RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 C6orf226Q5I0X4 101 aa10.87□□□□□ -0.67
CIRBP-243ENST00000593128 C9orf129Q5T035 196 aaKnown RBP10.87□□□□□ -0.67
CIRBP-243ENST00000593128 LINC00173Q6ZV60 143 aa10.87□□□□□ -0.67
CIRBP-243ENST00000593128 ALKBH7Q9BT30 221 aaPredicted RBP10.86□□□□□ -0.67
CIRBP-243ENST00000593128 LINC01561Q8N1V8 128 aa10.85□□□□□ -0.67
CIRBP-243ENST00000593128 AMELXQ99217 191 aa10.85□□□□□ -0.67
CIRBP-243ENST00000593128 GEMIN7Q9H840 131 aaKnown RBP10.84□□□□□ -0.67
CIRBP-243ENST00000593128 NXT2Q9NPJ8 142 aaKnown RBP10.84□□□□□ -0.67
CIRBP-243ENST00000593128 IGIPA6NJ69 53 aa10.83□□□□□ -0.68
CIRBP-243ENST00000593128 KIAA1644Q3SXP7 199 aa10.83□□□□□ -0.68
CIRBP-243ENST00000593128 XAGE1AQ9HD64 81 aa10.83□□□□□ -0.68
CIRBP-243ENST00000593128 SCO1O75880 301 aa10.82□□□□□ -0.68
CIRBP-243ENST00000593128 LPAP08519 4548 aa10.81□□□□□ -0.68
CIRBP-243ENST00000593128 S100PP25815 95 aa10.81□□□□□ -0.68
CIRBP-243ENST00000593128 HERVK_113P63121 156 aa10.81□□□□□ -0.68
CIRBP-243ENST00000593128 PAPPA-AS1Q5QFB9 102 aa10.81□□□□□ -0.68
CIRBP-243ENST00000593128 CBLN2Q8IUK8 224 aa10.81□□□□□ -0.68
CIRBP-243ENST00000593128 Q8IZM0 81 aa10.81□□□□□ -0.68
CIRBP-243ENST00000593128 SMCO4Q9NRQ5 59 aa10.81□□□□□ -0.68
CIRBP-243ENST00000593128 CDKN2A-AS1Q9UH64 79 aa10.81□□□□□ -0.68
CIRBP-243ENST00000593128 K7EMI3 77 aa10.8□□□□□ -0.68
CIRBP-243ENST00000593128 SEC11AP67812 179 aa10.8□□□□□ -0.68
CIRBP-243ENST00000593128 C22orf24Q9Y442 160 aa10.8□□□□□ -0.68
CIRBP-243ENST00000593128 IGLV1-50A0A075B6I6 118 aa10.79□□□□□ -0.68
CIRBP-243ENST00000593128 TRAV9-1A0A075B6T8 112 aa10.79□□□□□ -0.68
CIRBP-243ENST00000593128 NPSP0C0P6 89 aa10.79□□□□□ -0.68
CIRBP-243ENST00000593128 G0S2P27469 103 aa10.79□□□□□ -0.68
CIRBP-243ENST00000593128 KRTAP1-4P0C5Y4 121 aa10.78□□□□□ -0.68
CIRBP-243ENST00000593128 TOMM6Q96B49 74 aa10.78□□□□□ -0.68
CIRBP-243ENST00000593128 YPEL4Q96NS1 127 aa10.78□□□□□ -0.68
CIRBP-243ENST00000593128 SCGB3A1Q96QR1 104 aa10.78□□□□□ -0.68
CIRBP-243ENST00000593128 F8VRH5 84 aa10.77□□□□□ -0.69
CIRBP-243ENST00000593128 LBHQ53QV2 105 aaPredicted RBP10.77□□□□□ -0.69
CIRBP-243ENST00000593128 FAM19A3Q7Z5A8 133 aa10.77□□□□□ -0.69
CIRBP-243ENST00000593128 TIMM17AQ99595 171 aa10.77□□□□□ -0.69
CIRBP-243ENST00000593128 PRR4Q16378 134 aa10.75□□□□□ -0.69
CIRBP-243ENST00000593128 ZNF861PO60384 105 aa10.74□□□□□ -0.69
CIRBP-243ENST00000593128 RPL13AP40429 203 aaKnown RBP10.74□□□□□ -0.69
CIRBP-243ENST00000593128 ERASQ7Z444 233 aa10.74□□□□□ -0.69
CIRBP-243ENST00000593128 NUPR1O60356 82 aa10.73□□□□□ -0.69
CIRBP-243ENST00000593128 MRPL55Q7Z7F7 128 aaKnown RBP10.73□□□□□ -0.69
CIRBP-243ENST00000593128 COX7B2Q8TF08 81 aa10.73□□□□□ -0.69
CIRBP-243ENST00000593128 GAGE10A6NGK3 116 aa10.72□□□□□ -0.69
CIRBP-243ENST00000593128 RPL37AP8A6NKH3 93 aa10.72□□□□□ -0.69
CIRBP-243ENST00000593128 SMIM1B2RUZ4 78 aa10.72□□□□□ -0.69
CIRBP-243ENST00000593128 CXCL5P42830 114 aa10.72□□□□□ -0.69
CIRBP-243ENST00000593128 RAB5BP61020 215 aa10.72□□□□□ -0.69
CIRBP-243ENST00000593128 COLCA2A8K830 154 aa10.71□□□□□ -0.69
CIRBP-243ENST00000593128 SPINK8P0C7L1 97 aa10.71□□□□□ -0.69
CIRBP-243ENST00000593128 TINCRA0A1B0GVN0 87 aa10.7□□□□□ -0.7
CIRBP-243ENST00000593128 PDZD11Q5EBL8 140 aa10.7□□□□□ -0.7
CIRBP-243ENST00000593128 TSPAN13O95857 204 aa10.69□□□□□ -0.7
CIRBP-243ENST00000593128 RPL28P46779 137 aaKnown RBP10.69□□□□□ -0.7
CIRBP-243ENST00000593128 COX19Q49B96 90 aa10.69□□□□□ -0.7
CIRBP-243ENST00000593128 FA2HQ7L5A8 372 aa10.69□□□□□ -0.7
CIRBP-243ENST00000593128 BCE1O60756 84 aa10.68□□□□□ -0.7
CIRBP-243ENST00000593128 LINC00167Q96N53 147 aa10.68□□□□□ -0.7
CIRBP-243ENST00000593128 GNB1LQ9BYB4 327 aa10.68□□□□□ -0.7
CIRBP-243ENST00000593128 CST9LQ9H4G1 147 aa10.68□□□□□ -0.7
CIRBP-243ENST00000593128 TP73-AS1Q9UF72 201 aa10.68□□□□□ -0.7
CIRBP-243ENST00000593128 NDUFA6P56556 154 aa10.66□□□□□ -0.7
CIRBP-243ENST00000593128 FABP9Q0Z7S8 132 aa10.66□□□□□ -0.7
CIRBP-243ENST00000593128 NKAPP1Q8N9T2 125 aa10.66□□□□□ -0.7
CIRBP-243ENST00000593128 PMVKQ15126 192 aa10.65□□□□□ -0.7
CIRBP-243ENST00000593128 MRPL18Q9H0U6 180 aaKnown RBP10.65□□□□□ -0.7
CIRBP-243ENST00000593128 IGLV5-45A0A087WSX0 123 aa10.64□□□□□ -0.71
CIRBP-243ENST00000593128 LINC01549A6NIU2 74 aa10.64□□□□□ -0.71
CIRBP-243ENST00000593128 H3BRM9 83 aa10.64□□□□□ -0.71
CIRBP-243ENST00000593128 ATP5LO75964 103 aa10.64□□□□□ -0.71
CIRBP-243ENST00000593128 UBE2AP49459 152 aa10.64□□□□□ -0.71
CIRBP-243ENST00000593128 TRAPPC1Q9Y5R8 145 aa10.64□□□□□ -0.71
CIRBP-243ENST00000593128 PFN2P35080 140 aa10.63□□□□□ -0.71
CIRBP-243ENST00000593128 A0A087X002 238 aa10.62□□□□□ -0.71
CIRBP-243ENST00000593128 TYMSOSQ8TAI1 123 aa10.62□□□□□ -0.71
CIRBP-243ENST00000593128 ANAPC11Q9NYG5 84 aa10.62□□□□□ -0.71
CIRBP-243ENST00000593128 IGKV2-28A0A075B6P5 120 aa10.61□□□□□ -0.71
CIRBP-243ENST00000593128 LINC01546A6NGU7 62 aa10.61□□□□□ -0.71
CIRBP-243ENST00000593128 IGKV2D-28P01615 120 aa10.61□□□□□ -0.71
CIRBP-243ENST00000593128 CRYGAP11844 174 aa10.61□□□□□ -0.71
CIRBP-243ENST00000593128 TRGC2P03986 189 aa10.59□□□□□ -0.71
CIRBP-243ENST00000593128 IGLV5-37A0A075B6J1 123 aa10.57□□□□□ -0.72
CIRBP-243ENST00000593128 ZNF625Q96I27 306 aaPredicted RBP10.57□□□□□ -0.72
CIRBP-243ENST00000593128 IGLC3P0DOY3 106 aa10.56□□□□□ -0.72
CIRBP-243ENST00000593128 PMCHL1Q16048 86 aa10.56□□□□□ -0.72
CIRBP-243ENST00000593128 ZNF22P17026 224 aaPredicted RBP10.54□□□□□ -0.72
CIRBP-243ENST00000593128 PRLHP81277 87 aa10.54□□□□□ -0.72
CIRBP-243ENST00000593128 FAM19A1Q7Z5A9 133 aa10.54□□□□□ -0.72
CIRBP-243ENST00000593128 SND1-IT1Q9HBX3 110 aa10.54□□□□□ -0.72
CIRBP-243ENST00000593128 ERG28Q9UKR5 140 aa10.54□□□□□ -0.72
CIRBP-243ENST00000593128 TMEM170BQ5T4T1 132 aa10.53□□□□□ -0.72
CIRBP-243ENST00000593128 A0A096LNJ9 63 aa10.52□□□□□ -0.73
CIRBP-243ENST00000593128 IGLV5-39A0A0G2JS06 123 aa10.52□□□□□ -0.73
CIRBP-243ENST00000593128 TMEM238C9JI98 176 aa10.52□□□□□ -0.73
CIRBP-243ENST00000593128 HBDP02042 147 aa10.52□□□□□ -0.73
CIRBP-243ENST00000593128 LINC00614P0C842 121 aa10.52□□□□□ -0.73
CIRBP-243ENST00000593128 KRTAP13-1Q8IUC0 172 aa10.52□□□□□ -0.73
CIRBP-243ENST00000593128 VPREB1P12018 145 aa10.51□□□□□ -0.73
CIRBP-243ENST00000593128 RPL24P83731 157 aaKnown RBP10.51□□□□□ -0.73
CIRBP-243ENST00000593128 KRTAP13-2Q52LG2 175 aa10.51□□□□□ -0.73
CIRBP-243ENST00000593128 BAGE3Q86Y29 109 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms