RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 C10orf126Q8N4M7 172 aa16.78■□□□□ 0.28
RFX1-205ENST00000589239 ANKRD29Q8N6D5 301 aa16.78■□□□□ 0.28
RFX1-205ENST00000589239 IGKV3OR2-268A0A0C4DH90 116 aa16.78■□□□□ 0.28
RFX1-205ENST00000589239 KLK12Q9UKR0 248 aa16.78■□□□□ 0.28
RFX1-205ENST00000589239 VPS13DQ5THJ4 4388 aa16.77■□□□□ 0.28
RFX1-205ENST00000589239 CFC1BP0CG36 223 aa16.76■□□□□ 0.27
RFX1-205ENST00000589239 CFC1P0CG37 223 aa16.76■□□□□ 0.27
RFX1-205ENST00000589239 IGLV4-69A0A075B6H9 119 aa16.75■□□□□ 0.27
RFX1-205ENST00000589239 TRAV13-1A0A0B4J241 112 aa16.75■□□□□ 0.27
RFX1-205ENST00000589239 C11orf86A6NJI1 115 aa16.74■□□□□ 0.27
RFX1-205ENST00000589239 PRO1854Q9UHT4 67 aa16.73■□□□□ 0.27
RFX1-205ENST00000589239 REG3AQ06141 175 aa16.73■□□□□ 0.27
RFX1-205ENST00000589239 SCGB1C2P0DMR2 95 aa16.72■□□□□ 0.27
RFX1-205ENST00000589239 SS18L2Q9UHA2 77 aa16.71■□□□□ 0.27
RFX1-205ENST00000589239 SLC25A20O43772 301 aa16.7■□□□□ 0.26
RFX1-205ENST00000589239 ENHOQ6UWT2 76 aa16.7■□□□□ 0.26
RFX1-205ENST00000589239 UBE2WQ96B02 151 aa16.7■□□□□ 0.26
RFX1-205ENST00000589239 PRR34Q9NV39 138 aa16.7■□□□□ 0.26
RFX1-205ENST00000589239 A0A0J9YXV3 536 aa16.69■□□□□ 0.26
RFX1-205ENST00000589239 LINC00959A0A1B0GUT2 108 aa16.69■□□□□ 0.26
RFX1-205ENST00000589239 CRPP02741 224 aa16.67■□□□□ 0.26
RFX1-205ENST00000589239 TSPEAR-AS2P59090 65 aa16.67■□□□□ 0.26
RFX1-205ENST00000589239 IGLV10-54A0A075B6I4 117 aa16.66■□□□□ 0.26
RFX1-205ENST00000589239 LINC00242Q5T6M2 205 aa16.66■□□□□ 0.26
RFX1-205ENST00000589239 KRTAP1-5Q9BYS1 174 aa16.66■□□□□ 0.26
RFX1-205ENST00000589239 KMT2AQ03164 3969 aa16.65■□□□□ 0.26
RFX1-205ENST00000589239 C9JAW5 83 aa16.65■□□□□ 0.26
RFX1-205ENST00000589239 GAGE2BQ13066 116 aa16.65■□□□□ 0.26
RFX1-205ENST00000589239 GAGE2EQ4V326 116 aa16.65■□□□□ 0.26
RFX1-205ENST00000589239 GAGE2DQ9UEU5 116 aa16.65■□□□□ 0.26
RFX1-205ENST00000589239 SNCGO76070 127 aa16.64■□□□□ 0.25
RFX1-205ENST00000589239 LY6G6CO95867 125 aa16.64■□□□□ 0.25
RFX1-205ENST00000589239 COX6A2Q02221 97 aa16.64■□□□□ 0.25
RFX1-205ENST00000589239 LINC01600Q96MT4 127 aa16.64■□□□□ 0.25
RFX1-205ENST00000589239 IBA57-AS1B1ANH7 110 aa16.63■□□□□ 0.25
RFX1-205ENST00000589239 B5MCH6 92 aa16.63■□□□□ 0.25
RFX1-205ENST00000589239 NDUFV3P56181 108 aaKnown RBP16.63■□□□□ 0.25
RFX1-205ENST00000589239 SS18Q15532 418 aa16.63■□□□□ 0.25
RFX1-205ENST00000589239 Q6Q795 121 aa16.63■□□□□ 0.25
RFX1-205ENST00000589239 A0A0B4J2C4 111 aa16.63■□□□□ 0.25
RFX1-205ENST00000589239 J3QQQ9 107 aa16.63■□□□□ 0.25
RFX1-205ENST00000589239 XCL1P47992 114 aa16.63■□□□□ 0.25
RFX1-205ENST00000589239 TMEM170BQ5T4T1 132 aa16.63■□□□□ 0.25
RFX1-205ENST00000589239 LINC00476Q8WZB0 136 aa16.63■□□□□ 0.25
RFX1-205ENST00000589239 TINCRA0A1B0GVN0 87 aa16.62■□□□□ 0.25
RFX1-205ENST00000589239 FAM19A3Q7Z5A8 133 aa16.62■□□□□ 0.25
RFX1-205ENST00000589239 Q9HAA7 133 aa16.62■□□□□ 0.25
RFX1-205ENST00000589239 LGALS3P17931 250 aaKnown RBP16.61■□□□□ 0.25
RFX1-205ENST00000589239 MIAQ16674 131 aa16.61■□□□□ 0.25
RFX1-205ENST00000589239 A4D1N5 150 aa16.61■□□□□ 0.25
RFX1-205ENST00000589239 CHCHD10Q8WYQ3 142 aaPredicted RBP16.6■□□□□ 0.25
RFX1-205ENST00000589239 ALMS1Q8TCU4 4167 aa16.6■□□□□ 0.25
RFX1-205ENST00000589239 NBDYA0A0U1RRE5 68 aa16.59■□□□□ 0.25
RFX1-205ENST00000589239 HERVK_113P63121 156 aa16.59■□□□□ 0.25
RFX1-205ENST00000589239 ATXN8Q156A1 80 aa16.58■□□□□ 0.25
RFX1-205ENST00000589239 TRAV8-4A0A0B4J246 113 aa16.58■□□□□ 0.24
RFX1-205ENST00000589239 EIF4EBP3O60516 100 aaPredicted RBP16.58■□□□□ 0.24
RFX1-205ENST00000589239 ZNF22P17026 224 aaPredicted RBP16.58■□□□□ 0.24
RFX1-205ENST00000589239 RPL13AP40429 203 aaKnown RBP16.58■□□□□ 0.24
RFX1-205ENST00000589239 CDKN2A-AS1Q9UH64 79 aa16.58■□□□□ 0.24
RFX1-205ENST00000589239 IFITM1P13164 125 aa16.57■□□□□ 0.24
RFX1-205ENST00000589239 NTN5Q8WTR8 489 aaPredicted RBP16.57■□□□□ 0.24
RFX1-205ENST00000589239 TRAV8-3A0A0A6YYJ7 113 aa16.57■□□□□ 0.24
RFX1-205ENST00000589239 LEPROTO15243 131 aa16.57■□□□□ 0.24
RFX1-205ENST00000589239 TTC32Q5I0X7 151 aa16.57■□□□□ 0.24
RFX1-205ENST00000589239 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.56■□□□□ 0.24
RFX1-205ENST00000589239 IGHV3OR16-9A0A0B4J2B5 98 aa16.55■□□□□ 0.24
RFX1-205ENST00000589239 M0R2N4 97 aa16.55■□□□□ 0.24
RFX1-205ENST00000589239 LINC01620Q4KN68 170 aa16.55■□□□□ 0.24
RFX1-205ENST00000589239 IGKV2D-24A0A075B6R9 120 aa16.55■□□□□ 0.24
RFX1-205ENST00000589239 IGLV5-45A0A087WSX0 123 aa16.55■□□□□ 0.24
RFX1-205ENST00000589239 CD164L2Q6UWJ8 174 aa16.55■□□□□ 0.24
RFX1-205ENST00000589239 C1orf43Q9BWL3 253 aa16.55■□□□□ 0.24
RFX1-205ENST00000589239 DNAH10Q8IVF4 4471 aa16.54■□□□□ 0.24
RFX1-205ENST00000589239 C5orf38Q86SI9 138 aa16.54■□□□□ 0.24
RFX1-205ENST00000589239 TMEM223A0PJW6 202 aa16.53■□□□□ 0.24
RFX1-205ENST00000589239 TRBV10-2A0A0K0K1G8 114 aa16.52■□□□□ 0.24
RFX1-205ENST00000589239 KRTAP26-1Q6PEX3 210 aa16.52■□□□□ 0.23
RFX1-205ENST00000589239 MUSTN1Q8IVN3 82 aa16.52■□□□□ 0.23
RFX1-205ENST00000589239 CCDC179H3BU77 68 aa16.51■□□□□ 0.23
RFX1-205ENST00000589239 TRBV30A0A0K0K1B3 111 aa16.51■□□□□ 0.23
RFX1-205ENST00000589239 H7C2G1 150 aa16.5■□□□□ 0.23
RFX1-205ENST00000589239 Q1RN00 199 aa16.5■□□□□ 0.23
RFX1-205ENST00000589239 IGHV3-64A0A075B6Q5 118 aa16.49■□□□□ 0.23
RFX1-205ENST00000589239 A0A087WZ39 114 aa16.48■□□□□ 0.23
RFX1-205ENST00000589239 HYDINQ4G0P3 5121 aa16.48■□□□□ 0.23
RFX1-205ENST00000589239 TEX49A0A1B0GTD5 131 aa16.48■□□□□ 0.23
RFX1-205ENST00000589239 COX7A2LO14548 114 aa16.48■□□□□ 0.23
RFX1-205ENST00000589239 SACSQ9NZJ4 4579 aa16.47■□□□□ 0.23
RFX1-205ENST00000589239 DNAH6Q9C0G6 4158 aa16.47■□□□□ 0.23
RFX1-205ENST00000589239 DNAH2Q9P225 4427 aa16.47■□□□□ 0.23
RFX1-205ENST00000589239 Q6ZR54 194 aa16.46■□□□□ 0.23
RFX1-205ENST00000589239 RMI2Q96E14 147 aa16.46■□□□□ 0.23
RFX1-205ENST00000589239 SMIM1B2RUZ4 78 aa16.45■□□□□ 0.22
RFX1-205ENST00000589239 TRIAP1O43715 76 aa16.45■□□□□ 0.22
RFX1-205ENST00000589239 MALP21145 153 aa16.44■□□□□ 0.22
RFX1-205ENST00000589239 H3BT86 120 aa16.43■□□□□ 0.22
RFX1-205ENST00000589239 A0A0J9YXY3 114 aa16.42■□□□□ 0.22
RFX1-205ENST00000589239 IGHV1-58A0A0C4DH39 117 aa16.42■□□□□ 0.22
RFX1-205ENST00000589239 CFAP161Q6P656 301 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms