RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 C9orf129Q5T035 196 aaKnown RBP11.39□□□□□ -0.59
CCDC43-205ENST00000592333 RPL13AP40429 203 aaKnown RBP11.38□□□□□ -0.59
CCDC43-205ENST00000592333 CARHSP1Q9Y2V2 147 aaKnown RBP11.38□□□□□ -0.59
CCDC43-205ENST00000592333 KRTAP1-4P0C5Y4 121 aa11.37□□□□□ -0.59
CCDC43-205ENST00000592333 LORP23490 312 aaPredicted RBP11.37□□□□□ -0.59
CCDC43-205ENST00000592333 TIMM17AQ99595 171 aa11.37□□□□□ -0.59
CCDC43-205ENST00000592333 LINC01549A6NIU2 74 aa11.36□□□□□ -0.59
CCDC43-205ENST00000592333 NUPR1O60356 82 aa11.36□□□□□ -0.59
CCDC43-205ENST00000592333 RAB14P61106 215 aa11.36□□□□□ -0.59
CCDC43-205ENST00000592333 CXCL5P42830 114 aa11.35□□□□□ -0.59
CCDC43-205ENST00000592333 LBHQ53QV2 105 aaPredicted RBP11.35□□□□□ -0.59
CCDC43-205ENST00000592333 ALKBH7Q9BT30 221 aaPredicted RBP11.35□□□□□ -0.59
CCDC43-205ENST00000592333 CTDSP1Q9GZU7 261 aa11.35□□□□□ -0.59
CCDC43-205ENST00000592333 F8VRH5 84 aa11.34□□□□□ -0.59
CCDC43-205ENST00000592333 ZNF861PO60384 105 aa11.34□□□□□ -0.59
CCDC43-205ENST00000592333 TOMM7Q9P0U1 55 aa11.34□□□□□ -0.59
CCDC43-205ENST00000592333 TP73-AS1Q9UF72 201 aa11.34□□□□□ -0.59
CCDC43-205ENST00000592333 TOMM6Q96B49 74 aa11.33□□□□□ -0.6
CCDC43-205ENST00000592333 GEMIN7Q9H840 131 aaKnown RBP11.33□□□□□ -0.6
CCDC43-205ENST00000592333 ZC2HC1BQ5TFG8 222 aa11.32□□□□□ -0.6
CCDC43-205ENST00000592333 CDKN2A-AS1Q9UH64 79 aa11.32□□□□□ -0.6
CCDC43-205ENST00000592333 C22orf24Q9Y442 160 aa11.32□□□□□ -0.6
CCDC43-205ENST00000592333 TRAV9-1A0A075B6T8 112 aa11.31□□□□□ -0.6
CCDC43-205ENST00000592333 ERASQ7Z444 233 aa11.31□□□□□ -0.6
CCDC43-205ENST00000592333 PDZD11Q5EBL8 140 aa11.28□□□□□ -0.6
CCDC43-205ENST00000592333 TINCRA0A1B0GVN0 87 aa11.27□□□□□ -0.61
CCDC43-205ENST00000592333 MRPL55Q7Z7F7 128 aaKnown RBP11.27□□□□□ -0.61
CCDC43-205ENST00000592333 LINC00469Q8N7U9 141 aa11.27□□□□□ -0.61
CCDC43-205ENST00000592333 XAGE1AQ9HD64 81 aa11.27□□□□□ -0.61
CCDC43-205ENST00000592333 IGLV5-45A0A087WSX0 123 aa11.26□□□□□ -0.61
CCDC43-205ENST00000592333 LINC01546A6NGU7 62 aa11.26□□□□□ -0.61
CCDC43-205ENST00000592333 SCGB3A1Q96QR1 104 aa11.26□□□□□ -0.61
CCDC43-205ENST00000592333 RPL28P46779 137 aaKnown RBP11.25□□□□□ -0.61
CCDC43-205ENST00000592333 CLLU1Q5K131 121 aa11.25□□□□□ -0.61
CCDC43-205ENST00000592333 UQCC3Q6UW78 93 aa11.25□□□□□ -0.61
CCDC43-205ENST00000592333 SMIM1B2RUZ4 78 aa11.24□□□□□ -0.61
CCDC43-205ENST00000592333 LPAP08519 4548 aa11.24□□□□□ -0.61
CCDC43-205ENST00000592333 BCE1O60756 84 aa11.23□□□□□ -0.61
CCDC43-205ENST00000592333 COX19Q49B96 90 aa11.23□□□□□ -0.61
CCDC43-205ENST00000592333 COX7B2Q8TF08 81 aa11.23□□□□□ -0.61
CCDC43-205ENST00000592333 GNB1LQ9BYB4 327 aa11.23□□□□□ -0.61
CCDC43-205ENST00000592333 MRPL18Q9H0U6 180 aaKnown RBP11.22□□□□□ -0.61
CCDC43-205ENST00000592333 KIAA1644Q3SXP7 199 aa11.21□□□□□ -0.61
CCDC43-205ENST00000592333 CST9LQ9H4G1 147 aa11.21□□□□□ -0.61
CCDC43-205ENST00000592333 IGLV5-37A0A075B6J1 123 aa11.2□□□□□ -0.62
CCDC43-205ENST00000592333 S100PP25815 95 aa11.2□□□□□ -0.62
CCDC43-205ENST00000592333 TMEM218A2RU14 115 aa11.19□□□□□ -0.62
CCDC43-205ENST00000592333 PMVKQ15126 192 aa11.19□□□□□ -0.62
CCDC43-205ENST00000592333 LINC00167Q96N53 147 aa11.19□□□□□ -0.62
CCDC43-205ENST00000592333 ADCYAP1P18509 176 aa11.18□□□□□ -0.62
CCDC43-205ENST00000592333 PRR4Q16378 134 aa11.18□□□□□ -0.62
CCDC43-205ENST00000592333 H3BRM9 83 aa11.17□□□□□ -0.62
CCDC43-205ENST00000592333 CRYGAP11844 174 aa11.17□□□□□ -0.62
CCDC43-205ENST00000592333 SEC11CQ9BY50 192 aa11.17□□□□□ -0.62
CCDC43-205ENST00000592333 ATP5LO75964 103 aa11.15□□□□□ -0.62
CCDC43-205ENST00000592333 FA2HQ7L5A8 372 aa11.14□□□□□ -0.63
CCDC43-205ENST00000592333 NKAPP1Q8N9T2 125 aa11.14□□□□□ -0.63
CCDC43-205ENST00000592333 SMCO4Q9NRQ5 59 aa11.14□□□□□ -0.63
CCDC43-205ENST00000592333 RPL37AP8A6NKH3 93 aa11.13□□□□□ -0.63
CCDC43-205ENST00000592333 TYMSOSQ8TAI1 123 aa11.13□□□□□ -0.63
CCDC43-205ENST00000592333 A0A087X002 238 aa11.12□□□□□ -0.63
CCDC43-205ENST00000592333 SPINK8P0C7L1 97 aa11.12□□□□□ -0.63
CCDC43-205ENST00000592333 CTAG1AP78358 180 aa11.12□□□□□ -0.63
CCDC43-205ENST00000592333 KRTAP13-1Q8IUC0 172 aa11.12□□□□□ -0.63
CCDC43-205ENST00000592333 IGLV5-39A0A0G2JS06 123 aa11.11□□□□□ -0.63
CCDC43-205ENST00000592333 IGLC3P0DOY3 106 aa11.11□□□□□ -0.63
CCDC43-205ENST00000592333 RAB5BP61020 215 aa11.11□□□□□ -0.63
CCDC43-205ENST00000592333 COX17Q14061 63 aa11.11□□□□□ -0.63
CCDC43-205ENST00000592333 FAM229BQ4G0N7 80 aa11.11□□□□□ -0.63
CCDC43-205ENST00000592333 SFTA2Q6UW10 78 aa11.11□□□□□ -0.63
CCDC43-205ENST00000592333 UBE2AP49459 152 aa11.1□□□□□ -0.63
CCDC43-205ENST00000592333 FABP9Q0Z7S8 132 aa11.09□□□□□ -0.63
CCDC43-205ENST00000592333 GAGE10A6NGK3 116 aa11.08□□□□□ -0.64
CCDC43-205ENST00000592333 TSPAN13O95857 204 aa11.07□□□□□ -0.64
CCDC43-205ENST00000592333 RPL24P83731 157 aaKnown RBP11.07□□□□□ -0.64
CCDC43-205ENST00000592333 RHEBQ15382 184 aa11.07□□□□□ -0.64
CCDC43-205ENST00000592333 A0A0U1RQV1 116 aa11.06□□□□□ -0.64
CCDC43-205ENST00000592333 C10orf91Q5T1B1 145 aa11.06□□□□□ -0.64
CCDC43-205ENST00000592333 LINC00614P0C842 121 aa11.05□□□□□ -0.64
CCDC43-205ENST00000592333 ERG28Q9UKR5 140 aa11.05□□□□□ -0.64
CCDC43-205ENST00000592333 MUC2Q02817 5179 aa11.04□□□□□ -0.64
CCDC43-205ENST00000592333 A0A096LNJ9 63 aa11.04□□□□□ -0.64
CCDC43-205ENST00000592333 ZNF22P17026 224 aaPredicted RBP11.04□□□□□ -0.64
CCDC43-205ENST00000592333 PFN2P35080 140 aa11.04□□□□□ -0.64
CCDC43-205ENST00000592333 SND1-IT1Q9HBX3 110 aa11.04□□□□□ -0.64
CCDC43-205ENST00000592333 IGKV2-28A0A075B6P5 120 aa11.03□□□□□ -0.64
CCDC43-205ENST00000592333 IGKV2D-28P01615 120 aa11.03□□□□□ -0.64
CCDC43-205ENST00000592333 HBDP02042 147 aa11.03□□□□□ -0.64
CCDC43-205ENST00000592333 VPREB1P12018 145 aa11.03□□□□□ -0.64
CCDC43-205ENST00000592333 IFITM2Q01629 132 aa11.03□□□□□ -0.64
CCDC43-205ENST00000592333 KRTAP13-2Q52LG2 175 aa11.02□□□□□ -0.65
CCDC43-205ENST00000592333 TMEM126AQ9H061 195 aa11.02□□□□□ -0.65
CCDC43-205ENST00000592333 NDUFA6P56556 154 aa11.01□□□□□ -0.65
CCDC43-205ENST00000592333 C18orf32Q8TCD1 76 aa11.01□□□□□ -0.65
CCDC43-205ENST00000592333 RPS10P5Q9NQ39 176 aa11.01□□□□□ -0.65
CCDC43-205ENST00000592333 IGKV2D-26A0A0A0MRZ7 120 aa11□□□□□ -0.65
CCDC43-205ENST00000592333 LINC00304Q8N9R0 145 aa11□□□□□ -0.65
CCDC43-205ENST00000592333 ANAPC11Q9NYG5 84 aa11□□□□□ -0.65
CCDC43-205ENST00000592333 TRAPPC1Q9Y5R8 145 aa11□□□□□ -0.65
CCDC43-205ENST00000592333 FAM19A1Q7Z5A9 133 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms