RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 CARHSP1Q9Y2V2 147 aaKnown RBP12.99□□□□□ -0.33
DDX39A-215ENST00000590696 NUPR1O60356 82 aa12.98□□□□□ -0.33
DDX39A-215ENST00000590696 HERVK_113P63121 156 aa12.98□□□□□ -0.33
DDX39A-215ENST00000590696 PRR4Q16378 134 aa12.98□□□□□ -0.33
DDX39A-215ENST00000590696 LBHQ53QV2 105 aaPredicted RBP12.98□□□□□ -0.33
DDX39A-215ENST00000590696 SEC11AP67812 179 aa12.97□□□□□ -0.33
DDX39A-215ENST00000590696 PAPPA-AS1Q5QFB9 102 aa12.97□□□□□ -0.33
DDX39A-215ENST00000590696 F8VRH5 84 aa12.96□□□□□ -0.33
DDX39A-215ENST00000590696 CTDSP1Q9GZU7 261 aa12.96□□□□□ -0.33
DDX39A-215ENST00000590696 GEMIN7Q9H840 131 aaKnown RBP12.96□□□□□ -0.33
DDX39A-215ENST00000590696 G0S2P27469 103 aa12.94□□□□□ -0.34
DDX39A-215ENST00000590696 TOMM6Q96B49 74 aa12.94□□□□□ -0.34
DDX39A-215ENST00000590696 TIMM17AQ99595 171 aa12.94□□□□□ -0.34
DDX39A-215ENST00000590696 MRPL55Q7Z7F7 128 aaKnown RBP12.93□□□□□ -0.34
DDX39A-215ENST00000590696 TP73-AS1Q9UF72 201 aa12.92□□□□□ -0.34
DDX39A-215ENST00000590696 CXCL5P42830 114 aa12.91□□□□□ -0.34
DDX39A-215ENST00000590696 KIAA1644Q3SXP7 199 aa12.91□□□□□ -0.34
DDX39A-215ENST00000590696 ERASQ7Z444 233 aa12.9□□□□□ -0.34
DDX39A-215ENST00000590696 RPL28P46779 137 aaKnown RBP12.89□□□□□ -0.35
DDX39A-215ENST00000590696 RAB14P61106 215 aa12.89□□□□□ -0.35
DDX39A-215ENST00000590696 SCGB3A1Q96QR1 104 aa12.89□□□□□ -0.35
DDX39A-215ENST00000590696 SMIM1B2RUZ4 78 aa12.88□□□□□ -0.35
DDX39A-215ENST00000590696 BCE1O60756 84 aa12.88□□□□□ -0.35
DDX39A-215ENST00000590696 TSPAN13O95857 204 aa12.88□□□□□ -0.35
DDX39A-215ENST00000590696 RPL37AP8A6NKH3 93 aa12.87□□□□□ -0.35
DDX39A-215ENST00000590696 PDZD11Q5EBL8 140 aa12.87□□□□□ -0.35
DDX39A-215ENST00000590696 COX7B2Q8TF08 81 aa12.87□□□□□ -0.35
DDX39A-215ENST00000590696 LINC00167Q96N53 147 aa12.87□□□□□ -0.35
DDX39A-215ENST00000590696 TINCRA0A1B0GVN0 87 aa12.86□□□□□ -0.35
DDX39A-215ENST00000590696 ADCYAP1P18509 176 aa12.86□□□□□ -0.35
DDX39A-215ENST00000590696 A0A087X002 238 aa12.85□□□□□ -0.35
DDX39A-215ENST00000590696 MUC2Q02817 5179 aa12.84□□□□□ -0.35
DDX39A-215ENST00000590696 IGLV5-45A0A087WSX0 123 aa12.83□□□□□ -0.36
DDX39A-215ENST00000590696 GAGE10A6NGK3 116 aa12.83□□□□□ -0.36
DDX39A-215ENST00000590696 CRYGAP11844 174 aa12.83□□□□□ -0.36
DDX39A-215ENST00000590696 RAB5BP61020 215 aa12.83□□□□□ -0.36
DDX39A-215ENST00000590696 TYMSOSQ8TAI1 123 aa12.82□□□□□ -0.36
DDX39A-215ENST00000590696 SPINK8P0C7L1 97 aa12.81□□□□□ -0.36
DDX39A-215ENST00000590696 CST9LQ9H4G1 147 aa12.81□□□□□ -0.36
DDX39A-215ENST00000590696 LINC01549A6NIU2 74 aa12.8□□□□□ -0.36
DDX39A-215ENST00000590696 IGLV5-37A0A075B6J1 123 aa12.79□□□□□ -0.36
DDX39A-215ENST00000590696 TRAV9-1A0A075B6T8 112 aa12.79□□□□□ -0.36
DDX39A-215ENST00000590696 LINC01546A6NGU7 62 aa12.79□□□□□ -0.36
DDX39A-215ENST00000590696 ANAPC11Q9NYG5 84 aa12.79□□□□□ -0.36
DDX39A-215ENST00000590696 NKAPP1Q8N9T2 125 aa12.78□□□□□ -0.36
DDX39A-215ENST00000590696 PMVKQ15126 192 aa12.77□□□□□ -0.37
DDX39A-215ENST00000590696 CLLU1Q5K131 121 aa12.77□□□□□ -0.37
DDX39A-215ENST00000590696 GNB1LQ9BYB4 327 aa12.77□□□□□ -0.37
DDX39A-215ENST00000590696 UBE2AP49459 152 aa12.76□□□□□ -0.37
DDX39A-215ENST00000590696 KRTAP13-1Q8IUC0 172 aa12.76□□□□□ -0.37
DDX39A-215ENST00000590696 MRPL18Q9H0U6 180 aaKnown RBP12.75□□□□□ -0.37
DDX39A-215ENST00000590696 SCO1O75880 301 aa12.74□□□□□ -0.37
DDX39A-215ENST00000590696 KRTAP13-2Q52LG2 175 aa12.74□□□□□ -0.37
DDX39A-215ENST00000590696 IGKV2-28A0A075B6P5 120 aa12.73□□□□□ -0.37
DDX39A-215ENST00000590696 TMEM218A2RU14 115 aa12.73□□□□□ -0.37
DDX39A-215ENST00000590696 H3BRM9 83 aa12.73□□□□□ -0.37
DDX39A-215ENST00000590696 ATP5LO75964 103 aa12.73□□□□□ -0.37
DDX39A-215ENST00000590696 IGKV2D-28P01615 120 aa12.73□□□□□ -0.37
DDX39A-215ENST00000590696 S100PP25815 95 aa12.73□□□□□ -0.37
DDX39A-215ENST00000590696 FA2HQ7L5A8 372 aa12.73□□□□□ -0.37
DDX39A-215ENST00000590696 PFN2P35080 140 aa12.72□□□□□ -0.37
DDX39A-215ENST00000590696 SMCO4Q9NRQ5 59 aa12.72□□□□□ -0.37
DDX39A-215ENST00000590696 UQCC3Q6UW78 93 aa12.71□□□□□ -0.37
DDX39A-215ENST00000590696 A0A0U1RQV1 116 aa12.7□□□□□ -0.38
DDX39A-215ENST00000590696 FABP9Q0Z7S8 132 aa12.69□□□□□ -0.38
DDX39A-215ENST00000590696 FAM229BQ4G0N7 80 aa12.69□□□□□ -0.38
DDX39A-215ENST00000590696 IGLV5-39A0A0G2JS06 123 aa12.68□□□□□ -0.38
DDX39A-215ENST00000590696 IGLC3P0DOY3 106 aa12.68□□□□□ -0.38
DDX39A-215ENST00000590696 COX19Q49B96 90 aa12.68□□□□□ -0.38
DDX39A-215ENST00000590696 NDUFA6P56556 154 aa12.67□□□□□ -0.38
DDX39A-215ENST00000590696 RETNLBQ9BQ08 111 aa12.67□□□□□ -0.38
DDX39A-215ENST00000590696 SEC11CQ9BY50 192 aa12.67□□□□□ -0.38
DDX39A-215ENST00000590696 VPREB1P12018 145 aa12.66□□□□□ -0.38
DDX39A-215ENST00000590696 PRLHP81277 87 aa12.66□□□□□ -0.38
DDX39A-215ENST00000590696 LINC00304Q8N9R0 145 aa12.66□□□□□ -0.38
DDX39A-215ENST00000590696 SND1-IT1Q9HBX3 110 aa12.66□□□□□ -0.38
DDX39A-215ENST00000590696 ZNF22P17026 224 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-215ENST00000590696 FAM19A1Q7Z5A9 133 aa12.65□□□□□ -0.38
DDX39A-215ENST00000590696 TMEM126AQ9H061 195 aa12.65□□□□□ -0.38
DDX39A-215ENST00000590696 ERG28Q9UKR5 140 aa12.65□□□□□ -0.38
DDX39A-215ENST00000590696 IGKV2D-26A0A0A0MRZ7 120 aa12.64□□□□□ -0.39
DDX39A-215ENST00000590696 TMEM238C9JI98 176 aa12.64□□□□□ -0.39
DDX39A-215ENST00000590696 A0A096LNJ9 63 aa12.63□□□□□ -0.39
DDX39A-215ENST00000590696 ZNF625Q96I27 306 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-215ENST00000590696 RPL24P83731 157 aaKnown RBP12.62□□□□□ -0.39
DDX39A-215ENST00000590696 COX17Q14061 63 aa12.62□□□□□ -0.39
DDX39A-215ENST00000590696 M0R378 163 aa12.6□□□□□ -0.39
DDX39A-215ENST00000590696 Q8NDZ9 215 aa12.6□□□□□ -0.39
DDX39A-215ENST00000590696 URB1-AS1Q96HZ7 61 aa12.6□□□□□ -0.39
DDX39A-215ENST00000590696 LINC00614P0C842 121 aa12.59□□□□□ -0.39
DDX39A-215ENST00000590696 IFITM2Q01629 132 aa12.59□□□□□ -0.39
DDX39A-215ENST00000590696 PLEKHB2Q96CS7 222 aa12.58□□□□□ -0.4
DDX39A-215ENST00000590696 RPS10P5Q9NQ39 176 aa12.58□□□□□ -0.4
DDX39A-215ENST00000590696 C11orf86A6NJI1 115 aa12.57□□□□□ -0.4
DDX39A-215ENST00000590696 HBDP02042 147 aa12.57□□□□□ -0.4
DDX39A-215ENST00000590696 PMCHL1Q16048 86 aa12.57□□□□□ -0.4
DDX39A-215ENST00000590696 C18orf32Q8TCD1 76 aa12.57□□□□□ -0.4
DDX39A-215ENST00000590696 TMEM170BQ5T4T1 132 aa12.56□□□□□ -0.4
DDX39A-215ENST00000590696 BAGE3Q86Y29 109 aa12.56□□□□□ -0.4
DDX39A-215ENST00000590696 CBLN2Q8IUK8 224 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms