RNA–Protein interactions for RNA: ENST00000592776.1

PTPN2-215, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 5

Gene PTPN2, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-215ENST00000592776 PRR26Q8N8Z3 221 aa13.33□□□□□ -0.28
PTPN2-215ENST00000592776 SCGB3A1Q96QR1 104 aa13.33□□□□□ -0.28
PTPN2-215ENST00000592776 GEMIN7Q9H840 131 aaKnown RBP13.33□□□□□ -0.28
PTPN2-215ENST00000592776 TRAV9-1A0A075B6T8 112 aa13.32□□□□□ -0.28
PTPN2-215ENST00000592776 DIRC1Q969H9 104 aa13.32□□□□□ -0.28
PTPN2-215ENST00000592776 XAGE1AQ9HD64 81 aa13.32□□□□□ -0.28
PTPN2-215ENST00000592776 G0S2P27469 103 aa13.31□□□□□ -0.28
PTPN2-215ENST00000592776 PAPPA-AS1Q5QFB9 102 aa13.31□□□□□ -0.28
PTPN2-215ENST00000592776 ERASQ7Z444 233 aa13.31□□□□□ -0.28
PTPN2-215ENST00000592776 SEC11CQ9BY50 192 aa13.31□□□□□ -0.28
PTPN2-215ENST00000592776 H0Y9J4 135 aa13.3□□□□□ -0.28
PTPN2-215ENST00000592776 SEC11AP67812 179 aa13.3□□□□□ -0.28
PTPN2-215ENST00000592776 GNB1LQ9BYB4 327 aa13.3□□□□□ -0.28
PTPN2-215ENST00000592776 S100PP25815 95 aa13.29□□□□□ -0.28
PTPN2-215ENST00000592776 COMMD7Q86VX2 200 aa13.28□□□□□ -0.28
PTPN2-215ENST00000592776 LINC01546A6NGU7 62 aa13.27□□□□□ -0.29
PTPN2-215ENST00000592776 SMIM1B2RUZ4 78 aa13.27□□□□□ -0.29
PTPN2-215ENST00000592776 C22orf24Q9Y442 160 aa13.27□□□□□ -0.29
PTPN2-215ENST00000592776 F8VRH5 84 aa13.26□□□□□ -0.29
PTPN2-215ENST00000592776 MRPL18Q9H0U6 180 aaKnown RBP13.26□□□□□ -0.29
PTPN2-215ENST00000592776 FABP9Q0Z7S8 132 aa13.25□□□□□ -0.29
PTPN2-215ENST00000592776 CST9LQ9H4G1 147 aa13.25□□□□□ -0.29
PTPN2-215ENST00000592776 TINCRA0A1B0GVN0 87 aa13.24□□□□□ -0.29
PTPN2-215ENST00000592776 KRTAP1-4P0C5Y4 121 aa13.24□□□□□ -0.29
PTPN2-215ENST00000592776 SPINK8P0C7L1 97 aa13.23□□□□□ -0.29
PTPN2-215ENST00000592776 FA2HQ7L5A8 372 aa13.23□□□□□ -0.29
PTPN2-215ENST00000592776 COX7B2Q8TF08 81 aa13.23□□□□□ -0.29
PTPN2-215ENST00000592776 RPS10P5Q9NQ39 176 aa13.23□□□□□ -0.29
PTPN2-215ENST00000592776 IGLV5-45A0A087WSX0 123 aa13.22□□□□□ -0.29
PTPN2-215ENST00000592776 PDZD11Q5EBL8 140 aa13.22□□□□□ -0.29
PTPN2-215ENST00000592776 C10orf91Q5T1B1 145 aa13.22□□□□□ -0.29
PTPN2-215ENST00000592776 CXCL5P42830 114 aa13.2□□□□□ -0.3
PTPN2-215ENST00000592776 PMVKQ15126 192 aa13.2□□□□□ -0.3
PTPN2-215ENST00000592776 SMCO4Q9NRQ5 59 aa13.2□□□□□ -0.3
PTPN2-215ENST00000592776 RAB5BP61020 215 aa13.19□□□□□ -0.3
PTPN2-215ENST00000592776 COX19Q49B96 90 aa13.19□□□□□ -0.3
PTPN2-215ENST00000592776 URB1-AS1Q96HZ7 61 aa13.18□□□□□ -0.3
PTPN2-215ENST00000592776 CARHSP1Q9Y2V2 147 aaKnown RBP13.18□□□□□ -0.3
PTPN2-215ENST00000592776 LPAP08519 4548 aa13.18□□□□□ -0.3
PTPN2-215ENST00000592776 A0A096LNJ9 63 aa13.17□□□□□ -0.3
PTPN2-215ENST00000592776 ZNF861PO60384 105 aa13.17□□□□□ -0.3
PTPN2-215ENST00000592776 LBHQ53QV2 105 aaPredicted RBP13.17□□□□□ -0.3
PTPN2-215ENST00000592776 IGLV1-50A0A075B6I6 118 aa13.16□□□□□ -0.3
PTPN2-215ENST00000592776 LINC01549A6NIU2 74 aa13.16□□□□□ -0.3
PTPN2-215ENST00000592776 RHEBQ15382 184 aa13.16□□□□□ -0.3
PTPN2-215ENST00000592776 MRPL55Q7Z7F7 128 aaKnown RBP13.16□□□□□ -0.3
PTPN2-215ENST00000592776 RPL37AP8A6NKH3 93 aa13.14□□□□□ -0.31
PTPN2-215ENST00000592776 NUPR1O60356 82 aa13.14□□□□□ -0.31
PTPN2-215ENST00000592776 NDUFA6P56556 154 aa13.14□□□□□ -0.31
PTPN2-215ENST00000592776 LINC00167Q96N53 147 aa13.14□□□□□ -0.31
PTPN2-215ENST00000592776 TP73-AS1Q9UF72 201 aa13.14□□□□□ -0.31
PTPN2-215ENST00000592776 RNF213Q63HN8 5207 aa13.13□□□□□ -0.31
PTPN2-215ENST00000592776 GAGE10A6NGK3 116 aa13.13□□□□□ -0.31
PTPN2-215ENST00000592776 PMCHL1Q16048 86 aa13.13□□□□□ -0.31
PTPN2-215ENST00000592776 C18orf32Q8TCD1 76 aa13.13□□□□□ -0.31
PTPN2-215ENST00000592776 TRAPPC1Q9Y5R8 145 aa13.13□□□□□ -0.31
PTPN2-215ENST00000592776 IGLC3P0DOY3 106 aa13.11□□□□□ -0.31
PTPN2-215ENST00000592776 SCO1O75880 301 aa13.1□□□□□ -0.31
PTPN2-215ENST00000592776 LINC00614P0C842 121 aa13.1□□□□□ -0.31
PTPN2-215ENST00000592776 H3BRM9 83 aa13.09□□□□□ -0.31
PTPN2-215ENST00000592776 BCE1O60756 84 aa13.09□□□□□ -0.31
PTPN2-215ENST00000592776 ZNF22P17026 224 aaPredicted RBP13.09□□□□□ -0.31
PTPN2-215ENST00000592776 PFN2P35080 140 aa13.08□□□□□ -0.32
PTPN2-215ENST00000592776 IGLV5-39A0A0G2JS06 123 aa13.07□□□□□ -0.32
PTPN2-215ENST00000592776 APOC3P02656 99 aa13.07□□□□□ -0.32
PTPN2-215ENST00000592776 ATP5LO75964 103 aa13.06□□□□□ -0.32
PTPN2-215ENST00000592776 HBDP02042 147 aa13.06□□□□□ -0.32
PTPN2-215ENST00000592776 IGLV5-37A0A075B6J1 123 aa13.05□□□□□ -0.32
PTPN2-215ENST00000592776 RPL28P46779 137 aaKnown RBP13.05□□□□□ -0.32
PTPN2-215ENST00000592776 RPL13AP40429 203 aaKnown RBP13.04□□□□□ -0.32
PTPN2-215ENST00000592776 ZNF625Q96I27 306 aaPredicted RBP13.04□□□□□ -0.32
PTPN2-215ENST00000592776 A0A087X002 238 aa13.03□□□□□ -0.32
PTPN2-215ENST00000592776 C11orf86A6NJI1 115 aa13.03□□□□□ -0.32
PTPN2-215ENST00000592776 BAGE3Q86Y29 109 aa13.03□□□□□ -0.32
PTPN2-215ENST00000592776 NKAPP1Q8N9T2 125 aa13.03□□□□□ -0.32
PTPN2-215ENST00000592776 ANAPC11Q9NYG5 84 aa13.03□□□□□ -0.32
PTPN2-215ENST00000592776 IGKV2-28A0A075B6P5 120 aa13.01□□□□□ -0.33
PTPN2-215ENST00000592776 IGKV2D-28P01615 120 aa13.01□□□□□ -0.33
PTPN2-215ENST00000592776 SND1-IT1Q9HBX3 110 aa13□□□□□ -0.33
PTPN2-215ENST00000592776 ERG28Q9UKR5 140 aa13□□□□□ -0.33
PTPN2-215ENST00000592776 TSPAN13O95857 204 aa12.99□□□□□ -0.33
PTPN2-215ENST00000592776 PRR4Q16378 134 aa12.99□□□□□ -0.33
PTPN2-215ENST00000592776 TMEM170BQ5T4T1 132 aa12.99□□□□□ -0.33
PTPN2-215ENST00000592776 KRTAP13-1Q8IUC0 172 aa12.99□□□□□ -0.33
PTPN2-215ENST00000592776 Q8NDZ9 215 aa12.99□□□□□ -0.33
PTPN2-215ENST00000592776 SNAPINO95295 136 aa12.98□□□□□ -0.33
PTPN2-215ENST00000592776 VPREB1P12018 145 aa12.98□□□□□ -0.33
PTPN2-215ENST00000592776 UBE2AP49459 152 aa12.97□□□□□ -0.33
PTPN2-215ENST00000592776 SVBPQ8N300 66 aa12.97□□□□□ -0.33
PTPN2-215ENST00000592776 YPEL4Q96NS1 127 aa12.97□□□□□ -0.33
PTPN2-215ENST00000592776 CHTOPQ9Y3Y2 248 aaKnown RBP12.96□□□□□ -0.33
PTPN2-215ENST00000592776 TMEM238C9JI98 176 aa12.94□□□□□ -0.34
PTPN2-215ENST00000592776 CRYGAP11844 174 aa12.94□□□□□ -0.34
PTPN2-215ENST00000592776 PRLHP81277 87 aa12.94□□□□□ -0.34
PTPN2-215ENST00000592776 NDUFA5Q16718 116 aa12.94□□□□□ -0.34
PTPN2-215ENST00000592776 TYMSOSQ8TAI1 123 aa12.94□□□□□ -0.34
PTPN2-215ENST00000592776 A0A0U1RRA0 63 aa12.92□□□□□ -0.34
PTPN2-215ENST00000592776 COX17Q14061 63 aa12.92□□□□□ -0.34
PTPN2-215ENST00000592776 KRTAP13-2Q52LG2 175 aa12.92□□□□□ -0.34
PTPN2-215ENST00000592776 TMEM126AQ9H061 195 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms