RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 C9orf129Q5T035 196 aaKnown RBP11.65□□□□□ -0.54
CNOT3-208ENST00000613073 C16orf74Q96GX8 76 aa11.65□□□□□ -0.54
CNOT3-208ENST00000613073 ATOX1O00244 68 aa11.65□□□□□ -0.54
CNOT3-208ENST00000613073 K7EQD1 137 aa11.64□□□□□ -0.55
CNOT3-208ENST00000613073 NDUFA1O15239 70 aa11.64□□□□□ -0.55
CNOT3-208ENST00000613073 OXTP01178 125 aa11.64□□□□□ -0.55
CNOT3-208ENST00000613073 CXCL5P42830 114 aa11.64□□□□□ -0.55
CNOT3-208ENST00000613073 C14orf132Q9NPU4 83 aa11.64□□□□□ -0.55
CNOT3-208ENST00000613073 C4orf26Q17RF5 130 aa11.64□□□□□ -0.55
CNOT3-208ENST00000613073 F8P00451 2351 aa11.63□□□□□ -0.55
CNOT3-208ENST00000613073 TIMM17BO60830 172 aa11.62□□□□□ -0.55
CNOT3-208ENST00000613073 DNAL4O96015 105 aa11.62□□□□□ -0.55
CNOT3-208ENST00000613073 RPL36AP83881 106 aaKnown RBP11.62□□□□□ -0.55
CNOT3-208ENST00000613073 DGAT2L7PQ6IED9 249 aa11.62□□□□□ -0.55
CNOT3-208ENST00000613073 RPL36ALQ969Q0 106 aaKnown RBP11.62□□□□□ -0.55
CNOT3-208ENST00000613073 DPH3Q96FX2 82 aa11.62□□□□□ -0.55
CNOT3-208ENST00000613073 LOC100131303A0A0U1RQF7 123 aa11.62□□□□□ -0.55
CNOT3-208ENST00000613073 INAFM2P0DMQ5 153 aa11.62□□□□□ -0.55
CNOT3-208ENST00000613073 RPL18AQ02543 176 aaKnown RBP11.62□□□□□ -0.55
CNOT3-208ENST00000613073 HRCT1Q6UXD1 115 aa11.62□□□□□ -0.55
CNOT3-208ENST00000613073 PRIMA1Q86XR5 153 aa11.62□□□□□ -0.55
CNOT3-208ENST00000613073 MALP21145 153 aa11.61□□□□□ -0.55
CNOT3-208ENST00000613073 HIST1H4AP62805 103 aaKnown RBP11.6□□□□□ -0.55
CNOT3-208ENST00000613073 NTM-AS1Q6ZSK4 140 aa11.6□□□□□ -0.55
CNOT3-208ENST00000613073 DEFB130BP0DP73 79 aa11.59□□□□□ -0.55
CNOT3-208ENST00000613073 DEFB130AP0DP74 79 aa11.59□□□□□ -0.55
CNOT3-208ENST00000613073 LINC00846Q9NV44 126 aa11.59□□□□□ -0.55
CNOT3-208ENST00000613073 TRGV4A0A0C4DH28 118 aa11.58□□□□□ -0.56
CNOT3-208ENST00000613073 TRBV10-1A0A0K0K1A3 114 aa11.58□□□□□ -0.56
CNOT3-208ENST00000613073 RPS28P62857 69 aaKnown RBP11.58□□□□□ -0.56
CNOT3-208ENST00000613073 OVOL2Q9BRP0 275 aa11.58□□□□□ -0.56
CNOT3-208ENST00000613073 C9orf66Q5T8R8 295 aa11.57□□□□□ -0.56
CNOT3-208ENST00000613073 A0A087WYN8 130 aa11.57□□□□□ -0.56
CNOT3-208ENST00000613073 SERP2Q8N6R1 65 aa11.56□□□□□ -0.56
CNOT3-208ENST00000613073 TMEM258P61165 79 aa11.55□□□□□ -0.56
CNOT3-208ENST00000613073 USP17L23D6RBM5 183 aa11.55□□□□□ -0.56
CNOT3-208ENST00000613073 LINC00242Q5T6M2 205 aa11.55□□□□□ -0.56
CNOT3-208ENST00000613073 LINC01561Q8N1V8 128 aa11.55□□□□□ -0.56
CNOT3-208ENST00000613073 NCR3O14931 201 aa11.54□□□□□ -0.56
CNOT3-208ENST00000613073 WFDC9Q8NEX5 89 aa11.54□□□□□ -0.56
CNOT3-208ENST00000613073 FHL2Q14192 279 aa11.54□□□□□ -0.56
CNOT3-208ENST00000613073 FAM222AQ5U5X8 452 aa11.54□□□□□ -0.56
CNOT3-208ENST00000613073 UPK3BQ9BT76 320 aa11.54□□□□□ -0.56
CNOT3-208ENST00000613073 SMIM1B2RUZ4 78 aa11.53□□□□□ -0.56
CNOT3-208ENST00000613073 SLPIP03973 132 aa11.53□□□□□ -0.56
CNOT3-208ENST00000613073 TRBV6-4A0A1B0GX49 114 aa11.53□□□□□ -0.56
CNOT3-208ENST00000613073 F5H768 121 aa11.53□□□□□ -0.56
CNOT3-208ENST00000613073 DEFB4AO15263 64 aa11.52□□□□□ -0.56
CNOT3-208ENST00000613073 CRPP02741 224 aa11.52□□□□□ -0.56
CNOT3-208ENST00000613073 LINC00337Q8N6G1 96 aa11.52□□□□□ -0.56
CNOT3-208ENST00000613073 DEFB135Q30KP9 77 aa11.52□□□□□ -0.57
CNOT3-208ENST00000613073 X6R8D5 127 aa11.52□□□□□ -0.57
CNOT3-208ENST00000613073 IGLV5-39A0A0G2JS06 123 aa11.51□□□□□ -0.57
CNOT3-208ENST00000613073 IGLV5-45A0A087WSX0 123 aa11.51□□□□□ -0.57
CNOT3-208ENST00000613073 UBE2L6O14933 153 aa11.5□□□□□ -0.57
CNOT3-208ENST00000613073 LECT2O14960 151 aa11.5□□□□□ -0.57
CNOT3-208ENST00000613073 Q5XG85 94 aa11.5□□□□□ -0.57
CNOT3-208ENST00000613073 TMEM243Q9BU79 118 aa11.5□□□□□ -0.57
CNOT3-208ENST00000613073 TOMM7Q9P0U1 55 aa11.5□□□□□ -0.57
CNOT3-208ENST00000613073 Q6JHZ5 121 aa11.49□□□□□ -0.57
CNOT3-208ENST00000613073 MIR7-3HGQ8N6C7 128 aa11.49□□□□□ -0.57
CNOT3-208ENST00000613073 SMIM11BQ8TCY0 68 aa11.49□□□□□ -0.57
CNOT3-208ENST00000613073 COPS9Q8WXC6 57 aa11.49□□□□□ -0.57
CNOT3-208ENST00000613073 CDC42SE2Q9NRR3 84 aa11.48□□□□□ -0.57
CNOT3-208ENST00000613073 TRAV23DV6A0A075B6W5 121 aa11.47□□□□□ -0.57
CNOT3-208ENST00000613073 IGKV3OR2-268A0A0C4DH90 116 aa11.47□□□□□ -0.57
CNOT3-208ENST00000613073 RPL28P46779 137 aaKnown RBP11.47□□□□□ -0.57
CNOT3-208ENST00000613073 SND1-IT1Q9HBX3 110 aa11.47□□□□□ -0.57
CNOT3-208ENST00000613073 STAB1Q9NY15 2570 aa11.47□□□□□ -0.57
CNOT3-208ENST00000613073 FBN1P35555 2871 aaKnown RBP11.47□□□□□ -0.57
CNOT3-208ENST00000613073 IGKV2-28A0A075B6P5 120 aa11.47□□□□□ -0.57
CNOT3-208ENST00000613073 IGKV2D-28P01615 120 aa11.47□□□□□ -0.57
CNOT3-208ENST00000613073 PKD1L1Q8TDX9 2849 aa11.46□□□□□ -0.57
CNOT3-208ENST00000613073 TRAV13-2A0A0B4J235 113 aa11.46□□□□□ -0.58
CNOT3-208ENST00000613073 A0A096LPF7 62 aa11.45□□□□□ -0.58
CNOT3-208ENST00000613073 GHRHP01286 108 aa11.45□□□□□ -0.58
CNOT3-208ENST00000613073 GYPEP15421 78 aa11.45□□□□□ -0.58
CNOT3-208ENST00000613073 TRBV6-8A0A0A6YYG3 113 aa11.44□□□□□ -0.58
CNOT3-208ENST00000613073 LINC00158P58513 81 aa11.44□□□□□ -0.58
CNOT3-208ENST00000613073 C20orf197Q8N268 126 aa11.43□□□□□ -0.58
CNOT3-208ENST00000613073 LINC00612Q8N6U2 182 aa11.43□□□□□ -0.58
CNOT3-208ENST00000613073 IGLV4-60A0A075B6I1 120 aa11.43□□□□□ -0.58
CNOT3-208ENST00000613073 APOC4P55056 127 aa11.43□□□□□ -0.58
CNOT3-208ENST00000613073 FAM19A1Q7Z5A9 133 aa11.43□□□□□ -0.58
CNOT3-208ENST00000613073 IGHV4-28A0A0C4DH34 117 aa11.42□□□□□ -0.58
CNOT3-208ENST00000613073 PFN2P35080 140 aa11.41□□□□□ -0.58
CNOT3-208ENST00000613073 MAST4O15021 2626 aa11.41□□□□□ -0.58
CNOT3-208ENST00000613073 IGHV4-30-4P0DP06 118 aa11.4□□□□□ -0.58
CNOT3-208ENST00000613073 OXLD1Q5BKU9 147 aa11.4□□□□□ -0.58
CNOT3-208ENST00000613073 ANK2Q01484 3957 aa11.4□□□□□ -0.58
CNOT3-208ENST00000613073 ENHOQ6UWT2 76 aa11.4□□□□□ -0.58
CNOT3-208ENST00000613073 PAX4O43316 350 aa11.39□□□□□ -0.59
CNOT3-208ENST00000613073 C11orf68Q9H3H3 251 aaKnown RBP11.39□□□□□ -0.59
CNOT3-208ENST00000613073 PRO0255Q9UI72 69 aa11.39□□□□□ -0.59
CNOT3-208ENST00000613073 CELA1Q9UNI1 258 aa11.39□□□□□ -0.59
CNOT3-208ENST00000613073 CCL18P55774 89 aa11.38□□□□□ -0.59
CNOT3-208ENST00000613073 LYRM9A8MSI8 78 aa11.38□□□□□ -0.59
CNOT3-208ENST00000613073 FAM19A3Q7Z5A8 133 aa11.38□□□□□ -0.59
CNOT3-208ENST00000613073 KRTAP24-1Q3LI83 254 aa11.37□□□□□ -0.59
CNOT3-208ENST00000613073 DAD1P61803 113 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms