RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	PRSS2	P07478	247 aa		7.64	□□□□□ -1.19
STRN4-223	ENST00000602223	GEMIN7	Q9H840	131 aa	Known RBP	7.64	□□□□□ -1.19
STRN4-223	ENST00000602223	TOMM7	Q9P0U1	55 aa		7.64	□□□□□ -1.19
STRN4-223	ENST00000602223	FA2H	Q7L5A8	372 aa		7.63	□□□□□ -1.19
STRN4-223	ENST00000602223	TINCR	A0A1B0GVN0	87 aa		7.62	□□□□□ -1.19
STRN4-223	ENST00000602223	CKS1B	P61024	79 aa		7.62	□□□□□ -1.19
STRN4-223	ENST00000602223	C6orf226	Q5I0X4	101 aa		7.62	□□□□□ -1.19
STRN4-223	ENST00000602223	REG3G	Q6UW15	175 aa		7.62	□□□□□ -1.19
STRN4-223	ENST00000602223	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	7.62	□□□□□ -1.19
STRN4-223	ENST00000602223	KRTAP7-1	Q8IUC3	87 aa		7.62	□□□□□ -1.19
STRN4-223	ENST00000602223	SMCO4	Q9NRQ5	59 aa		7.62	□□□□□ -1.19
STRN4-223	ENST00000602223	PLA2G2D	Q9UNK4	145 aa		7.62	□□□□□ -1.19
STRN4-223	ENST00000602223	IGLV5-45	A0A087WSX0	123 aa		7.61	□□□□□ -1.19
STRN4-223	ENST00000602223	APOC3	P02656	99 aa		7.61	□□□□□ -1.19
STRN4-223	ENST00000602223	C1orf137	Q5JT78	98 aa		7.61	□□□□□ -1.19
STRN4-223	ENST00000602223	C9orf129	Q5T035	196 aa	Known RBP	7.61	□□□□□ -1.19
STRN4-223	ENST00000602223	KRTAP11-1	Q8IUC1	163 aa		7.61	□□□□□ -1.19
STRN4-223	ENST00000602223	LINC00469	Q8N7U9	141 aa		7.61	□□□□□ -1.19
STRN4-223	ENST00000602223	SMIM1	B2RUZ4	78 aa		7.6	□□□□□ -1.19
STRN4-223	ENST00000602223	CXCL5	P42830	114 aa		7.6	□□□□□ -1.19
STRN4-223	ENST00000602223	PMVK	Q15126	192 aa		7.6	□□□□□ -1.19
STRN4-223	ENST00000602223	CST9L	Q9H4G1	147 aa		7.6	□□□□□ -1.19
STRN4-223	ENST00000602223	TRAPPC1	Q9Y5R8	145 aa		7.6	□□□□□ -1.19
STRN4-223	ENST00000602223		A0A096LNJ9	63 aa		7.59	□□□□□ -1.19
STRN4-223	ENST00000602223		F8VRH5	84 aa		7.59	□□□□□ -1.19
STRN4-223	ENST00000602223		M0QXV9	152 aa		7.59	□□□□□ -1.19
STRN4-223	ENST00000602223	SNAPIN	O95295	136 aa		7.59	□□□□□ -1.19
STRN4-223	ENST00000602223	NDUFA5	Q16718	116 aa		7.59	□□□□□ -1.19
STRN4-223	ENST00000602223	PDZD11	Q5EBL8	140 aa		7.59	□□□□□ -1.19
STRN4-223	ENST00000602223	SVBP	Q8N300	66 aa		7.59	□□□□□ -1.19
STRN4-223	ENST00000602223	C18orf32	Q8TCD1	76 aa		7.59	□□□□□ -1.19
STRN4-223	ENST00000602223	URB1-AS1	Q96HZ7	61 aa		7.59	□□□□□ -1.19
STRN4-223	ENST00000602223	IGLV7-43	P04211	117 aa		7.58	□□□□□ -1.2
STRN4-223	ENST00000602223	KRTAP10-8	P60410	259 aa		7.58	□□□□□ -1.2
STRN4-223	ENST00000602223	LINC00614	P0C842	121 aa		7.57	□□□□□ -1.2
STRN4-223	ENST00000602223	COX7B2	Q8TF08	81 aa		7.57	□□□□□ -1.2
STRN4-223	ENST00000602223	UBE2B	P63146	152 aa		7.56	□□□□□ -1.2
STRN4-223	ENST00000602223	HBD	P02042	147 aa		7.55	□□□□□ -1.2
STRN4-223	ENST00000602223	SPINK8	P0C7L1	97 aa		7.55	□□□□□ -1.2
STRN4-223	ENST00000602223	IGLC3	P0DOY3	106 aa		7.55	□□□□□ -1.2
STRN4-223	ENST00000602223	YPEL4	Q96NS1	127 aa		7.55	□□□□□ -1.2
STRN4-223	ENST00000602223	XAGE1A	Q9HD64	81 aa		7.55	□□□□□ -1.2
STRN4-223	ENST00000602223		H3BRM9	83 aa		7.54	□□□□□ -1.2
STRN4-223	ENST00000602223	RAB5B	P61020	215 aa		7.54	□□□□□ -1.2
STRN4-223	ENST00000602223	ODF1	Q14990	250 aa		7.54	□□□□□ -1.2
STRN4-223	ENST00000602223	DIRC1	Q969H9	104 aa		7.54	□□□□□ -1.2
STRN4-223	ENST00000602223	UBR4	Q5T4S7	5183 aa		7.53	□□□□□ -1.2
STRN4-223	ENST00000602223	PMCHL1	Q16048	86 aa		7.53	□□□□□ -1.2
STRN4-223	ENST00000602223	C22orf24	Q9Y442	160 aa		7.53	□□□□□ -1.2
STRN4-223	ENST00000602223	IGLV5-39	A0A0G2JS06	123 aa		7.52	□□□□□ -1.21
STRN4-223	ENST00000602223		H0Y9J4	135 aa		7.52	□□□□□ -1.21
STRN4-223	ENST00000602223	ZNF22	P17026	224 aa	Predicted RBP	7.52	□□□□□ -1.21
STRN4-223	ENST00000602223	NDUFA6	P56556	154 aa		7.52	□□□□□ -1.21
STRN4-223	ENST00000602223	TP73-AS1	Q9UF72	201 aa		7.52	□□□□□ -1.21
STRN4-223	ENST00000602223	LRP2	P98164	4655 aa		7.51	□□□□□ -1.21
STRN4-223	ENST00000602223	ATP5L	O75964	103 aa		7.51	□□□□□ -1.21
STRN4-223	ENST00000602223	LBH	Q53QV2	105 aa	Predicted RBP	7.51	□□□□□ -1.21
STRN4-223	ENST00000602223	NUPR1	O60356	82 aa		7.5	□□□□□ -1.21
STRN4-223	ENST00000602223	C11orf86	A6NJI1	115 aa		7.49	□□□□□ -1.21
STRN4-223	ENST00000602223	MRPL55	Q7Z7F7	128 aa	Known RBP	7.49	□□□□□ -1.21
STRN4-223	ENST00000602223	BAGE3	Q86Y29	109 aa		7.49	□□□□□ -1.21
STRN4-223	ENST00000602223	CHCHD1	Q96BP2	118 aa	Known RBP	7.49	□□□□□ -1.21
STRN4-223	ENST00000602223	KRTAP1-4	P0C5Y4	121 aa		7.48	□□□□□ -1.21
STRN4-223	ENST00000602223	IGLV5-37	A0A075B6J1	123 aa		7.47	□□□□□ -1.21
STRN4-223	ENST00000602223	ZNF861P	O60384	105 aa		7.47	□□□□□ -1.21
STRN4-223	ENST00000602223	CBLN2	Q8IUK8	224 aa		7.47	□□□□□ -1.21
STRN4-223	ENST00000602223	PRR26	Q8N8Z3	221 aa		7.47	□□□□□ -1.21
STRN4-223	ENST00000602223	TMEM170B	Q5T4T1	132 aa		7.46	□□□□□ -1.22
STRN4-223	ENST00000602223	LINC00167	Q96N53	147 aa		7.46	□□□□□ -1.22
STRN4-223	ENST00000602223	CHTOP	Q9Y3Y2	248 aa	Known RBP	7.46	□□□□□ -1.22
STRN4-223	ENST00000602223	IGLV1-50	A0A075B6I6	118 aa		7.45	□□□□□ -1.22
STRN4-223	ENST00000602223	TRAV12-1	A0A0B4J245	112 aa		7.45	□□□□□ -1.22
STRN4-223	ENST00000602223	PFN2	P35080	140 aa		7.45	□□□□□ -1.22
STRN4-223	ENST00000602223	IFI27L1	Q96BM0	104 aa		7.45	□□□□□ -1.22
STRN4-223	ENST00000602223	ERG28	Q9UKR5	140 aa		7.45	□□□□□ -1.22
STRN4-223	ENST00000602223	RPL37AP8	A6NKH3	93 aa		7.44	□□□□□ -1.22
STRN4-223	ENST00000602223	BCE1	O60756	84 aa		7.44	□□□□□ -1.22
STRN4-223	ENST00000602223	COX17	Q14061	63 aa		7.44	□□□□□ -1.22
STRN4-223	ENST00000602223	SFTA2	Q6UW10	78 aa		7.44	□□□□□ -1.22
STRN4-223	ENST00000602223	GAGE10	A6NGK3	116 aa		7.43	□□□□□ -1.22
STRN4-223	ENST00000602223	HSBP1	O75506	76 aa		7.43	□□□□□ -1.22
STRN4-223	ENST00000602223	NKAPP1	Q8N9T2	125 aa		7.43	□□□□□ -1.22
STRN4-223	ENST00000602223	ZNF625	Q96I27	306 aa	Predicted RBP	7.43	□□□□□ -1.22
STRN4-223	ENST00000602223	SND1-IT1	Q9HBX3	110 aa		7.43	□□□□□ -1.22
STRN4-223	ENST00000602223	TMEM223	A0PJW6	202 aa		7.42	□□□□□ -1.22
STRN4-223	ENST00000602223	TRGC2	P03986	189 aa		7.42	□□□□□ -1.22
STRN4-223	ENST00000602223	RPL28	P46779	137 aa	Known RBP	7.42	□□□□□ -1.22
STRN4-223	ENST00000602223	FAM19A2	Q8N3H0	131 aa		7.42	□□□□□ -1.22
STRN4-223	ENST00000602223	VPREB1	P12018	145 aa		7.41	□□□□□ -1.22
STRN4-223	ENST00000602223	SLC7A5P1	Q8MH63	180 aa		7.41	□□□□□ -1.22
STRN4-223	ENST00000602223	SCO1	O75880	301 aa		7.4	□□□□□ -1.22
STRN4-223	ENST00000602223	RPL13A	P40429	203 aa	Known RBP	7.4	□□□□□ -1.22
STRN4-223	ENST00000602223	LINC00310	P59036	64 aa		7.4	□□□□□ -1.22
STRN4-223	ENST00000602223	LPA	P08519	4548 aa		7.39	□□□□□ -1.23
STRN4-223	ENST00000602223	RPL24	P83731	157 aa	Known RBP	7.39	□□□□□ -1.23
STRN4-223	ENST00000602223	KRTAP13-1	Q8IUC0	172 aa		7.39	□□□□□ -1.23
STRN4-223	ENST00000602223	IGKV2-28	A0A075B6P5	120 aa		7.38	□□□□□ -1.23
STRN4-223	ENST00000602223	SERF1A	O75920	110 aa		7.38	□□□□□ -1.23
STRN4-223	ENST00000602223	IGKV2D-28	P01615	120 aa		7.38	□□□□□ -1.23
STRN4-223	ENST00000602223		Q8NDZ9	215 aa		7.38	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 70 ms