RNA–Protein interactions for RNA: ENST00000612779.1

HOXA2-202, Transcript of homeobox A2, humanhuman

Gene HOXA2, Length 1,993 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2-202ENST00000612779 SMIM1B2RUZ4 78 aa12.91□□□□□ -0.34
HOXA2-202ENST00000612779 REG3AQ06141 175 aa12.91□□□□□ -0.34
HOXA2-202ENST00000612779 SFTA2Q6UW10 78 aa12.91□□□□□ -0.34
HOXA2-202ENST00000612779 PRO1854Q9UHT4 67 aa12.91□□□□□ -0.34
HOXA2-202ENST00000612779 ERG28Q9UKR5 140 aa12.91□□□□□ -0.34
HOXA2-202ENST00000612779 PRR34Q9NV39 138 aa12.9□□□□□ -0.34
HOXA2-202ENST00000612779 LGALS3P17931 250 aaKnown RBP12.9□□□□□ -0.34
HOXA2-202ENST00000612779 ANKRD29Q8N6D5 301 aa12.9□□□□□ -0.34
HOXA2-202ENST00000612779 SS18Q15532 418 aa12.89□□□□□ -0.35
HOXA2-202ENST00000612779 IGHV3-33P01772 117 aa12.89□□□□□ -0.35
HOXA2-202ENST00000612779 KLK12Q9UKR0 248 aa12.88□□□□□ -0.35
HOXA2-202ENST00000612779 A0A087WZ39 114 aa12.87□□□□□ -0.35
HOXA2-202ENST00000612779 ENHOQ6UWT2 76 aa12.87□□□□□ -0.35
HOXA2-202ENST00000612779 LINC01600Q96MT4 127 aa12.87□□□□□ -0.35
HOXA2-202ENST00000612779 LINC00588Q9Y4M8 146 aa12.87□□□□□ -0.35
HOXA2-202ENST00000612779 A0A0B4J2C4 111 aa12.86□□□□□ -0.35
HOXA2-202ENST00000612779 ZFAND6Q6FIF0 208 aa12.86□□□□□ -0.35
HOXA2-202ENST00000612779 XCL1P47992 114 aa12.85□□□□□ -0.35
HOXA2-202ENST00000612779 LINC01556Q5JQF7 62 aa12.85□□□□□ -0.35
HOXA2-202ENST00000612779 SLC25A20O43772 301 aa12.85□□□□□ -0.35
HOXA2-202ENST00000612779 SCGB1C2P0DMR2 95 aa12.85□□□□□ -0.35
HOXA2-202ENST00000612779 CHCHD10Q8WYQ3 142 aaPredicted RBP12.85□□□□□ -0.35
HOXA2-202ENST00000612779 C5orf38Q86SI9 138 aa12.84□□□□□ -0.35
HOXA2-202ENST00000612779 IGLV10-54A0A075B6I4 117 aa12.83□□□□□ -0.35
HOXA2-202ENST00000612779 CD164L2Q6UWJ8 174 aa12.83□□□□□ -0.35
HOXA2-202ENST00000612779 NDUFA12Q9UI09 145 aa12.83□□□□□ -0.35
HOXA2-202ENST00000612779 A4D1N5 150 aa12.83□□□□□ -0.36
HOXA2-202ENST00000612779 DNAH10OSP0CZ25 163 aa12.83□□□□□ -0.36
HOXA2-202ENST00000612779 CCL18P55774 89 aa12.83□□□□□ -0.36
HOXA2-202ENST00000612779 APLNQ9ULZ1 77 aa12.82□□□□□ -0.36
HOXA2-202ENST00000612779 EIF4EBP3O60516 100 aaPredicted RBP12.81□□□□□ -0.36
HOXA2-202ENST00000612779 ANAPC13Q9BS18 74 aa12.81□□□□□ -0.36
HOXA2-202ENST00000612779 DYNC2H1Q8NCM8 4307 aaKnown RBP12.81□□□□□ -0.36
HOXA2-202ENST00000612779 LINC01561Q8N1V8 128 aa12.81□□□□□ -0.36
HOXA2-202ENST00000612779 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.8□□□□□ -0.36
HOXA2-202ENST00000612779 A0A0J9YXY3 114 aa12.8□□□□□ -0.36
HOXA2-202ENST00000612779 C9JAW5 83 aa12.8□□□□□ -0.36
HOXA2-202ENST00000612779 NDUFA1O15239 70 aa12.8□□□□□ -0.36
HOXA2-202ENST00000612779 UBE2WQ96B02 151 aa12.8□□□□□ -0.36
HOXA2-202ENST00000612779 UPK3BQ9BT76 320 aa12.8□□□□□ -0.36
HOXA2-202ENST00000612779 ZNF625Q96I27 306 aaPredicted RBP12.79□□□□□ -0.36
HOXA2-202ENST00000612779 TRAV8-4A0A0B4J246 113 aa12.78□□□□□ -0.36
HOXA2-202ENST00000612779 CRPP02741 224 aa12.78□□□□□ -0.36
HOXA2-202ENST00000612779 ATXN8Q156A1 80 aa12.78□□□□□ -0.36
HOXA2-202ENST00000612779 MIAQ16674 131 aa12.78□□□□□ -0.36
HOXA2-202ENST00000612779 COX7B2Q8TF08 81 aa12.78□□□□□ -0.36
HOXA2-202ENST00000612779 NUPR2A6NF83 97 aa12.77□□□□□ -0.37
HOXA2-202ENST00000612779 COX7A2LO14548 114 aa12.77□□□□□ -0.37
HOXA2-202ENST00000612779 RPL13AP40429 203 aaKnown RBP12.77□□□□□ -0.37
HOXA2-202ENST00000612779 Q6Q795 121 aa12.77□□□□□ -0.37
HOXA2-202ENST00000612779 LINC01620Q4KN68 170 aa12.76□□□□□ -0.37
HOXA2-202ENST00000612779 KRTAP26-1Q6PEX3 210 aa12.76□□□□□ -0.37
HOXA2-202ENST00000612779 MUSTN1Q8IVN3 82 aa12.76□□□□□ -0.37
HOXA2-202ENST00000612779 LITAFQ99732 161 aa12.76□□□□□ -0.37
HOXA2-202ENST00000612779 Q9H8V8 135 aa12.76□□□□□ -0.37
HOXA2-202ENST00000612779 TRBV30A0A0K0K1B3 111 aa12.75□□□□□ -0.37
HOXA2-202ENST00000612779 CSMD3Q7Z407 3707 aa12.75□□□□□ -0.37
HOXA2-202ENST00000612779 SNCGO76070 127 aa12.74□□□□□ -0.37
HOXA2-202ENST00000612779 NTN5Q8WTR8 489 aaPredicted RBP12.74□□□□□ -0.37
HOXA2-202ENST00000612779 TOMM7Q9P0U1 55 aa12.74□□□□□ -0.37
HOXA2-202ENST00000612779 TRBV10-2A0A0K0K1G8 114 aa12.73□□□□□ -0.37
HOXA2-202ENST00000612779 GAGE2BQ13066 116 aa12.73□□□□□ -0.37
HOXA2-202ENST00000612779 GAGE2EQ4V326 116 aa12.73□□□□□ -0.37
HOXA2-202ENST00000612779 GAGE2DQ9UEU5 116 aa12.73□□□□□ -0.37
HOXA2-202ENST00000612779 KIAA0087Q14695 138 aa12.72□□□□□ -0.37
HOXA2-202ENST00000612779 Q8IZM0 81 aa12.72□□□□□ -0.37
HOXA2-202ENST00000612779 KLK5Q9Y337 293 aaPredicted RBP12.72□□□□□ -0.37
HOXA2-202ENST00000612779 DNAH7Q8WXX0 4024 aa12.72□□□□□ -0.37
HOXA2-202ENST00000612779 IBA57-AS1B1ANH7 110 aa12.71□□□□□ -0.37
HOXA2-202ENST00000612779 TIMM17BO60830 172 aa12.71□□□□□ -0.37
HOXA2-202ENST00000612779 HERV-K104P63124 156 aa12.71□□□□□ -0.37
HOXA2-202ENST00000612779 ADAMTSL4-AS1Q5T5F5 129 aa12.71□□□□□ -0.37
HOXA2-202ENST00000612779 WWC2-AS2Q96NR7 200 aa12.71□□□□□ -0.37
HOXA2-202ENST00000612779 MALP21145 153 aa12.7□□□□□ -0.38
HOXA2-202ENST00000612779 NDUFV3P56181 108 aaKnown RBP12.7□□□□□ -0.38
HOXA2-202ENST00000612779 Q1RN00 199 aa12.7□□□□□ -0.38
HOXA2-202ENST00000612779 H7C2G1 150 aa12.69□□□□□ -0.38
HOXA2-202ENST00000612779 TRIAP1O43715 76 aa12.69□□□□□ -0.38
HOXA2-202ENST00000612779 SPANXDQ9BXN6 97 aa12.69□□□□□ -0.38
HOXA2-202ENST00000612779 SPANXCQ9NY87 97 aa12.69□□□□□ -0.38
HOXA2-202ENST00000612779 C6orf226Q5I0X4 101 aa12.68□□□□□ -0.38
HOXA2-202ENST00000612779 C1orf43Q9BWL3 253 aa12.68□□□□□ -0.38
HOXA2-202ENST00000612779 H3BT86 120 aa12.67□□□□□ -0.38
HOXA2-202ENST00000612779 SS18L2Q9UHA2 77 aa12.67□□□□□ -0.38
HOXA2-202ENST00000612779 PRSS2P07478 247 aa12.67□□□□□ -0.38
HOXA2-202ENST00000612779 IFITM1P13164 125 aa12.66□□□□□ -0.38
HOXA2-202ENST00000612779 TEX49A0A1B0GTD5 131 aa12.65□□□□□ -0.38
HOXA2-202ENST00000612779 C2orf82Q6UX34 121 aa12.65□□□□□ -0.38
HOXA2-202ENST00000612779 UBE2DNLQ8IWF7 75 aa12.65□□□□□ -0.38
HOXA2-202ENST00000612779 IGKV2D-24A0A075B6R9 120 aa12.65□□□□□ -0.38
HOXA2-202ENST00000612779 CIRBPQ14011 172 aaKnown RBP12.65□□□□□ -0.38
HOXA2-202ENST00000612779 TTC32Q5I0X7 151 aa12.65□□□□□ -0.38
HOXA2-202ENST00000612779 Q9HAA7 133 aa12.65□□□□□ -0.38
HOXA2-202ENST00000612779 B5MCH6 92 aa12.64□□□□□ -0.39
HOXA2-202ENST00000612779 FAM240AA0A1B0GVK7 77 aa12.63□□□□□ -0.39
HOXA2-202ENST00000612779 MEIG1Q5JSS6 88 aa12.63□□□□□ -0.39
HOXA2-202ENST00000612779 DAND5Q8N907 189 aa12.63□□□□□ -0.39
HOXA2-202ENST00000612779 KRTAP1-5Q9BYS1 174 aa12.63□□□□□ -0.39
HOXA2-202ENST00000612779 DNAH1Q9P2D7 4330 aa12.63□□□□□ -0.39
HOXA2-202ENST00000612779 CXCL5P42830 114 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms