RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 TRAV13-2A0A0B4J235 113 aa-0.6□□□□□ -2.51
ITGB5-213ENST00000608945 H0YAA0 97 aa-0.6□□□□□ -2.51
ITGB5-213ENST00000608945 APOC3P02656 99 aa-0.6□□□□□ -2.51
ITGB5-213ENST00000608945 KRTAP8-1Q8IUC2 63 aa-0.6□□□□□ -2.51
ITGB5-213ENST00000608945 PYDC1Q8WXC3 89 aa-0.6□□□□□ -2.51
ITGB5-213ENST00000608945 MAFIPQ8WZ33 124 aa-0.6□□□□□ -2.51
ITGB5-213ENST00000608945 TCEAL4Q96EI5 215 aa-0.6□□□□□ -2.51
ITGB5-213ENST00000608945 SDF2Q99470 211 aa-0.6□□□□□ -2.51
ITGB5-213ENST00000608945 PATJQ8NI35 1801 aa-0.6□□□□□ -2.51
ITGB5-213ENST00000608945 TULP4Q9NRJ4 1543 aa-0.6□□□□□ -2.51
ITGB5-213ENST00000608945 ZNF518AQ6AHZ1 1483 aa-0.61□□□□□ -2.51
ITGB5-213ENST00000608945 DOCK2Q92608 1830 aa-0.61□□□□□ -2.51
ITGB5-213ENST00000608945 SPAARA0A1B0GVQ0 90 aa-0.61□□□□□ -2.51
ITGB5-213ENST00000608945 MT1GP13640 62 aa-0.61□□□□□ -2.51
ITGB5-213ENST00000608945 TPPP2P59282 170 aa-0.61□□□□□ -2.51
ITGB5-213ENST00000608945 DEFB135Q30KP9 77 aa-0.61□□□□□ -2.51
ITGB5-213ENST00000608945 MRC1P22897 1456 aa-0.61□□□□□ -2.51
ITGB5-213ENST00000608945 MYH8P13535 1937 aa-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 PRG4Q92954 1404 aaPredicted RBP-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 NSD3Q9BZ95 1437 aa-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 HMGXB3Q12766 1538 aa-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 MAP3K1Q13233 1512 aa-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 UQCR11O14957 56 aa-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 COPZ1P61923 177 aa-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 SMCO1Q147U7 214 aa-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 BAGE2Q86Y30 109 aa-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 TTC9CQ8N5M4 171 aa-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 DEFB123Q8N688 67 aa-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 COPS9Q8WXC6 57 aa-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 TPT1P8Q9HAU6 139 aa-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 BTAF1O14981 1849 aa-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 SCN11AQ9UI33 1791 aa-0.62□□□□□ -2.51
ITGB5-213ENST00000608945 SHROOM2Q13796 1616 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 LRRC37A2A6NM11 1700 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 KIAA1551Q9HCM1 1747 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 F8VRH5 84 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 SMR3BP02814 79 aaPredicted RBP-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 MT1EP04732 61 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 C12orf73Q69YU5 71 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 MT1MQ8N339 61 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 TSTD1Q8NFU3 115 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 MT1LQ93083 61 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 AMELXQ99217 191 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 TMEM191AQ9H0A3 160 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 CCDC167Q9P0B6 97 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 COPZ2Q9P299 210 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 GAPVD1Q14C86 1478 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 ARHGEF5Q12774 1597 aa-0.63□□□□□ -2.51
ITGB5-213ENST00000608945 FHAD1B1AJZ9 1412 aa-0.64□□□□□ -2.51
ITGB5-213ENST00000608945 SLIT1O75093 1534 aa-0.64□□□□□ -2.51
ITGB5-213ENST00000608945 CICQ96RK0 1608 aaPredicted RBP-0.64□□□□□ -2.51
ITGB5-213ENST00000608945 GOLGA4Q13439 2230 aaKnown RBP-0.64□□□□□ -2.51
ITGB5-213ENST00000608945 BCORQ6W2J9 1755 aa-0.64□□□□□ -2.51
ITGB5-213ENST00000608945 KIF21AQ7Z4S6 1674 aa-0.64□□□□□ -2.51
ITGB5-213ENST00000608945 RPS25P62851 125 aaKnown RBP-0.64□□□□□ -2.51
ITGB5-213ENST00000608945 C4AP0C0L4 1744 aa-0.64□□□□□ -2.51
ITGB5-213ENST00000608945 C4BP0C0L5 1744 aa-0.64□□□□□ -2.51
ITGB5-213ENST00000608945 PPIP5K1Q6PFW1 1433 aa-0.64□□□□□ -2.51
ITGB5-213ENST00000608945 RGPD2P0DJD1 1756 aa-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 SCN7AQ01118 1682 aa-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 RIMS1Q86UR5 1692 aaKnown RBP-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 POLA1P09884 1462 aaPredicted RBP-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 MAGI1Q96QZ7 1491 aaPredicted RBP-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 SHANK2Q9UPX8 1470 aa-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 MYH13Q9UKX3 1938 aa-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 H3BNG1 76 aa-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 MT2AP02795 61 aa-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 DEFB1P60022 68 aa-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 Q6AWC8 147 aa-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 C9orf62Q8N4C0 152 aa-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 DEFB105AQ8NG35 78 aa-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 MGST2Q99735 147 aa-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 DYNLRB1Q9NP97 96 aa-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 QRICH2Q9H0J4 1663 aa-0.65□□□□□ -2.51
ITGB5-213ENST00000608945 ANKRD36A6QL64 1941 aa-0.66□□□□□ -2.51
ITGB5-213ENST00000608945 NKTRP30414 1462 aaKnown RBP-0.66□□□□□ -2.51
ITGB5-213ENST00000608945 CDC42BPAQ5VT25 1732 aa-0.66□□□□□ -2.51
ITGB5-213ENST00000608945 NWD2Q9ULI1 1742 aa-0.66□□□□□ -2.51
ITGB5-213ENST00000608945 MT1FP04733 61 aa-0.66□□□□□ -2.52
ITGB5-213ENST00000608945 HIST1H1DP16402 221 aaKnown RBP-0.66□□□□□ -2.52
ITGB5-213ENST00000608945 B2MP61769 119 aa-0.66□□□□□ -2.52
ITGB5-213ENST00000608945 H1FX-AS1Q4G0G2 97 aa-0.66□□□□□ -2.52
ITGB5-213ENST00000608945 AKAP14Q86UN6 197 aa-0.66□□□□□ -2.52
ITGB5-213ENST00000608945 DPH3Q96FX2 82 aa-0.66□□□□□ -2.52
ITGB5-213ENST00000608945 PDCD10Q9BUL8 212 aa-0.66□□□□□ -2.52
ITGB5-213ENST00000608945 ASXL1Q8IXJ9 1541 aa-0.66□□□□□ -2.52
ITGB5-213ENST00000608945 NCOA3Q9Y6Q9 1424 aa-0.66□□□□□ -2.52
ITGB5-213ENST00000608945 MYH6P13533 1939 aa-0.66□□□□□ -2.52
ITGB5-213ENST00000608945 PSME4Q14997 1843 aa-0.66□□□□□ -2.52
ITGB5-213ENST00000608945 CEP152O94986 1710 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 NUP188Q5SRE5 1749 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 KNDC1Q76NI1 1749 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 ANKRD30AQ9BXX3 1397 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 ARHGEF12Q9NZN5 1544 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 MYH7P12883 1935 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 LINC00959A0A1B0GUT2 108 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 LOC285095A0A1B0GVY8 99 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 IGLC7A0M8Q6 106 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 SYS1-DBNDD2H3BUS1 97 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 K7EP34 96 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms