RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ATP5G1P05496 136 aa11.51□□□□□ -0.57
LIG1-206ENST00000594067 C9orf153Q5TBE3 101 aa11.51□□□□□ -0.57
LIG1-206ENST00000594067 A0A087WZ39 114 aa11.5□□□□□ -0.57
LIG1-206ENST00000594067 LINC00526Q96FQ7 95 aa11.49□□□□□ -0.57
LIG1-206ENST00000594067 LINC00959A0A1B0GUT2 108 aa11.49□□□□□ -0.57
LIG1-206ENST00000594067 DNAL4O96015 105 aa11.48□□□□□ -0.57
LIG1-206ENST00000594067 GYPEP15421 78 aa11.47□□□□□ -0.57
LIG1-206ENST00000594067 IBA57-AS1B1ANH7 110 aa11.47□□□□□ -0.57
LIG1-206ENST00000594067 XCL1P47992 114 aa11.47□□□□□ -0.57
LIG1-206ENST00000594067 HIST1H4AP62805 103 aaKnown RBP11.47□□□□□ -0.57
LIG1-206ENST00000594067 C14orf132Q9NPU4 83 aa11.47□□□□□ -0.57
LIG1-206ENST00000594067 H0YGX0 51 aa11.46□□□□□ -0.57
LIG1-206ENST00000594067 CLPSL2Q6UWE3 100 aa11.46□□□□□ -0.57
LIG1-206ENST00000594067 OBSCN-AS1Q96MR7 158 aa11.46□□□□□ -0.57
LIG1-206ENST00000594067 A0A096LPF7 62 aa11.46□□□□□ -0.58
LIG1-206ENST00000594067 C6orf226Q5I0X4 101 aa11.46□□□□□ -0.58
LIG1-206ENST00000594067 C2orf48Q96LS8 159 aa11.46□□□□□ -0.58
LIG1-206ENST00000594067 FN1P02751 2386 aaKnown RBP11.46□□□□□ -0.58
LIG1-206ENST00000594067 PAX4O43316 350 aa11.45□□□□□ -0.58
LIG1-206ENST00000594067 COX7CP15954 63 aa11.45□□□□□ -0.58
LIG1-206ENST00000594067 CFAP161Q6P656 301 aa11.44□□□□□ -0.58
LIG1-206ENST00000594067 OR13C6PQ8NH95 151 aa11.44□□□□□ -0.58
LIG1-206ENST00000594067 KIR2DL5BQ8NHK3 375 aa11.44□□□□□ -0.58
LIG1-206ENST00000594067 PDZD2O15018 2839 aa11.44□□□□□ -0.58
LIG1-206ENST00000594067 KLK5Q9Y337 293 aaPredicted RBP11.43□□□□□ -0.58
LIG1-206ENST00000594067 TENM4Q6N022 2769 aa11.43□□□□□ -0.58
LIG1-206ENST00000594067 LECT2O14960 151 aa11.43□□□□□ -0.58
LIG1-206ENST00000594067 KRTAP10-3P60369 221 aa11.43□□□□□ -0.58
LIG1-206ENST00000594067 LINC00846Q9NV44 126 aa11.43□□□□□ -0.58
LIG1-206ENST00000594067 HILS1P60008 231 aa11.42□□□□□ -0.58
LIG1-206ENST00000594067 SS18Q15532 418 aa11.42□□□□□ -0.58
LIG1-206ENST00000594067 LINC00612Q8N6U2 182 aa11.42□□□□□ -0.58
LIG1-206ENST00000594067 ATOX1O00244 68 aa11.41□□□□□ -0.58
LIG1-206ENST00000594067 X6R8D5 127 aa11.41□□□□□ -0.58
LIG1-206ENST00000594067 IGKV3D-7A0A0C4DH55 119 aa11.4□□□□□ -0.59
LIG1-206ENST00000594067 NCR3O14931 201 aa11.4□□□□□ -0.59
LIG1-206ENST00000594067 SLPIP03973 132 aa11.4□□□□□ -0.59
LIG1-206ENST00000594067 CRYGAP11844 174 aa11.39□□□□□ -0.59
LIG1-206ENST00000594067 NBEAL2Q6ZNJ1 2754 aa11.39□□□□□ -0.59
LIG1-206ENST00000594067 Q6JHZ5 121 aa11.39□□□□□ -0.59
LIG1-206ENST00000594067 SMR3AQ99954 134 aa11.39□□□□□ -0.59
LIG1-206ENST00000594067 PRO0255Q9UI72 69 aa11.39□□□□□ -0.59
LIG1-206ENST00000594067 A0A1B0GUV1 79 aa11.38□□□□□ -0.59
LIG1-206ENST00000594067 RPL18AQ02543 176 aaKnown RBP11.38□□□□□ -0.59
LIG1-206ENST00000594067 LINC00482Q8N8I6 264 aa11.38□□□□□ -0.59
LIG1-206ENST00000594067 GCN1Q92616 2671 aaKnown RBP11.38□□□□□ -0.59
LIG1-206ENST00000594067 LY6G6DO95868 133 aa11.37□□□□□ -0.59
LIG1-206ENST00000594067 Q8IZM0 81 aa11.37□□□□□ -0.59
LIG1-206ENST00000594067 DEFB4AO15263 64 aa11.37□□□□□ -0.59
LIG1-206ENST00000594067 ITPR2Q14571 2701 aa11.36□□□□□ -0.59
LIG1-206ENST00000594067 SPATA3Q8NHX4 192 aa11.36□□□□□ -0.59
LIG1-206ENST00000594067 LINC00269Q8N2A0 174 aa11.35□□□□□ -0.59
LIG1-206ENST00000594067 Q8N3U1 123 aa11.35□□□□□ -0.59
LIG1-206ENST00000594067 A0A087WVE0 104 aa11.35□□□□□ -0.59
LIG1-206ENST00000594067 PRR3P79522 188 aaKnown RBP11.35□□□□□ -0.59
LIG1-206ENST00000594067 IGLV10-54A0A075B6I4 117 aa11.34□□□□□ -0.59
LIG1-206ENST00000594067 LOC107984640A0A0U1RRK4 108 aa11.34□□□□□ -0.59
LIG1-206ENST00000594067 hADV29S1A0JD25 119 aa11.34□□□□□ -0.59
LIG1-206ENST00000594067 CYSTM1Q9H1C7 97 aa11.34□□□□□ -0.59
LIG1-206ENST00000594067 A0A1B0GX51 115 aa11.34□□□□□ -0.59
LIG1-206ENST00000594067 LINC01561Q8N1V8 128 aa11.34□□□□□ -0.59
LIG1-206ENST00000594067 ORMDL1Q9P0S3 153 aa11.34□□□□□ -0.59
LIG1-206ENST00000594067 SMIM9A6NGZ8 99 aa11.32□□□□□ -0.6
LIG1-206ENST00000594067 CCKP06307 115 aa11.32□□□□□ -0.6
LIG1-206ENST00000594067 DEFB135Q30KP9 77 aa11.32□□□□□ -0.6
LIG1-206ENST00000594067 NANOS2P60321 138 aaKnown RBP11.31□□□□□ -0.6
LIG1-206ENST00000594067 KIAA0087Q14695 138 aa11.31□□□□□ -0.6
LIG1-206ENST00000594067 CHCHD10Q8WYQ3 142 aaPredicted RBP11.31□□□□□ -0.6
LIG1-206ENST00000594067 ANGP03950 147 aaKnown RBP11.31□□□□□ -0.6
LIG1-206ENST00000594067 C9orf116Q5BN46 136 aaPredicted RBP11.31□□□□□ -0.6
LIG1-206ENST00000594067 LINC00167Q96N53 147 aa11.31□□□□□ -0.6
LIG1-206ENST00000594067 HIVEP2P31629 2446 aa11.3□□□□□ -0.6
LIG1-206ENST00000594067 CD164L2Q6UWJ8 174 aa11.3□□□□□ -0.6
LIG1-206ENST00000594067 SERP2Q8N6R1 65 aa11.3□□□□□ -0.6
LIG1-206ENST00000594067 UPK3BQ9BT76 320 aa11.29□□□□□ -0.6
LIG1-206ENST00000594067 LYRM9A8MSI8 78 aa11.29□□□□□ -0.6
LIG1-206ENST00000594067 USP17L23D6RBM5 183 aa11.29□□□□□ -0.6
LIG1-206ENST00000594067 REG3AQ06141 175 aa11.28□□□□□ -0.6
LIG1-206ENST00000594067 VWFP04275 2813 aa11.28□□□□□ -0.6
LIG1-206ENST00000594067 J3KT08 172 aa11.28□□□□□ -0.6
LIG1-206ENST00000594067 Q8N814 137 aa11.28□□□□□ -0.6
LIG1-206ENST00000594067 IGHV4-28A0A0C4DH34 117 aa11.26□□□□□ -0.61
LIG1-206ENST00000594067 JMJD7-PLA2G4BH0Y9G9 81 aa11.26□□□□□ -0.61
LIG1-206ENST00000594067 DAD1P61803 113 aa11.26□□□□□ -0.61
LIG1-206ENST00000594067 RPS28P62857 69 aaKnown RBP11.25□□□□□ -0.61
LIG1-206ENST00000594067 Q8NDZ9 215 aa11.25□□□□□ -0.61
LIG1-206ENST00000594067 CELA1Q9UNI1 258 aa11.25□□□□□ -0.61
LIG1-206ENST00000594067 C9orf66Q5T8R8 295 aa11.24□□□□□ -0.61
LIG1-206ENST00000594067 UNC79Q9P2D8 2635 aa11.24□□□□□ -0.61
LIG1-206ENST00000594067 TMEM256-PLSCR3K7ERE1 68 aa11.24□□□□□ -0.61
LIG1-206ENST00000594067 FAM19A5Q7Z5A7 132 aaPredicted RBP11.24□□□□□ -0.61
LIG1-206ENST00000594067 NDUFC2O95298 119 aa11.23□□□□□ -0.61
LIG1-206ENST00000594067 HTN3P15516 51 aa11.23□□□□□ -0.61
LIG1-206ENST00000594067 COX17Q14061 63 aa11.23□□□□□ -0.61
LIG1-206ENST00000594067 FASNP49327 2511 aaKnown RBP11.23□□□□□ -0.61
LIG1-206ENST00000594067 C6orf223Q8N319 242 aa11.22□□□□□ -0.61
LIG1-206ENST00000594067 S100A7L2Q5SY68 101 aa11.22□□□□□ -0.61
LIG1-206ENST00000594067 C10orf25Q5T742 122 aa11.22□□□□□ -0.61
LIG1-206ENST00000594067 TMEM258P61165 79 aa11.21□□□□□ -0.61
LIG1-206ENST00000594067 LYPD5Q6UWN5 251 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms