RNA–Protein interactions for RNA: ENST00000596624.1

PNKP-208, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-208ENST00000596624 IGLV5-37A0A075B6J1 123 aa6.22□□□□□ -1.41
PNKP-208ENST00000596624 BCE1O60756 84 aa6.22□□□□□ -1.41
PNKP-208ENST00000596624 PRSS2P07478 247 aa6.22□□□□□ -1.41
PNKP-208ENST00000596624 CXCL5P42830 114 aa6.22□□□□□ -1.41
PNKP-208ENST00000596624 CKS1BP61024 79 aa6.22□□□□□ -1.41
PNKP-208ENST00000596624 MRPL55Q7Z7F7 128 aaKnown RBP6.22□□□□□ -1.41
PNKP-208ENST00000596624 KRTAP13-1Q8IUC0 172 aa6.22□□□□□ -1.41
PNKP-208ENST00000596624 TIMM17AQ99595 171 aa6.22□□□□□ -1.41
PNKP-208ENST00000596624 ALKBH7Q9BT30 221 aaPredicted RBP6.22□□□□□ -1.41
PNKP-208ENST00000596624 XAGE1AQ9HD64 81 aa6.22□□□□□ -1.41
PNKP-208ENST00000596624 CDKN2A-AS1Q9UH64 79 aa6.22□□□□□ -1.41
PNKP-208ENST00000596624 FAT4Q6V0I7 4981 aa6.22□□□□□ -1.41
PNKP-208ENST00000596624 IGLV5-45A0A087WSX0 123 aa6.21□□□□□ -1.42
PNKP-208ENST00000596624 A0A0U1RQV1 116 aa6.21□□□□□ -1.42
PNKP-208ENST00000596624 LOC389332A0A1B0GUA5 103 aa6.21□□□□□ -1.42
PNKP-208ENST00000596624 RPL28P46779 137 aaKnown RBP6.21□□□□□ -1.42
PNKP-208ENST00000596624 CTAG1AP78358 180 aa6.21□□□□□ -1.42
PNKP-208ENST00000596624 PNRC1Q12796 327 aaPredicted RBP6.21□□□□□ -1.42
PNKP-208ENST00000596624 PAPPA-AS1Q5QFB9 102 aa6.21□□□□□ -1.42
PNKP-208ENST00000596624 LINC00469Q8N7U9 141 aa6.21□□□□□ -1.42
PNKP-208ENST00000596624 ANAPC16Q96DE5 110 aa6.21□□□□□ -1.42
PNKP-208ENST00000596624 NXT2Q9NPJ8 142 aaKnown RBP6.21□□□□□ -1.42
PNKP-208ENST00000596624 CRYGAP11844 174 aa6.2□□□□□ -1.42
PNKP-208ENST00000596624 G0S2P27469 103 aa6.2□□□□□ -1.42
PNKP-208ENST00000596624 TOMM6Q96B49 74 aa6.2□□□□□ -1.42
PNKP-208ENST00000596624 KRTAP9-2Q9BYQ4 174 aa6.2□□□□□ -1.42
PNKP-208ENST00000596624 TOMM7Q9P0U1 55 aa6.2□□□□□ -1.42
PNKP-208ENST00000596624 SMIM1B2RUZ4 78 aa6.19□□□□□ -1.42
PNKP-208ENST00000596624 LINC00167Q96N53 147 aa6.19□□□□□ -1.42
PNKP-208ENST00000596624 MUC17Q685J3 4493 aa6.18□□□□□ -1.42
PNKP-208ENST00000596624 LINC01546A6NGU7 62 aa6.18□□□□□ -1.42
PNKP-208ENST00000596624 MT-ND4LP03901 98 aa6.18□□□□□ -1.42
PNKP-208ENST00000596624 FAM229BQ4G0N7 80 aa6.18□□□□□ -1.42
PNKP-208ENST00000596624 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
PNKP-208ENST00000596624 PDZD11Q5EBL8 140 aa6.18□□□□□ -1.42
PNKP-208ENST00000596624 ERASQ7Z444 233 aa6.18□□□□□ -1.42
PNKP-208ENST00000596624 TYMSOSQ8TAI1 123 aa6.18□□□□□ -1.42
PNKP-208ENST00000596624 TINCRA0A1B0GVN0 87 aa6.17□□□□□ -1.42
PNKP-208ENST00000596624 TSPAN13O95857 204 aa6.17□□□□□ -1.42
PNKP-208ENST00000596624 GEMIN7Q9H840 131 aaKnown RBP6.17□□□□□ -1.42
PNKP-208ENST00000596624 LINC01549A6NIU2 74 aa6.16□□□□□ -1.42
PNKP-208ENST00000596624 TPRXLQ17RH7 258 aa6.15□□□□□ -1.42
PNKP-208ENST00000596624 COX7B2Q8TF08 81 aa6.15□□□□□ -1.42
PNKP-208ENST00000596624 RPL37AP8A6NKH3 93 aa6.14□□□□□ -1.43
PNKP-208ENST00000596624 TRAV9-1A0A075B6T8 112 aa6.13□□□□□ -1.43
PNKP-208ENST00000596624 ADCYAP1P18509 176 aa6.13□□□□□ -1.43
PNKP-208ENST00000596624 CST9LQ9H4G1 147 aa6.13□□□□□ -1.43
PNKP-208ENST00000596624 ANAPC11Q9NYG5 84 aa6.13□□□□□ -1.43
PNKP-208ENST00000596624 IGLV5-39A0A0G2JS06 123 aa6.12□□□□□ -1.43
PNKP-208ENST00000596624 LINC00304Q8N9R0 145 aa6.12□□□□□ -1.43
PNKP-208ENST00000596624 SCGB3A1Q96QR1 104 aa6.12□□□□□ -1.43
PNKP-208ENST00000596624 MRPL18Q9H0U6 180 aaKnown RBP6.12□□□□□ -1.43
PNKP-208ENST00000596624 VPREB1P12018 145 aa6.11□□□□□ -1.43
PNKP-208ENST00000596624 GAGE10A6NGK3 116 aa6.1□□□□□ -1.43
PNKP-208ENST00000596624 UBE2AP49459 152 aa6.1□□□□□ -1.43
PNKP-208ENST00000596624 PMVKQ15126 192 aa6.1□□□□□ -1.43
PNKP-208ENST00000596624 KIAA1644Q3SXP7 199 aa6.1□□□□□ -1.43
PNKP-208ENST00000596624 SPINK8P0C7L1 97 aa6.09□□□□□ -1.43
PNKP-208ENST00000596624 NKAPP1Q8N9T2 125 aa6.09□□□□□ -1.43
PNKP-208ENST00000596624 PLEKHB2Q96CS7 222 aa6.09□□□□□ -1.43
PNKP-208ENST00000596624 GNB1LQ9BYB4 327 aa6.09□□□□□ -1.43
PNKP-208ENST00000596624 IGLV7-46A0A075B6I9 117 aa6.08□□□□□ -1.44
PNKP-208ENST00000596624 M0R378 163 aa6.08□□□□□ -1.44
PNKP-208ENST00000596624 ATP5LO75964 103 aa6.08□□□□□ -1.44
PNKP-208ENST00000596624 IGLC3P0DOY3 106 aa6.08□□□□□ -1.44
PNKP-208ENST00000596624 RAB5BP61020 215 aa6.08□□□□□ -1.44
PNKP-208ENST00000596624 COX17Q14061 63 aa6.08□□□□□ -1.44
PNKP-208ENST00000596624 TMEM126AQ9H061 195 aa6.08□□□□□ -1.44
PNKP-208ENST00000596624 IGKV2-28A0A075B6P5 120 aa6.07□□□□□ -1.44
PNKP-208ENST00000596624 IGKV2D-26A0A0A0MRZ7 120 aa6.07□□□□□ -1.44
PNKP-208ENST00000596624 H3BRM9 83 aa6.07□□□□□ -1.44
PNKP-208ENST00000596624 SCO1O75880 301 aa6.07□□□□□ -1.44
PNKP-208ENST00000596624 IGKV2D-28P01615 120 aa6.07□□□□□ -1.44
PNKP-208ENST00000596624 Q8NDZ9 215 aa6.07□□□□□ -1.44
PNKP-208ENST00000596624 RETNLBQ9BQ08 111 aa6.07□□□□□ -1.44
PNKP-208ENST00000596624 SND1-IT1Q9HBX3 110 aa6.07□□□□□ -1.44
PNKP-208ENST00000596624 A0A096LNJ9 63 aa6.06□□□□□ -1.44
PNKP-208ENST00000596624 PRLHP81277 87 aa6.06□□□□□ -1.44
PNKP-208ENST00000596624 COX19Q49B96 90 aa6.06□□□□□ -1.44
PNKP-208ENST00000596624 TMEM238C9JI98 176 aa6.05□□□□□ -1.44
PNKP-208ENST00000596624 ZNF22P17026 224 aaPredicted RBP6.05□□□□□ -1.44
PNKP-208ENST00000596624 RAB14P61106 215 aa6.05□□□□□ -1.44
PNKP-208ENST00000596624 RPL24P83731 157 aaKnown RBP6.05□□□□□ -1.44
PNKP-208ENST00000596624 CLLU1Q5K131 121 aa6.05□□□□□ -1.44
PNKP-208ENST00000596624 SPAG11AQ6PDA7 123 aa6.05□□□□□ -1.44
PNKP-208ENST00000596624 UQCC3Q6UW78 93 aa6.05□□□□□ -1.44
PNKP-208ENST00000596624 CDIP1Q9H305 208 aa6.05□□□□□ -1.44
PNKP-208ENST00000596624 ERG28Q9UKR5 140 aa6.05□□□□□ -1.44
PNKP-208ENST00000596624 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
PNKP-208ENST00000596624 TMEM218A2RU14 115 aa6.04□□□□□ -1.44
PNKP-208ENST00000596624 PFN2P35080 140 aa6.04□□□□□ -1.44
PNKP-208ENST00000596624 SFTA2Q6UW10 78 aa6.04□□□□□ -1.44
PNKP-208ENST00000596624 FP248Q71RG6 208 aaPredicted RBP6.04□□□□□ -1.44
PNKP-208ENST00000596624 FAM19A1Q7Z5A9 133 aa6.04□□□□□ -1.44
PNKP-208ENST00000596624 C3orf22Q8N5N4 141 aa6.04□□□□□ -1.44
PNKP-208ENST00000596624 ZNF625Q96I27 306 aaPredicted RBP6.04□□□□□ -1.44
PNKP-208ENST00000596624 URB1-AS1Q96HZ7 61 aa6.03□□□□□ -1.44
PNKP-208ENST00000596624 PPDPFQ9H3Y8 114 aa6.03□□□□□ -1.44
PNKP-208ENST00000596624 NDUFA5Q16718 116 aa6.02□□□□□ -1.45
PNKP-208ENST00000596624 FA2HQ7L5A8 372 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms