RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 KRTAP11-1Q8IUC1 163 aa14.19□□□□□ -0.14
MBD3-211ENST00000592965 TIMM17AQ99595 171 aa14.19□□□□□ -0.14
MBD3-211ENST00000592965 PRSS2P07478 247 aa14.18□□□□□ -0.14
MBD3-211ENST00000592965 DIRC1Q969H9 104 aa14.18□□□□□ -0.14
MBD3-211ENST00000592965 M0QXV9 152 aa14.17□□□□□ -0.14
MBD3-211ENST00000592965 HERVK_113P63121 156 aa14.17□□□□□ -0.14
MBD3-211ENST00000592965 SEC11AP67812 179 aa14.17□□□□□ -0.14
MBD3-211ENST00000592965 C9orf129Q5T035 196 aaKnown RBP14.17□□□□□ -0.14
MBD3-211ENST00000592965 Q8IZM0 81 aa14.17□□□□□ -0.14
MBD3-211ENST00000592965 SLC7A5P1Q8MH63 180 aa14.17□□□□□ -0.14
MBD3-211ENST00000592965 TOMM6Q96B49 74 aa14.17□□□□□ -0.14
MBD3-211ENST00000592965 ALKBH7Q9BT30 221 aaPredicted RBP14.17□□□□□ -0.14
MBD3-211ENST00000592965 TOMM7Q9P0U1 55 aa14.16□□□□□ -0.14
MBD3-211ENST00000592965 CKS1BP61024 79 aa14.15□□□□□ -0.14
MBD3-211ENST00000592965 COX19Q49B96 90 aa14.15□□□□□ -0.14
MBD3-211ENST00000592965 MRPL18Q9H0U6 180 aaKnown RBP14.15□□□□□ -0.14
MBD3-211ENST00000592965 CDKN2A-AS1Q9UH64 79 aa14.14□□□□□ -0.15
MBD3-211ENST00000592965 H0Y9J4 135 aa14.13□□□□□ -0.15
MBD3-211ENST00000592965 C6orf226Q5I0X4 101 aa14.13□□□□□ -0.15
MBD3-211ENST00000592965 GEMIN7Q9H840 131 aaKnown RBP14.13□□□□□ -0.15
MBD3-211ENST00000592965 UBE2BP63146 152 aa14.12□□□□□ -0.15
MBD3-211ENST00000592965 FABP9Q0Z7S8 132 aa14.12□□□□□ -0.15
MBD3-211ENST00000592965 ERASQ7Z444 233 aa14.12□□□□□ -0.15
MBD3-211ENST00000592965 YPEL4Q96NS1 127 aa14.11□□□□□ -0.15
MBD3-211ENST00000592965 RNF213Q63HN8 5207 aa14.11□□□□□ -0.15
MBD3-211ENST00000592965 SCGB3A1Q96QR1 104 aa14.1□□□□□ -0.15
MBD3-211ENST00000592965 LINC01546A6NGU7 62 aa14.09□□□□□ -0.15
MBD3-211ENST00000592965 LINC01549A6NIU2 74 aa14.08□□□□□ -0.16
MBD3-211ENST00000592965 F8VRH5 84 aa14.08□□□□□ -0.16
MBD3-211ENST00000592965 CXCL5P42830 114 aa14.07□□□□□ -0.16
MBD3-211ENST00000592965 LINC00469Q8N7U9 141 aa14.07□□□□□ -0.16
MBD3-211ENST00000592965 PRR26Q8N8Z3 221 aa14.06□□□□□ -0.16
MBD3-211ENST00000592965 TRAPPC1Q9Y5R8 145 aa14.06□□□□□ -0.16
MBD3-211ENST00000592965 IGLV5-45A0A087WSX0 123 aa14.05□□□□□ -0.16
MBD3-211ENST00000592965 TINCRA0A1B0GVN0 87 aa14.05□□□□□ -0.16
MBD3-211ENST00000592965 SMIM1B2RUZ4 78 aa14.05□□□□□ -0.16
MBD3-211ENST00000592965 URB1-AS1Q96HZ7 61 aa14.05□□□□□ -0.16
MBD3-211ENST00000592965 XAGE1AQ9HD64 81 aa14.05□□□□□ -0.16
MBD3-211ENST00000592965 IGLV1-50A0A075B6I6 118 aa14.03□□□□□ -0.16
MBD3-211ENST00000592965 KRTAP1-4P0C5Y4 121 aa14.03□□□□□ -0.16
MBD3-211ENST00000592965 PDZD11Q5EBL8 140 aa14.03□□□□□ -0.16
MBD3-211ENST00000592965 C22orf24Q9Y442 160 aa14.03□□□□□ -0.16
MBD3-211ENST00000592965 CBLN2Q8IUK8 224 aa14.02□□□□□ -0.17
MBD3-211ENST00000592965 C18orf32Q8TCD1 76 aa14.02□□□□□ -0.17
MBD3-211ENST00000592965 CST9LQ9H4G1 147 aa14.02□□□□□ -0.17
MBD3-211ENST00000592965 LBHQ53QV2 105 aaPredicted RBP14.01□□□□□ -0.17
MBD3-211ENST00000592965 TP73-AS1Q9UF72 201 aa14.01□□□□□ -0.17
MBD3-211ENST00000592965 NUPR1O60356 82 aa14□□□□□ -0.17
MBD3-211ENST00000592965 FA2HQ7L5A8 372 aa14□□□□□ -0.17
MBD3-211ENST00000592965 COX7B2Q8TF08 81 aa14□□□□□ -0.17
MBD3-211ENST00000592965 SMCO4Q9NRQ5 59 aa14□□□□□ -0.17
MBD3-211ENST00000592965 A0A096LNJ9 63 aa13.99□□□□□ -0.17
MBD3-211ENST00000592965 PMVKQ15126 192 aa13.99□□□□□ -0.17
MBD3-211ENST00000592965 ZNF861PO60384 105 aa13.97□□□□□ -0.17
MBD3-211ENST00000592965 MRPL55Q7Z7F7 128 aaKnown RBP13.96□□□□□ -0.17
MBD3-211ENST00000592965 SPINK8P0C7L1 97 aa13.95□□□□□ -0.18
MBD3-211ENST00000592965 RPL13AP40429 203 aaKnown RBP13.94□□□□□ -0.18
MBD3-211ENST00000592965 H3BRM9 83 aa13.93□□□□□ -0.18
MBD3-211ENST00000592965 LINC00614P0C842 121 aa13.93□□□□□ -0.18
MBD3-211ENST00000592965 PMCHL1Q16048 86 aa13.92□□□□□ -0.18
MBD3-211ENST00000592965 LPAP08519 4548 aa13.92□□□□□ -0.18
MBD3-211ENST00000592965 IGLC3P0DOY3 106 aa13.91□□□□□ -0.18
MBD3-211ENST00000592965 BCE1O60756 84 aa13.9□□□□□ -0.18
MBD3-211ENST00000592965 IGLV5-37A0A075B6J1 123 aa13.89□□□□□ -0.19
MBD3-211ENST00000592965 IGLV5-39A0A0G2JS06 123 aa13.88□□□□□ -0.19
MBD3-211ENST00000592965 LINC00167Q96N53 147 aa13.88□□□□□ -0.19
MBD3-211ENST00000592965 ATP5LO75964 103 aa13.87□□□□□ -0.19
MBD3-211ENST00000592965 RPL28P46779 137 aaKnown RBP13.87□□□□□ -0.19
MBD3-211ENST00000592965 COLCA2A8K830 154 aa13.86□□□□□ -0.19
MBD3-211ENST00000592965 HBDP02042 147 aa13.86□□□□□ -0.19
MBD3-211ENST00000592965 RAB5BP61020 215 aa13.86□□□□□ -0.19
MBD3-211ENST00000592965 RPL37AP8A6NKH3 93 aa13.85□□□□□ -0.19
MBD3-211ENST00000592965 ZNF22P17026 224 aaPredicted RBP13.85□□□□□ -0.19
MBD3-211ENST00000592965 NDUFA6P56556 154 aa13.84□□□□□ -0.19
MBD3-211ENST00000592965 GAGE10A6NGK3 116 aa13.83□□□□□ -0.2
MBD3-211ENST00000592965 TRGC2P03986 189 aa13.83□□□□□ -0.2
MBD3-211ENST00000592965 NKAPP1Q8N9T2 125 aa13.83□□□□□ -0.2
MBD3-211ENST00000592965 SCO1O75880 301 aa13.8□□□□□ -0.2
MBD3-211ENST00000592965 PFN2P35080 140 aa13.79□□□□□ -0.2
MBD3-211ENST00000592965 LINC00310P59036 64 aa13.79□□□□□ -0.2
MBD3-211ENST00000592965 KRTAP13-1Q8IUC0 172 aa13.79□□□□□ -0.2
MBD3-211ENST00000592965 CHCHD1Q96BP2 118 aaKnown RBP13.79□□□□□ -0.2
MBD3-211ENST00000592965 ERG28Q9UKR5 140 aa13.78□□□□□ -0.2
MBD3-211ENST00000592965 A0A087X002 238 aa13.77□□□□□ -0.21
MBD3-211ENST00000592965 COX17Q14061 63 aa13.77□□□□□ -0.21
MBD3-211ENST00000592965 C11orf86A6NJI1 115 aa13.76□□□□□ -0.21
MBD3-211ENST00000592965 SFTA2Q6UW10 78 aa13.76□□□□□ -0.21
MBD3-211ENST00000592965 BAGE3Q86Y29 109 aa13.76□□□□□ -0.21
MBD3-211ENST00000592965 SND1-IT1Q9HBX3 110 aa13.76□□□□□ -0.21
MBD3-211ENST00000592965 CRYGAP11844 174 aa13.75□□□□□ -0.21
MBD3-211ENST00000592965 VPREB1P12018 145 aa13.75□□□□□ -0.21
MBD3-211ENST00000592965 UBE2AP49459 152 aa13.74□□□□□ -0.21
MBD3-211ENST00000592965 FAM19A2Q8N3H0 131 aa13.74□□□□□ -0.21
MBD3-211ENST00000592965 IGKV2-28A0A075B6P5 120 aa13.73□□□□□ -0.21
MBD3-211ENST00000592965 IGKV2D-28P01615 120 aa13.73□□□□□ -0.21
MBD3-211ENST00000592965 TMEM170BQ5T4T1 132 aa13.73□□□□□ -0.21
MBD3-211ENST00000592965 PRR4Q16378 134 aa13.72□□□□□ -0.21
MBD3-211ENST00000592965 ZNF625Q96I27 306 aaPredicted RBP13.72□□□□□ -0.21
MBD3-211ENST00000592965 RPL24P83731 157 aaKnown RBP13.71□□□□□ -0.21
MBD3-211ENST00000592965 IFI27L1Q96BM0 104 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 1149.3 ms