64
CDKAL1-204ENST00000613575 Q6YL49 198 aa4.82□□□□□ -1.64
CDKAL1-204ENST00000613575 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.82□□□□□ -1.64
CDKAL1-204ENST00000613575 OVOL2Q9BRP0 275 aa4.82□□□□□ -1.64
CDKAL1-204ENST00000613575 NACAE9PAV3 2078 aa4.81□□□□□ -1.64
CDKAL1-204ENST00000613575 GNRH2O43555 120 aa4.81□□□□□ -1.64
CDKAL1-204ENST00000613575 IGHV4-59P01825 116 aa4.81□□□□□ -1.64
CDKAL1-204ENST00000613575 RNASE4P34096 147 aaKnown RBP4.81□□□□□ -1.64
CDKAL1-204ENST00000613575 SUMO2P61956 95 aaKnown RBP4.81□□□□□ -1.64
CDKAL1-204ENST00000613575 KRTAP1-1Q07627 177 aa4.81□□□□□ -1.64
CDKAL1-204ENST00000613575 ZNF876PQ49A33 203 aa4.81□□□□□ -1.64
CDKAL1-204ENST00000613575 SMIM2Q9BVW6 85 aa4.81□□□□□ -1.64
CDKAL1-204ENST00000613575 FAM30AQ9NZY2 134 aa4.81□□□□□ -1.64
CDKAL1-204ENST00000613575 NBEAL1Q6ZS30 2694 aa4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 F6UB75 175 aa4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 S100A4P26447 101 aaKnown RBP4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 SOSTDC1Q6X4U4 206 aa4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 LCA10Q71F78 164 aa4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 PHF5AQ7RTV0 110 aaKnown RBP4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 C14orf178Q8N769 122 aaPredicted RBP4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 SPATA3Q8NHX4 192 aa4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 AMELXQ99217 191 aa4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 PHLDA3Q9Y5J5 127 aa4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 FN1P02751 2386 aaKnown RBP4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 F8P00451 2351 aa4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 TRAV23DV6A0A075B6W5 121 aa4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 K7EQG2 157 aa4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 POLR2KP53803 58 aaKnown RBP4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 DEFB1P60022 68 aa4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 KRTAP10-2P60368 255 aa4.8□□□□□ -1.64
CDKAL1-204ENST00000613575 TRBV6-5A0A0K0K1A5 114 aa4.79□□□□□ -1.64
CDKAL1-204ENST00000613575 RPL28P46779 137 aaKnown RBP4.79□□□□□ -1.64
CDKAL1-204ENST00000613575 TMEM141Q96I45 108 aa4.79□□□□□ -1.64
CDKAL1-204ENST00000613575 ZNF702PQ9H963 129 aa4.79□□□□□ -1.64
CDKAL1-204ENST00000613575 SVEP1Q4LDE5 3571 aa4.78□□□□□ -1.64
CDKAL1-204ENST00000613575 CSMD1Q96PZ7 3565 aa4.78□□□□□ -1.64
CDKAL1-204ENST00000613575 IGIPA6NJ69 53 aa4.78□□□□□ -1.64
CDKAL1-204ENST00000613575 A8MTW9 85 aa4.78□□□□□ -1.64
CDKAL1-204ENST00000613575 IGHV4-31P0DP07 118 aa4.78□□□□□ -1.64
CDKAL1-204ENST00000613575 MIFP14174 115 aa4.78□□□□□ -1.64
CDKAL1-204ENST00000613575 TSPEAR-AS2P59090 65 aa4.78□□□□□ -1.64
CDKAL1-204ENST00000613575 RMI2Q96E14 147 aa4.78□□□□□ -1.64
CDKAL1-204ENST00000613575 ITPR2Q14571 2701 aa4.78□□□□□ -1.64
CDKAL1-204ENST00000613575 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.78□□□□□ -1.645e-9■■■■□ 26.5
CDKAL1-204ENST00000613575 IGLV4-69A0A075B6H9 119 aa4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 IGHV3-16A0A0C4DH30 117 aa4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 VCYO14598 125 aa4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 ERC2-IT1O76042 136 aa4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 FUSP35637 526 aaKnown RBP eCLIP4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 FAM229BQ4G0N7 80 aa4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 C10orf99Q6UWK7 81 aa4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 C2orf66Q6UXQ4 117 aa4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 TMEM61Q8N0U2 210 aa4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 PRRC2AP48634 2157 aaKnown RBP4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 UBE2AP49459 152 aa4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 MIAQ16674 131 aa4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 ADAMTSL4-AS1Q5T5F5 129 aa4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 C7orf65Q6ZTY9 151 aa4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 RPL39LQ96EH5 51 aaKnown RBP4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 OPRPNQ99935 248 aaPredicted RBP4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 LINC00846Q9NV44 126 aa4.77□□□□□ -1.65
CDKAL1-204ENST00000613575 MTORP42345 2549 aa4.76□□□□□ -1.65
CDKAL1-204ENST00000613575 IGKV3-7A0A075B6H7 116 aa4.76□□□□□ -1.65
CDKAL1-204ENST00000613575 TRAV12-3A0A0B4J271 114 aa4.76□□□□□ -1.65
CDKAL1-204ENST00000613575 A0A0J9YXY3 114 aa4.76□□□□□ -1.65
CDKAL1-204ENST00000613575 CD28P10747 220 aa4.76□□□□□ -1.65
CDKAL1-204ENST00000613575 DEFB113Q30KQ7 82 aa4.76□□□□□ -1.65
CDKAL1-204ENST00000613575 PIK3CD-AS1Q5SR53 167 aa4.76□□□□□ -1.65
CDKAL1-204ENST00000613575 SNURFQ9Y675 71 aa4.76□□□□□ -1.65
CDKAL1-204ENST00000613575 ATRQ13535 2644 aa4.75□□□□□ -1.65
CDKAL1-204ENST00000613575 CSPG4Q6UVK1 2322 aa4.75□□□□□ -1.65
CDKAL1-204ENST00000613575 IGHV1OR15-1A0A075B7D0 117 aa4.75□□□□□ -1.65
CDKAL1-204ENST00000613575 A8MUN3 132 aa4.75□□□□□ -1.65
CDKAL1-204ENST00000613575 M0QY20 66 aa4.75□□□□□ -1.65
CDKAL1-204ENST00000613575 SUMO4Q6EEV6 95 aa4.75□□□□□ -1.65
CDKAL1-204ENST00000613575 ATP11AUNQ6ZP68 121 aa4.75□□□□□ -1.65
CDKAL1-204ENST00000613575 OBSCN-AS1Q96MR7 158 aa4.75□□□□□ -1.65
CDKAL1-204ENST00000613575 TSHBP01222 138 aa4.74□□□□□ -1.65
CDKAL1-204ENST00000613575 KRTAP10-9P60411 292 aa4.74□□□□□ -1.65
CDKAL1-204ENST00000613575 CXCL6P80162 114 aa4.74□□□□□ -1.65
CDKAL1-204ENST00000613575 LINC00467Q9BRT7 94 aa4.74□□□□□ -1.65
CDKAL1-204ENST00000613575 USP9YO00507 2555 aaPredicted RBP4.74□□□□□ -1.65
CDKAL1-204ENST00000613575 OTOGQ6ZRI0 2925 aa4.73□□□□□ -1.65
CDKAL1-204ENST00000613575 MGPP08493 103 aa4.73□□□□□ -1.65
CDKAL1-204ENST00000613575 A0A087WZ39 114 aa4.73□□□□□ -1.65
CDKAL1-204ENST00000613575 CCL24O00175 119 aa4.73□□□□□ -1.65
CDKAL1-204ENST00000613575 NKAPP1Q8N9T2 125 aa4.73□□□□□ -1.65
CDKAL1-204ENST00000613575 MAPK1IP1LQ8NDC0 245 aa4.73□□□□□ -1.65
CDKAL1-204ENST00000613575 DIRC1Q969H9 104 aa4.73□□□□□ -1.65
CDKAL1-204ENST00000613575 UBL5Q9BZL1 73 aa4.73□□□□□ -1.65
CDKAL1-204ENST00000613575 Q9H8V8 135 aa4.73□□□□□ -1.65
CDKAL1-204ENST00000613575 SPINK13Q1W4C9 94 aa4.72□□□□□ -1.65
CDKAL1-204ENST00000613575 ENHOQ6UWT2 76 aa4.72□□□□□ -1.65
CDKAL1-204ENST00000613575 C4orf3Q8WVX3 66 aa4.72□□□□□ -1.65
CDKAL1-204ENST00000613575 LITAFQ99732 161 aa4.72□□□□□ -1.65
CDKAL1-204ENST00000613575 C14orf132Q9NPU4 83 aa4.72□□□□□ -1.65
CDKAL1-204ENST00000613575 ESM1Q9NQ30 184 aa4.72□□□□□ -1.65
CDKAL1-204ENST00000613575 C22orf24Q9Y442 160 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms