RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CDKN2A-AS1Q9UH64 79 aa9.63□□□□□ -0.87
LIG1-205ENST00000593425 ORMDL2Q53FV1 153 aa9.62□□□□□ -0.87
LIG1-205ENST00000593425 TP73-AS1Q9UF72 201 aa9.62□□□□□ -0.87
LIG1-205ENST00000593425 A0A0U1RQV1 116 aa9.61□□□□□ -0.87
LIG1-205ENST00000593425 F8VRH5 84 aa9.61□□□□□ -0.87
LIG1-205ENST00000593425 BCE1O60756 84 aa9.61□□□□□ -0.87
LIG1-205ENST00000593425 NPSP0C0P6 89 aa9.61□□□□□ -0.87
LIG1-205ENST00000593425 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
LIG1-205ENST00000593425 HERVK_113P63121 156 aa9.6□□□□□ -0.87
LIG1-205ENST00000593425 TYMSOSQ8TAI1 123 aa9.6□□□□□ -0.87
LIG1-205ENST00000593425 KRTAP9-2Q9BYQ4 174 aa9.6□□□□□ -0.87
LIG1-205ENST00000593425 A0A1B0GVG6 124 aa9.59□□□□□ -0.87
LIG1-205ENST00000593425 RPL37AP8A6NKH3 93 aa9.59□□□□□ -0.87
LIG1-205ENST00000593425 LINC00167Q96N53 147 aa9.59□□□□□ -0.87
LIG1-205ENST00000593425 CRYGAP11844 174 aa9.58□□□□□ -0.88
LIG1-205ENST00000593425 SEC11AP67812 179 aa9.58□□□□□ -0.88
LIG1-205ENST00000593425 GEMIN7Q9H840 131 aaKnown RBP9.58□□□□□ -0.88
LIG1-205ENST00000593425 ANAPC11Q9NYG5 84 aa9.58□□□□□ -0.88
LIG1-205ENST00000593425 SMIM1B2RUZ4 78 aa9.57□□□□□ -0.88
LIG1-205ENST00000593425 K7EMI3 77 aa9.57□□□□□ -0.88
LIG1-205ENST00000593425 CXCL5P42830 114 aa9.57□□□□□ -0.88
LIG1-205ENST00000593425 KRTAP13-2Q52LG2 175 aa9.57□□□□□ -0.88
LIG1-205ENST00000593425 FAT4Q6V0I7 4981 aa9.56□□□□□ -0.88
LIG1-205ENST00000593425 GAGE10A6NGK3 116 aa9.56□□□□□ -0.88
LIG1-205ENST00000593425 TIMM17AQ99595 171 aa9.56□□□□□ -0.88
LIG1-205ENST00000593425 NXT2Q9NPJ8 142 aaKnown RBP9.56□□□□□ -0.88
LIG1-205ENST00000593425 PAPPA-AS1Q5QFB9 102 aa9.55□□□□□ -0.88
LIG1-205ENST00000593425 LCE2AQ5TA79 106 aaPredicted RBP9.55□□□□□ -0.88
LIG1-205ENST00000593425 KRTAP13-1Q8IUC0 172 aa9.55□□□□□ -0.88
LIG1-205ENST00000593425 TOMM6Q96B49 74 aa9.55□□□□□ -0.88
LIG1-205ENST00000593425 ANAPC16Q96DE5 110 aa9.55□□□□□ -0.88
LIG1-205ENST00000593425 RETNLBQ9BQ08 111 aa9.55□□□□□ -0.88
LIG1-205ENST00000593425 PNRC1Q12796 327 aaPredicted RBP9.54□□□□□ -0.88
LIG1-205ENST00000593425 MUC17Q685J3 4493 aa9.54□□□□□ -0.88
LIG1-205ENST00000593425 COX7B2Q8TF08 81 aa9.53□□□□□ -0.88
LIG1-205ENST00000593425 IGLV5-37A0A075B6J1 123 aa9.52□□□□□ -0.89
LIG1-205ENST00000593425 MT-ND4LP03901 98 aa9.52□□□□□ -0.89
LIG1-205ENST00000593425 PDZD11Q5EBL8 140 aa9.52□□□□□ -0.89
LIG1-205ENST00000593425 IGLV5-45A0A087WSX0 123 aa9.51□□□□□ -0.89
LIG1-205ENST00000593425 SCO1O75880 301 aa9.51□□□□□ -0.89
LIG1-205ENST00000593425 ADCYAP1P18509 176 aa9.51□□□□□ -0.89
LIG1-205ENST00000593425 UBE2AP49459 152 aa9.51□□□□□ -0.89
LIG1-205ENST00000593425 RAB5BP61020 215 aa9.51□□□□□ -0.89
LIG1-205ENST00000593425 KIAA1644Q3SXP7 199 aa9.51□□□□□ -0.89
LIG1-205ENST00000593425 ERASQ7Z444 233 aa9.51□□□□□ -0.89
LIG1-205ENST00000593425 TINCRA0A1B0GVN0 87 aa9.5□□□□□ -0.89
LIG1-205ENST00000593425 G0S2P27469 103 aa9.5□□□□□ -0.89
LIG1-205ENST00000593425 SCGB3A1Q96QR1 104 aa9.5□□□□□ -0.89
LIG1-205ENST00000593425 SPINK8P0C7L1 97 aa9.49□□□□□ -0.89
LIG1-205ENST00000593425 LINC00304Q8N9R0 145 aa9.49□□□□□ -0.89
LIG1-205ENST00000593425 NKAPP1Q8N9T2 125 aa9.49□□□□□ -0.89
LIG1-205ENST00000593425 IGKV2-28A0A075B6P5 120 aa9.48□□□□□ -0.89
LIG1-205ENST00000593425 IGKV2D-28P01615 120 aa9.48□□□□□ -0.89
LIG1-205ENST00000593425 FAM229BQ4G0N7 80 aa9.48□□□□□ -0.89
LIG1-205ENST00000593425 PRLHP81277 87 aa9.46□□□□□ -0.9
LIG1-205ENST00000593425 CST9LQ9H4G1 147 aa9.46□□□□□ -0.9
LIG1-205ENST00000593425 TPRXLQ17RH7 258 aa9.45□□□□□ -0.9
LIG1-205ENST00000593425 CDIP1Q9H305 208 aa9.44□□□□□ -0.9
LIG1-205ENST00000593425 IGKV2D-26A0A0A0MRZ7 120 aa9.43□□□□□ -0.9
LIG1-205ENST00000593425 LINC01546A6NGU7 62 aa9.43□□□□□ -0.9
LIG1-205ENST00000593425 PFN2P35080 140 aa9.43□□□□□ -0.9
LIG1-205ENST00000593425 FAM19A1Q7Z5A9 133 aa9.43□□□□□ -0.9
LIG1-205ENST00000593425 IGLV7-46A0A075B6I9 117 aa9.42□□□□□ -0.9
LIG1-205ENST00000593425 TMEM238C9JI98 176 aa9.42□□□□□ -0.9
LIG1-205ENST00000593425 ATP5LO75964 103 aa9.42□□□□□ -0.9
LIG1-205ENST00000593425 VPREB1P12018 145 aa9.42□□□□□ -0.9
LIG1-205ENST00000593425 PMVKQ15126 192 aa9.42□□□□□ -0.9
LIG1-205ENST00000593425 TMEM126AQ9H061 195 aa9.42□□□□□ -0.9
LIG1-205ENST00000593425 MRPL18Q9H0U6 180 aaKnown RBP9.41□□□□□ -0.9
LIG1-205ENST00000593425 LINC01549A6NIU2 74 aa9.4□□□□□ -0.9
LIG1-205ENST00000593425 C3orf22Q8N5N4 141 aa9.4□□□□□ -0.9
LIG1-205ENST00000593425 Q8NDZ9 215 aa9.4□□□□□ -0.9
LIG1-205ENST00000593425 SND1-IT1Q9HBX3 110 aa9.4□□□□□ -0.9
LIG1-205ENST00000593425 IGLV5-39A0A0G2JS06 123 aa9.39□□□□□ -0.91
LIG1-205ENST00000593425 H3BRM9 83 aa9.39□□□□□ -0.91
LIG1-205ENST00000593425 M0R378 163 aa9.39□□□□□ -0.91
LIG1-205ENST00000593425 IGLC3P0DOY3 106 aa9.38□□□□□ -0.91
LIG1-205ENST00000593425 ERG28Q9UKR5 140 aa9.38□□□□□ -0.91
LIG1-205ENST00000593425 TRAV9-1A0A075B6T8 112 aa9.37□□□□□ -0.91
LIG1-205ENST00000593425 PLEKHB2Q96CS7 222 aa9.37□□□□□ -0.91
LIG1-205ENST00000593425 KRTAP9-6A0A140TA67 174 aa9.36□□□□□ -0.91
LIG1-205ENST00000593425 ZNF22P17026 224 aaPredicted RBP9.36□□□□□ -0.91
LIG1-205ENST00000593425 RAB14P61106 215 aa9.36□□□□□ -0.91
LIG1-205ENST00000593425 CTAG1AP78358 180 aa9.36□□□□□ -0.91
LIG1-205ENST00000593425 ZNF625Q96I27 306 aaPredicted RBP9.36□□□□□ -0.91
LIG1-205ENST00000593425 GNB1LQ9BYB4 327 aa9.36□□□□□ -0.91
LIG1-205ENST00000593425 PPDPFQ9H3Y8 114 aa9.36□□□□□ -0.91
LIG1-205ENST00000593425 FA2HQ7L5A8 372 aa9.35□□□□□ -0.91
LIG1-205ENST00000593425 CBLN2Q8IUK8 224 aa9.35□□□□□ -0.91
LIG1-205ENST00000593425 SMCO4Q9NRQ5 59 aa9.35□□□□□ -0.91
LIG1-205ENST00000593425 A0A096LNJ9 63 aa9.34□□□□□ -0.91
LIG1-205ENST00000593425 RPL24P83731 157 aaKnown RBP9.34□□□□□ -0.91
LIG1-205ENST00000593425 HIGD2AQ9BW72 106 aa9.34□□□□□ -0.91
LIG1-205ENST00000593425 COX17Q14061 63 aa9.33□□□□□ -0.92
LIG1-205ENST00000593425 NDUFA6P56556 154 aa9.32□□□□□ -0.92
LIG1-205ENST00000593425 SPRR4Q96PI1 79 aa9.31□□□□□ -0.92
LIG1-205ENST00000593425 S100PP25815 95 aa9.3□□□□□ -0.92
LIG1-205ENST00000593425 FABP9Q0Z7S8 132 aa9.3□□□□□ -0.92
LIG1-205ENST00000593425 CLLU1Q5K131 121 aa9.3□□□□□ -0.92
LIG1-205ENST00000593425 URB1-AS1Q96HZ7 61 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms