RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 SLC25A20O43772 301 aa13.64□□□□□ -0.23
MMP28-201ENST00000605424 HTN3P15516 51 aa13.64□□□□□ -0.23
MMP28-201ENST00000605424 FOXI1Q12951 378 aa13.64□□□□□ -0.23
MMP28-201ENST00000605424 LINC01620Q4KN68 170 aa13.64□□□□□ -0.23
MMP28-201ENST00000605424 C9JAW5 83 aa13.64□□□□□ -0.23
MMP28-201ENST00000605424 H3BNG1 76 aa13.64□□□□□ -0.23
MMP28-201ENST00000605424 ANGP03950 147 aaKnown RBP13.64□□□□□ -0.23
MMP28-201ENST00000605424 REG3AQ06141 175 aa13.64□□□□□ -0.23
MMP28-201ENST00000605424 MIR7-3HGQ8N6C7 128 aa13.64□□□□□ -0.23
MMP28-201ENST00000605424 LINC00158P58513 81 aa13.62□□□□□ -0.23
MMP28-201ENST00000605424 CLPSL2Q6UWE3 100 aa13.62□□□□□ -0.23
MMP28-201ENST00000605424 PPDPFLQ8WWR9 84 aa13.62□□□□□ -0.23
MMP28-201ENST00000605424 TRAV13-2A0A0B4J235 113 aa13.61□□□□□ -0.23
MMP28-201ENST00000605424 COX7A2LO14548 114 aa13.61□□□□□ -0.23
MMP28-201ENST00000605424 CHCHD10Q8WYQ3 142 aaPredicted RBP13.61□□□□□ -0.23
MMP28-201ENST00000605424 C11orf68Q9H3H3 251 aaKnown RBP13.61□□□□□ -0.23
MMP28-201ENST00000605424 TRBV10-2A0A0K0K1G8 114 aa13.6□□□□□ -0.23
MMP28-201ENST00000605424 LST1O00453 97 aa13.6□□□□□ -0.23
MMP28-201ENST00000605424 CXCL5P42830 114 aa13.6□□□□□ -0.23
MMP28-201ENST00000605424 ANKRD29Q8N6D5 301 aa13.6□□□□□ -0.23
MMP28-201ENST00000605424 SND1-IT1Q9HBX3 110 aa13.58□□□□□ -0.23
MMP28-201ENST00000605424 LYPD5Q6UWN5 251 aa13.56□□□□□ -0.24
MMP28-201ENST00000605424 PRR34Q9NV39 138 aa13.56□□□□□ -0.24
MMP28-201ENST00000605424 CRPP02741 224 aa13.56□□□□□ -0.24
MMP28-201ENST00000605424 CKS1BP61024 79 aa13.56□□□□□ -0.24
MMP28-201ENST00000605424 H3BT86 120 aa13.55□□□□□ -0.24
MMP28-201ENST00000605424 MALP21145 153 aa13.55□□□□□ -0.24
MMP28-201ENST00000605424 CCL18P55774 89 aa13.55□□□□□ -0.24
MMP28-201ENST00000605424 KIAA0087Q14695 138 aa13.55□□□□□ -0.24
MMP28-201ENST00000605424 RETNQ9HD89 108 aa13.55□□□□□ -0.24
MMP28-201ENST00000605424 PFN2P35080 140 aa13.54□□□□□ -0.24
MMP28-201ENST00000605424 COX17Q14061 63 aa13.54□□□□□ -0.24
MMP28-201ENST00000605424 CFAP161Q6P656 301 aa13.54□□□□□ -0.24
MMP28-201ENST00000605424 Q8N3U1 123 aa13.54□□□□□ -0.24
MMP28-201ENST00000605424 CLEC2BQ92478 149 aa13.54□□□□□ -0.24
MMP28-201ENST00000605424 CARD19Q96LW7 228 aa13.54□□□□□ -0.24
MMP28-201ENST00000605424 SPATA25Q9BR10 227 aa13.54□□□□□ -0.24
MMP28-201ENST00000605424 GAGE12HA6NDE8 117 aa13.53□□□□□ -0.24
MMP28-201ENST00000605424 RPL28P46779 137 aaKnown RBP13.52□□□□□ -0.24
MMP28-201ENST00000605424 PCP4P48539 62 aa13.52□□□□□ -0.24
MMP28-201ENST00000605424 KRTAP21-3Q3LHN1 58 aa13.52□□□□□ -0.24
MMP28-201ENST00000605424 IGLV10-54A0A075B6I4 117 aa13.52□□□□□ -0.25
MMP28-201ENST00000605424 IGKV2-28A0A075B6P5 120 aa13.52□□□□□ -0.25
MMP28-201ENST00000605424 IGKV2D-28P01615 120 aa13.52□□□□□ -0.25
MMP28-201ENST00000605424 KPRPQ5T749 579 aaPredicted RBP13.52□□□□□ -0.25
MMP28-201ENST00000605424 KLK5Q9Y337 293 aaPredicted RBP13.52□□□□□ -0.25
MMP28-201ENST00000605424 C2orf82Q6UX34 121 aa13.51□□□□□ -0.25
MMP28-201ENST00000605424 LINC00337Q8N6G1 96 aa13.51□□□□□ -0.25
MMP28-201ENST00000605424 MGAM2Q2M2H8 2515 aa13.5□□□□□ -0.25
MMP28-201ENST00000605424 Q6ZTC4 211 aa13.5□□□□□ -0.25
MMP28-201ENST00000605424 KLK12Q9UKR0 248 aa13.5□□□□□ -0.25
MMP28-201ENST00000605424 TRAV8-4A0A0B4J246 113 aa13.49□□□□□ -0.25
MMP28-201ENST00000605424 DNAH3Q8TD57 4116 aa13.49□□□□□ -0.25
MMP28-201ENST00000605424 MUC7Q8TAX7 377 aa13.49□□□□□ -0.25
MMP28-201ENST00000605424 TRACP01848 142 aa13.48□□□□□ -0.25
MMP28-201ENST00000605424 ENHOQ6UWT2 76 aa13.47□□□□□ -0.25
MMP28-201ENST00000605424 NTN5Q8WTR8 489 aaPredicted RBP13.47□□□□□ -0.25
MMP28-201ENST00000605424 SIGMAR1Q99720 223 aa13.47□□□□□ -0.25
MMP28-201ENST00000605424 NBEAL1Q6ZS30 2694 aa13.47□□□□□ -0.25
MMP28-201ENST00000605424 NOTCH1P46531 2555 aa13.47□□□□□ -0.25
MMP28-201ENST00000605424 A0A0J9YWU9 116 aa13.46□□□□□ -0.25
MMP28-201ENST00000605424 NDUFC2O95298 119 aa13.45□□□□□ -0.26
MMP28-201ENST00000605424 C11orf45Q8TAV5 145 aa13.45□□□□□ -0.26
MMP28-201ENST00000605424 UBE2WQ96B02 151 aa13.45□□□□□ -0.26
MMP28-201ENST00000605424 SPAG11BQ08648 103 aa13.43□□□□□ -0.26
MMP28-201ENST00000605424 H0YGX0 51 aa13.43□□□□□ -0.26
MMP28-201ENST00000605424 SMIM11BQ8TCY0 68 aa13.43□□□□□ -0.26
MMP28-201ENST00000605424 DEFB131BA0A096LNP1 70 aa13.42□□□□□ -0.26
MMP28-201ENST00000605424 WFDC10BQ8IUB3 73 aa13.41□□□□□ -0.26
MMP28-201ENST00000605424 NANOS2P60321 138 aaKnown RBP13.4□□□□□ -0.26
MMP28-201ENST00000605424 CDIP1Q9H305 208 aa13.4□□□□□ -0.26
MMP28-201ENST00000605424 TEX49A0A1B0GTD5 131 aa13.39□□□□□ -0.27
MMP28-201ENST00000605424 GVQW2A0A096LPI5 108 aaPredicted RBP13.39□□□□□ -0.27
MMP28-201ENST00000605424 ESRGQ1W209 222 aa13.39□□□□□ -0.27
MMP28-201ENST00000605424 DEFB121Q5J5C9 76 aa13.39□□□□□ -0.27
MMP28-201ENST00000605424 OR13C6PQ8NH95 151 aa13.39□□□□□ -0.27
MMP28-201ENST00000605424 SCGB1A1P11684 91 aa13.37□□□□□ -0.27
MMP28-201ENST00000605424 FAM218AQ96MZ4 157 aa13.37□□□□□ -0.27
MMP28-201ENST00000605424 UNQ6190/PRO20217Q6UXQ8 127 aa13.36□□□□□ -0.27
MMP28-201ENST00000605424 LINC01556Q5JQF7 62 aa13.35□□□□□ -0.27
MMP28-201ENST00000605424 TM2D3Q9BRN9 247 aa13.35□□□□□ -0.27
MMP28-201ENST00000605424 C9orf116Q5BN46 136 aaPredicted RBP13.35□□□□□ -0.27
MMP28-201ENST00000605424 BAALC-AS2P0C853 105 aa13.34□□□□□ -0.27
MMP28-201ENST00000605424 C6orf223Q8N319 242 aa13.34□□□□□ -0.27
MMP28-201ENST00000605424 TMEM126AQ9H061 195 aa13.34□□□□□ -0.27
MMP28-201ENST00000605424 C10orf25Q5T742 122 aa13.33□□□□□ -0.28
MMP28-201ENST00000605424 KRTAP26-1Q6PEX3 210 aa13.33□□□□□ -0.28
MMP28-201ENST00000605424 TRAV10A0A0B4J240 114 aa13.33□□□□□ -0.28
MMP28-201ENST00000605424 C15orf53Q8NAA6 179 aa13.33□□□□□ -0.28
MMP28-201ENST00000605424 DNAL4O96015 105 aa13.31□□□□□ -0.28
MMP28-201ENST00000605424 FAM240AA0A1B0GVK7 77 aa13.3□□□□□ -0.28
MMP28-201ENST00000605424 A0A1B0GX51 115 aa13.29□□□□□ -0.28
MMP28-201ENST00000605424 K7EIL1 84 aa13.29□□□□□ -0.28
MMP28-201ENST00000605424 ZNF561-AS1K7EIQ3 104 aa13.29□□□□□ -0.28
MMP28-201ENST00000605424 C21orf62-AS1Q17RA5 79 aa13.29□□□□□ -0.28
MMP28-201ENST00000605424 A0A087WYN8 130 aa13.28□□□□□ -0.28
MMP28-201ENST00000605424 LINC00526Q96FQ7 95 aa13.28□□□□□ -0.28
MMP28-201ENST00000605424 C1orf43Q9BWL3 253 aa13.28□□□□□ -0.28
MMP28-201ENST00000605424 F8WDY8 70 aa13.27□□□□□ -0.28
MMP28-201ENST00000605424 DNAH10OSP0CZ25 163 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms