RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 SPANXDQ9BXN6 97 aa9.04□□□□□ -0.96
VRK3-205ENST00000593919 SPANXCQ9NY87 97 aa9.04□□□□□ -0.96
VRK3-205ENST00000593919 TENM2Q9NT68 2774 aa9.04□□□□□ -0.96
VRK3-205ENST00000593919 IGLV5-39A0A0G2JS06 123 aa9.03□□□□□ -0.96
VRK3-205ENST00000593919 H7C2G1 150 aa9.03□□□□□ -0.96
VRK3-205ENST00000593919 NDUFA1O15239 70 aa9.03□□□□□ -0.96
VRK3-205ENST00000593919 WFDC2Q14508 124 aa9.03□□□□□ -0.96
VRK3-205ENST00000593919 MIAQ16674 131 aa9.03□□□□□ -0.96
VRK3-205ENST00000593919 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.03□□□□□ -0.96
VRK3-205ENST00000593919 A0A0B4J2C4 111 aa9.03□□□□□ -0.96
VRK3-205ENST00000593919 F8W1H4 67 aa9.03□□□□□ -0.96
VRK3-205ENST00000593919 LYRM7Q5U5X0 104 aa9.02□□□□□ -0.97
VRK3-205ENST00000593919 WFDC10BQ8IUB3 73 aa9.02□□□□□ -0.97
VRK3-205ENST00000593919 Q9H8V8 135 aa9.02□□□□□ -0.97
VRK3-205ENST00000593919 IGHV3-33P01772 117 aa9.01□□□□□ -0.97
VRK3-205ENST00000593919 DAND5Q8N907 189 aa9.01□□□□□ -0.97
VRK3-205ENST00000593919 ZNF625Q96I27 306 aaPredicted RBP9.01□□□□□ -0.97
VRK3-205ENST00000593919 STARD9Q9P2P6 4700 aa9.01□□□□□ -0.97
VRK3-205ENST00000593919 ERG28Q9UKR5 140 aa9.01□□□□□ -0.97
VRK3-205ENST00000593919 TIMM17BO60830 172 aa9□□□□□ -0.97
VRK3-205ENST00000593919 ANGP03950 147 aaKnown RBP9□□□□□ -0.97
VRK3-205ENST00000593919 SCGB1C2P0DMR2 95 aa9□□□□□ -0.97
VRK3-205ENST00000593919 Q1RN00 199 aa9□□□□□ -0.97
VRK3-205ENST00000593919 CLPSL2Q6UWE3 100 aa9□□□□□ -0.97
VRK3-205ENST00000593919 PRO0461Q9UI25 63 aa9□□□□□ -0.97
VRK3-205ENST00000593919 A0A0U1RRA0 63 aa8.99□□□□□ -0.97
VRK3-205ENST00000593919 TCL1BO95988 128 aa8.99□□□□□ -0.97
VRK3-205ENST00000593919 LINC00269Q8N2A0 174 aa8.99□□□□□ -0.97
VRK3-205ENST00000593919 SIGMAR1Q99720 223 aa8.99□□□□□ -0.97
VRK3-205ENST00000593919 CIRBPQ14011 172 aaKnown RBP8.98□□□□□ -0.97
VRK3-205ENST00000593919 PLECQ15149 4684 aaKnown RBP8.98□□□□□ -0.97
VRK3-205ENST00000593919 LINC00959A0A1B0GUT2 108 aa8.97□□□□□ -0.97
VRK3-205ENST00000593919 ETDBQ3ZM63 59 aa8.97□□□□□ -0.97
VRK3-205ENST00000593919 LINC00588Q9Y4M8 146 aa8.97□□□□□ -0.97
VRK3-205ENST00000593919 USP17L23D6RBM5 183 aa8.97□□□□□ -0.97
VRK3-205ENST00000593919 REG3AQ06141 175 aa8.97□□□□□ -0.97
VRK3-205ENST00000593919 MEIG1Q5JSS6 88 aa8.97□□□□□ -0.97
VRK3-205ENST00000593919 TRBV20-1A0A075B6N2 111 aa8.96□□□□□ -0.98
VRK3-205ENST00000593919 IFITM1P13164 125 aa8.96□□□□□ -0.98
VRK3-205ENST00000593919 CCL18P55774 89 aa8.96□□□□□ -0.98
VRK3-205ENST00000593919 KLK12Q9UKR0 248 aa8.96□□□□□ -0.98
VRK3-205ENST00000593919 GAGE12HA6NDE8 117 aa8.95□□□□□ -0.98
VRK3-205ENST00000593919 NUPR2A6NF83 97 aa8.95□□□□□ -0.98
VRK3-205ENST00000593919 TOMM7Q9P0U1 55 aa8.95□□□□□ -0.98
VRK3-205ENST00000593919 SMCPP49901 116 aaPredicted RBP8.95□□□□□ -0.98
VRK3-205ENST00000593919 COX7B2Q8TF08 81 aa8.95□□□□□ -0.98
VRK3-205ENST00000593919 APLNQ9ULZ1 77 aa8.95□□□□□ -0.98
VRK3-205ENST00000593919 A0A1B0GV72 72 aa8.94□□□□□ -0.98
VRK3-205ENST00000593919 SS18Q15532 418 aa8.94□□□□□ -0.98
VRK3-205ENST00000593919 LINC01556Q5JQF7 62 aa8.94□□□□□ -0.98
VRK3-205ENST00000593919 LINC00308Q8TCZ7 52 aa8.94□□□□□ -0.98
VRK3-205ENST00000593919 PRR34Q9NV39 138 aa8.94□□□□□ -0.98
VRK3-205ENST00000593919 XCL1P47992 114 aa8.93□□□□□ -0.98
VRK3-205ENST00000593919 HERV-K104P63124 156 aa8.93□□□□□ -0.98
VRK3-205ENST00000593919 IGLV10-54A0A075B6I4 117 aa8.93□□□□□ -0.98
VRK3-205ENST00000593919 IGHV3OR16-9A0A0B4J2B5 98 aa8.93□□□□□ -0.98
VRK3-205ENST00000593919 TRIAP1O43715 76 aa8.93□□□□□ -0.98
VRK3-205ENST00000593919 RPL13AP40429 203 aaKnown RBP8.93□□□□□ -0.98
VRK3-205ENST00000593919 ENHOQ6UWT2 76 aa8.93□□□□□ -0.98
VRK3-205ENST00000593919 C5orf38Q86SI9 138 aa8.93□□□□□ -0.98
VRK3-205ENST00000593919 KLK5Q9Y337 293 aaPredicted RBP8.93□□□□□ -0.98
VRK3-205ENST00000593919 DNAH10OSP0CZ25 163 aa8.92□□□□□ -0.98
VRK3-205ENST00000593919 VPREB1P12018 145 aa8.92□□□□□ -0.98
VRK3-205ENST00000593919 SERTAD4-AS1Q5TG53 156 aa8.92□□□□□ -0.98
VRK3-205ENST00000593919 SOSTDC1Q6X4U4 206 aa8.92□□□□□ -0.98
VRK3-205ENST00000593919 UPK3BQ9BT76 320 aa8.92□□□□□ -0.98
VRK3-205ENST00000593919 TRBV30A0A0K0K1B3 111 aa8.91□□□□□ -0.98
VRK3-205ENST00000593919 CRPP02741 224 aa8.91□□□□□ -0.98
VRK3-205ENST00000593919 CHCHD10Q8WYQ3 142 aaPredicted RBP8.91□□□□□ -0.98
VRK3-205ENST00000593919 UBE2WQ96B02 151 aa8.91□□□□□ -0.98
VRK3-205ENST00000593919 A0A087WZ39 114 aa8.9□□□□□ -0.98
VRK3-205ENST00000593919 C9JAW5 83 aa8.9□□□□□ -0.99
VRK3-205ENST00000593919 COPS9Q8WXC6 57 aa8.9□□□□□ -0.99
VRK3-205ENST00000593919 J3QR89 54 aa8.89□□□□□ -0.99
VRK3-205ENST00000593919 ATXN8Q156A1 80 aa8.89□□□□□ -0.99
VRK3-205ENST00000593919 CD164L2Q6UWJ8 174 aa8.89□□□□□ -0.99
VRK3-205ENST00000593919 CKS1BP61024 79 aa8.88□□□□□ -0.99
VRK3-205ENST00000593919 DNAH1Q9P2D7 4330 aa8.88□□□□□ -0.99
VRK3-205ENST00000593919 UBE2DNLQ8IWF7 75 aa8.88□□□□□ -0.99
VRK3-205ENST00000593919 TRAV8-4A0A0B4J246 113 aa8.87□□□□□ -0.99
VRK3-205ENST00000593919 SLC25A20O43772 301 aa8.87□□□□□ -0.99
VRK3-205ENST00000593919 FOXI1Q12951 378 aa8.87□□□□□ -0.99
VRK3-205ENST00000593919 COX6CP09669 75 aa8.86□□□□□ -0.99
VRK3-205ENST00000593919 LINC01620Q4KN68 170 aa8.86□□□□□ -0.99
VRK3-205ENST00000593919 MIR7-3HGQ8N6C7 128 aa8.86□□□□□ -0.99
VRK3-205ENST00000593919 MUC7Q8TAX7 377 aa8.86□□□□□ -0.99
VRK3-205ENST00000593919 CLEC2BQ92478 149 aa8.86□□□□□ -0.99
VRK3-205ENST00000593919 LINC00158P58513 81 aa8.86□□□□□ -0.99
VRK3-205ENST00000593919 ANKRD29Q8N6D5 301 aa8.86□□□□□ -0.99
VRK3-205ENST00000593919 COX7A2LO14548 114 aa8.85□□□□□ -0.99
VRK3-205ENST00000593919 TEN1Q86WV5 123 aa8.85□□□□□ -0.99
VRK3-205ENST00000593919 SEC61GP60059 68 aa8.84□□□□□ -0.99
VRK3-205ENST00000593919 C6orf226Q5I0X4 101 aa8.84□□□□□ -0.99
VRK3-205ENST00000593919 IBA57-AS1B1ANH7 110 aa8.84□□□□□ -0.99
VRK3-205ENST00000593919 PFN2P35080 140 aa8.84□□□□□ -0.99
VRK3-205ENST00000593919 KRTAP26-1Q6PEX3 210 aa8.84□□□□□ -0.99
VRK3-205ENST00000593919 CARD19Q96LW7 228 aa8.84□□□□□ -0.99
VRK3-205ENST00000593919 WWC2-AS2Q96NR7 200 aa8.84□□□□□ -0.99
VRK3-205ENST00000593919 Q9HAA7 133 aa8.84□□□□□ -0.99
VRK3-205ENST00000593919 LINC01561Q8N1V8 128 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms