RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 CRYBA4P53673 196 aa10.35□□□□□ -0.75
RETREG3-208ENST00000589797 KPRPQ5T749 579 aaPredicted RBP10.35□□□□□ -0.75
RETREG3-208ENST00000589797 A0A0B4J2C4 111 aa10.34□□□□□ -0.75
RETREG3-208ENST00000589797 MIFP14174 115 aa10.34□□□□□ -0.75
RETREG3-208ENST00000589797 HAMPP81172 84 aa10.34□□□□□ -0.75
RETREG3-208ENST00000589797 AMELXQ99217 191 aa10.34□□□□□ -0.75
RETREG3-208ENST00000589797 HIVEP1P15822 2718 aa10.34□□□□□ -0.75
RETREG3-208ENST00000589797 TRBV10-2A0A0K0K1G8 114 aa10.34□□□□□ -0.75
RETREG3-208ENST00000589797 FHL3Q13643 280 aa10.34□□□□□ -0.75
RETREG3-208ENST00000589797 SPANXCQ9NY87 97 aa10.33□□□□□ -0.76
RETREG3-208ENST00000589797 KRTAP1-3Q8IUG1 177 aa10.32□□□□□ -0.76
RETREG3-208ENST00000589797 INAFM2P0DMQ5 153 aa10.31□□□□□ -0.76
RETREG3-208ENST00000589797 A0A0J9YWU9 116 aa10.31□□□□□ -0.76
RETREG3-208ENST00000589797 Q8N3U1 123 aa10.31□□□□□ -0.76
RETREG3-208ENST00000589797 Q6ZTC4 211 aa10.31□□□□□ -0.76
RETREG3-208ENST00000589797 UFSP1Q6NVU6 142 aa10.31□□□□□ -0.76
RETREG3-208ENST00000589797 IGKV3D-7A0A0C4DH55 119 aa10.3□□□□□ -0.76
RETREG3-208ENST00000589797 CELA1Q9UNI1 258 aa10.3□□□□□ -0.76
RETREG3-208ENST00000589797 C14orf132Q9NPU4 83 aa10.3□□□□□ -0.76
RETREG3-208ENST00000589797 MT-ATP8P03928 68 aa10.29□□□□□ -0.76
RETREG3-208ENST00000589797 IGKV2-24A0A0C4DH68 120 aa10.29□□□□□ -0.76
RETREG3-208ENST00000589797 OVOL2Q9BRP0 275 aa10.29□□□□□ -0.76
RETREG3-208ENST00000589797 ORMDL1Q9P0S3 153 aa10.29□□□□□ -0.76
RETREG3-208ENST00000589797 UNQ6190/PRO20217Q6UXQ8 127 aa10.29□□□□□ -0.76
RETREG3-208ENST00000589797 SHISA2Q6UWI4 295 aa10.28□□□□□ -0.76
RETREG3-208ENST00000589797 KIR2DL5BQ8NHK3 375 aa10.27□□□□□ -0.77
RETREG3-208ENST00000589797 LINC01546A6NGU7 62 aa10.27□□□□□ -0.77
RETREG3-208ENST00000589797 TMEM126AQ9H061 195 aa10.26□□□□□ -0.77
RETREG3-208ENST00000589797 H0YGX0 51 aa10.26□□□□□ -0.77
RETREG3-208ENST00000589797 C6orf99Q4VX62 202 aa10.26□□□□□ -0.77
RETREG3-208ENST00000589797 C6orf223Q8N319 242 aa10.26□□□□□ -0.77
RETREG3-208ENST00000589797 CR1P17927 2039 aa10.26□□□□□ -0.77
RETREG3-208ENST00000589797 IBA57-AS1B1ANH7 110 aa10.26□□□□□ -0.77
RETREG3-208ENST00000589797 CD164L2Q6UWJ8 174 aa10.26□□□□□ -0.77
RETREG3-208ENST00000589797 SPENQ96T58 3664 aaKnown RBP10.25□□□□□ -0.77
RETREG3-208ENST00000589797 SS18L2Q9UHA2 77 aa10.25□□□□□ -0.77
RETREG3-208ENST00000589797 TRBV30A0A0K0K1B3 111 aa10.25□□□□□ -0.77
RETREG3-208ENST00000589797 B5MCH6 92 aa10.24□□□□□ -0.77
RETREG3-208ENST00000589797 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.24□□□□□ -0.77
RETREG3-208ENST00000589797 H7C423 109 aa10.24□□□□□ -0.77
RETREG3-208ENST00000589797 SMIM11BQ8TCY0 68 aa10.24□□□□□ -0.77
RETREG3-208ENST00000589797 CYSRT1A8MQ03 144 aa10.23□□□□□ -0.77
RETREG3-208ENST00000589797 SPATA3Q8NHX4 192 aa10.23□□□□□ -0.77
RETREG3-208ENST00000589797 SPANXDQ9BXN6 97 aa10.23□□□□□ -0.77
RETREG3-208ENST00000589797 DSCR8Q96T75 97 aa10.23□□□□□ -0.77
RETREG3-208ENST00000589797 H3BT86 120 aa10.23□□□□□ -0.77
RETREG3-208ENST00000589797 UBE2BP63146 152 aa10.22□□□□□ -0.77
RETREG3-208ENST00000589797 KRTAP10-3P60369 221 aa10.22□□□□□ -0.77
RETREG3-208ENST00000589797 LELP1Q5T871 98 aa10.22□□□□□ -0.77
RETREG3-208ENST00000589797 WFDC10BQ8IUB3 73 aa10.21□□□□□ -0.77
RETREG3-208ENST00000589797 A8MTW9 85 aa10.21□□□□□ -0.78
RETREG3-208ENST00000589797 GHRHP01286 108 aa10.21□□□□□ -0.78
RETREG3-208ENST00000589797 CXCL5P42830 114 aa10.21□□□□□ -0.78
RETREG3-208ENST00000589797 IGKV2-28A0A075B6P5 120 aa10.21□□□□□ -0.78
RETREG3-208ENST00000589797 IGKV2D-28P01615 120 aa10.21□□□□□ -0.78
RETREG3-208ENST00000589797 UBL5Q9BZL1 73 aa10.21□□□□□ -0.78
RETREG3-208ENST00000589797 X6R8D5 127 aa10.2□□□□□ -0.78
RETREG3-208ENST00000589797 A0A087WZ39 114 aa10.2□□□□□ -0.78
RETREG3-208ENST00000589797 EIF4EBP3O60516 100 aaPredicted RBP10.2□□□□□ -0.78
RETREG3-208ENST00000589797 KRTAP1-1Q07627 177 aa10.2□□□□□ -0.78
RETREG3-208ENST00000589797 GIG44P09565 113 aaPredicted RBP10.19□□□□□ -0.78
RETREG3-208ENST00000589797 LST1O00453 97 aa10.18□□□□□ -0.78
RETREG3-208ENST00000589797 RNF183Q96D59 192 aa10.18□□□□□ -0.78
RETREG3-208ENST00000589797 RMI2Q96E14 147 aa10.18□□□□□ -0.78
RETREG3-208ENST00000589797 CSDC2Q9Y534 153 aaKnown RBP10.18□□□□□ -0.78
RETREG3-208ENST00000589797 ETDCA0A1B0GVM5 59 aa10.18□□□□□ -0.78
RETREG3-208ENST00000589797 KRTAP24-1Q3LI83 254 aa10.18□□□□□ -0.78
RETREG3-208ENST00000589797 TIMM17BO60830 172 aa10.18□□□□□ -0.78
RETREG3-208ENST00000589797 M0R2N4 97 aa10.17□□□□□ -0.78
RETREG3-208ENST00000589797 IGHV3OR16-9A0A0B4J2B5 98 aa10.17□□□□□ -0.78
RETREG3-208ENST00000589797 DIRC1Q969H9 104 aa10.17□□□□□ -0.78
RETREG3-208ENST00000589797 FAM236AA0A1B0GUQ0 79 aa10.16□□□□□ -0.78
RETREG3-208ENST00000589797 FAM236BA0A1B0GV22 79 aa10.16□□□□□ -0.78
RETREG3-208ENST00000589797 XGP55808 180 aa10.16□□□□□ -0.78
RETREG3-208ENST00000589797 SPATA25Q9BR10 227 aa10.16□□□□□ -0.78
RETREG3-208ENST00000589797 F8WEM9 126 aa10.15□□□□□ -0.78
RETREG3-208ENST00000589797 A0A096LNI7 61 aa10.15□□□□□ -0.78
RETREG3-208ENST00000589797 SOSTDC1Q6X4U4 206 aa10.15□□□□□ -0.78
RETREG3-208ENST00000589797 LINC00337Q8N6G1 96 aa10.14□□□□□ -0.79
RETREG3-208ENST00000589797 RPL37AP8A6NKH3 93 aa10.14□□□□□ -0.79
RETREG3-208ENST00000589797 SYCNQ0VAF6 134 aa10.14□□□□□ -0.79
RETREG3-208ENST00000589797 SMIM20Q8N5G0 67 aa10.14□□□□□ -0.79
RETREG3-208ENST00000589797 C19orf73Q9NVV2 129 aa10.14□□□□□ -0.79
RETREG3-208ENST00000589797 LYPD5Q6UWN5 251 aa10.13□□□□□ -0.79
RETREG3-208ENST00000589797 Q8IZM0 81 aa10.13□□□□□ -0.79
RETREG3-208ENST00000589797 Q6ZQY7 126 aa10.13□□□□□ -0.79
RETREG3-208ENST00000589797 FAM19A5Q7Z5A7 132 aaPredicted RBP10.13□□□□□ -0.79
RETREG3-208ENST00000589797 SDIM1Q6ZPB5 146 aa10.13□□□□□ -0.79
RETREG3-208ENST00000589797 hADV29S1A0JD25 119 aa10.12□□□□□ -0.79
RETREG3-208ENST00000589797 C9orf153Q5TBE3 101 aa10.12□□□□□ -0.79
RETREG3-208ENST00000589797 CSMD2Q7Z408 3487 aa10.12□□□□□ -0.79
RETREG3-208ENST00000589797 A0A087WYN8 130 aa10.12□□□□□ -0.79
RETREG3-208ENST00000589797 SMCPP49901 116 aaPredicted RBP10.12□□□□□ -0.79
RETREG3-208ENST00000589797 RBM3P98179 157 aaKnown RBP10.12□□□□□ -0.79
RETREG3-208ENST00000589797 CSNK1G2-AS1Q8NCQ2 148 aa10.12□□□□□ -0.79
RETREG3-208ENST00000589797 HIGD2AQ9BW72 106 aa10.11□□□□□ -0.79
RETREG3-208ENST00000589797 KMT2BQ9UMN6 2715 aaPredicted RBP10.11□□□□□ -0.79
RETREG3-208ENST00000589797 TRACP01848 142 aa10.11□□□□□ -0.79
RETREG3-208ENST00000589797 SCXQ7RTU7 201 aa10.11□□□□□ -0.79
RETREG3-208ENST00000589797 IGLV5-39A0A0G2JS06 123 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 1353.3 ms