RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 IGHV3OR16-9A0A0B4J2B5 98 aa9.01□□□□□ -0.97
CTSA-216ENST00000607212 SMIM27A0A1W2PRY6 76 aa9.01□□□□□ -0.97
CTSA-216ENST00000607212 RPL32P62910 135 aaKnown RBP9.01□□□□□ -0.97
CTSA-216ENST00000607212 MRPS36P82909 103 aaKnown RBP9.01□□□□□ -0.97
CTSA-216ENST00000607212 PRR4Q16378 134 aa9.01□□□□□ -0.97
CTSA-216ENST00000607212 PACRGQ96M98 296 aaPredicted RBP9.01□□□□□ -0.97
CTSA-216ENST00000607212 LINC00587B1AMM8 73 aa9□□□□□ -0.97
CTSA-216ENST00000607212 NPYP01303 97 aa9□□□□□ -0.97
CTSA-216ENST00000607212 TLX1NBP0CAT3 122 aa9□□□□□ -0.97
CTSA-216ENST00000607212 IGLV1-50A0A075B6I6 118 aa8.99□□□□□ -0.97
CTSA-216ENST00000607212 CTAG1AP78358 180 aa8.99□□□□□ -0.97
CTSA-216ENST00000607212 KRTAP11-1Q8IUC1 163 aa8.99□□□□□ -0.97
CTSA-216ENST00000607212 MRPL18Q9H0U6 180 aaKnown RBP8.98□□□□□ -0.97
CTSA-216ENST00000607212 TRBV30A0A0K0K1B3 111 aa8.97□□□□□ -0.97
CTSA-216ENST00000607212 PPBPP02775 128 aa8.97□□□□□ -0.97
CTSA-216ENST00000607212 PRSS2P07478 247 aa8.97□□□□□ -0.97
CTSA-216ENST00000607212 JOSD1Q15040 202 aaPredicted RBP8.97□□□□□ -0.97
CTSA-216ENST00000607212 C2orf82Q6UX34 121 aa8.97□□□□□ -0.97
CTSA-216ENST00000607212 TMEM136Q6ZRR5 245 aa8.97□□□□□ -0.97
CTSA-216ENST00000607212 FAM104AQ969W3 186 aa8.97□□□□□ -0.97
CTSA-216ENST00000607212 GNB1LQ9BYB4 327 aa8.97□□□□□ -0.97
CTSA-216ENST00000607212 TOMM7Q9P0U1 55 aa8.97□□□□□ -0.97
CTSA-216ENST00000607212 NUPR1O60356 82 aa8.96□□□□□ -0.98
CTSA-216ENST00000607212 RPL13AP40429 203 aaKnown RBP8.96□□□□□ -0.98
CTSA-216ENST00000607212 COX19Q49B96 90 aa8.96□□□□□ -0.98
CTSA-216ENST00000607212 TEX43Q6ZNM6 134 aa8.96□□□□□ -0.98
CTSA-216ENST00000607212 ORMDL3Q8N138 153 aa8.96□□□□□ -0.98
CTSA-216ENST00000607212 TMEM141Q96I45 108 aa8.96□□□□□ -0.98
CTSA-216ENST00000607212 PRELID3AQ96N28 172 aa8.96□□□□□ -0.98
CTSA-216ENST00000607212 C2orf88Q9BSF0 95 aa8.96□□□□□ -0.98
CTSA-216ENST00000607212 LOC389332A0A1B0GUA5 103 aa8.95□□□□□ -0.98
CTSA-216ENST00000607212 NDUFC2-KCTD14E9PQ53 114 aa8.95□□□□□ -0.98
CTSA-216ENST00000607212 LINC00310P59036 64 aa8.95□□□□□ -0.98
CTSA-216ENST00000607212 Q6ZN92 141 aa8.95□□□□□ -0.98
CTSA-216ENST00000607212 LPAP08519 4548 aa8.95□□□□□ -0.98
CTSA-216ENST00000607212 IGLV4-3A0A075B6K6 122 aa8.94□□□□□ -0.98
CTSA-216ENST00000607212 CKS1BP61024 79 aa8.94□□□□□ -0.98
CTSA-216ENST00000607212 KIAA0087Q14695 138 aa8.94□□□□□ -0.98
CTSA-216ENST00000607212 LINC00242Q5T6M2 205 aa8.94□□□□□ -0.98
CTSA-216ENST00000607212 LINC00469Q8N7U9 141 aa8.94□□□□□ -0.98
CTSA-216ENST00000607212 C9orf129Q5T035 196 aaKnown RBP8.93□□□□□ -0.98
CTSA-216ENST00000607212 A0A1B0GXF2 115 aa8.92□□□□□ -0.98
CTSA-216ENST00000607212 KRTAP1-4P0C5Y4 121 aa8.92□□□□□ -0.98
CTSA-216ENST00000607212 KRTAP7-1Q8IUC3 87 aa8.92□□□□□ -0.98
CTSA-216ENST00000607212 MAP1LC3AQ9H492 121 aa8.92□□□□□ -0.98
CTSA-216ENST00000607212 PYGO1Q9Y3Y4 419 aa8.92□□□□□ -0.98
CTSA-216ENST00000607212 TSPAN13O95857 204 aa8.91□□□□□ -0.98
CTSA-216ENST00000607212 C6orf226Q5I0X4 101 aa8.91□□□□□ -0.98
CTSA-216ENST00000607212 ZC2HC1BQ5TFG8 222 aa8.91□□□□□ -0.98
CTSA-216ENST00000607212 VCX2Q9H322 139 aa8.91□□□□□ -0.98
CTSA-216ENST00000607212 CYSLTR1Q9Y271 337 aa8.91□□□□□ -0.98
CTSA-216ENST00000607212 SERF1AO75920 110 aa8.9□□□□□ -0.98
CTSA-216ENST00000607212 LBHQ53QV2 105 aaPredicted RBP8.9□□□□□ -0.98
CTSA-216ENST00000607212 ZNF861PO60384 105 aa8.89□□□□□ -0.99
CTSA-216ENST00000607212 KIAA1644Q3SXP7 199 aa8.89□□□□□ -0.99
CTSA-216ENST00000607212 C2orf66Q6UXQ4 117 aa8.89□□□□□ -0.99
CTSA-216ENST00000607212 ATP5L2Q7Z4Y8 100 aa8.89□□□□□ -0.99
CTSA-216ENST00000607212 BAGE3Q86Y29 109 aa8.89□□□□□ -0.99
CTSA-216ENST00000607212 ALKBH7Q9BT30 221 aaPredicted RBP8.89□□□□□ -0.99
CTSA-216ENST00000607212 XAGE1AQ9HD64 81 aa8.89□□□□□ -0.99
CTSA-216ENST00000607212 A0A0U1RQV1 116 aa8.88□□□□□ -0.99
CTSA-216ENST00000607212 LINC01561Q8N1V8 128 aa8.88□□□□□ -0.99
CTSA-216ENST00000607212 PRO1933Q9H354 126 aa8.88□□□□□ -0.99
CTSA-216ENST00000607212 C22orf24Q9Y442 160 aa8.88□□□□□ -0.99
CTSA-216ENST00000607212 Q8N8P6 123 aa8.87□□□□□ -0.99
CTSA-216ENST00000607212 LAMTOR2Q9Y2Q5 125 aa8.87□□□□□ -0.99
CTSA-216ENST00000607212 ORMDL2Q53FV1 153 aa8.86□□□□□ -0.99
CTSA-216ENST00000607212 Q8IZM0 81 aa8.86□□□□□ -0.99
CTSA-216ENST00000607212 GEMIN7Q9H840 131 aaKnown RBP8.86□□□□□ -0.99
CTSA-216ENST00000607212 RPL28P46779 137 aaKnown RBP8.85□□□□□ -0.99
CTSA-216ENST00000607212 TSTD3H0UI37 97 aa8.84□□□□□ -0.99
CTSA-216ENST00000607212 SCGB1D1O95968 90 aa8.84□□□□□ -0.99
CTSA-216ENST00000607212 DDTP30046 118 aa8.84□□□□□ -0.99
CTSA-216ENST00000607212 HERVK_113P63121 156 aa8.84□□□□□ -0.99
CTSA-216ENST00000607212 SEC11AP67812 179 aa8.84□□□□□ -0.99
CTSA-216ENST00000607212 PAPPA-AS1Q5QFB9 102 aa8.84□□□□□ -0.99
CTSA-216ENST00000607212 MRPL55Q7Z7F7 128 aaKnown RBP8.84□□□□□ -0.99
CTSA-216ENST00000607212 TYMSOSQ8TAI1 123 aa8.84□□□□□ -0.99
CTSA-216ENST00000607212 C18orf32Q8TCD1 76 aa8.84□□□□□ -0.99
CTSA-216ENST00000607212 AMELXQ99217 191 aa8.84□□□□□ -0.99
CTSA-216ENST00000607212 LINC00173Q6ZV60 143 aa8.83□□□□□ -1
CTSA-216ENST00000607212 PRSS47A8MTI9 375 aa8.82□□□□□ -1
CTSA-216ENST00000607212 F8VRH5 84 aa8.82□□□□□ -1
CTSA-216ENST00000607212 C14orf144Q96I85 54 aa8.82□□□□□ -1
CTSA-216ENST00000607212 CDKN2A-AS1Q9UH64 79 aa8.82□□□□□ -1
CTSA-216ENST00000607212 GAGE10A6NGK3 116 aa8.81□□□□□ -1
CTSA-216ENST00000607212 RPL37AP8A6NKH3 93 aa8.81□□□□□ -1
CTSA-216ENST00000607212 BCE1O60756 84 aa8.81□□□□□ -1
CTSA-216ENST00000607212 CRYGAP11844 174 aa8.81□□□□□ -1
CTSA-216ENST00000607212 G0S2P27469 103 aa8.8□□□□□ -1
CTSA-216ENST00000607212 CXCL5P42830 114 aa8.8□□□□□ -1
CTSA-216ENST00000607212 UBE2AP49459 152 aa8.8□□□□□ -1
CTSA-216ENST00000607212 URB1-AS1Q96HZ7 61 aa8.8□□□□□ -1
CTSA-216ENST00000607212 IGIPA6NJ69 53 aa8.79□□□□□ -1
CTSA-216ENST00000607212 K7EMI3 77 aa8.79□□□□□ -1
CTSA-216ENST00000607212 NPSP0C0P6 89 aa8.79□□□□□ -1
CTSA-216ENST00000607212 NXT2Q9NPJ8 142 aaKnown RBP8.79□□□□□ -1
CTSA-216ENST00000607212 TP73-AS1Q9UF72 201 aa8.79□□□□□ -1
CTSA-216ENST00000607212 A0A087X002 238 aa8.78□□□□□ -1
CTSA-216ENST00000607212 FAM19A3Q7Z5A8 133 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms