RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 FAM19A3Q7Z5A8 133 aa8.38□□□□□ -1.07
ERCC1-205ENST00000587888 MRPL55Q7Z7F7 128 aaKnown RBP8.38□□□□□ -1.07
ERCC1-205ENST00000587888 GEMIN7Q9H840 131 aaKnown RBP8.38□□□□□ -1.07
ERCC1-205ENST00000587888 RPL37AP8A6NKH3 93 aa8.37□□□□□ -1.07
ERCC1-205ENST00000587888 F8VRH5 84 aa8.37□□□□□ -1.07
ERCC1-205ENST00000587888 NPSP0C0P6 89 aa8.37□□□□□ -1.07
ERCC1-205ENST00000587888 RPL28P46779 137 aaKnown RBP8.37□□□□□ -1.07
ERCC1-205ENST00000587888 SEC11AP67812 179 aa8.37□□□□□ -1.07
ERCC1-205ENST00000587888 A0A087X002 238 aa8.36□□□□□ -1.07
ERCC1-205ENST00000587888 BCE1O60756 84 aa8.36□□□□□ -1.07
ERCC1-205ENST00000587888 MT-ND4LP03901 98 aa8.36□□□□□ -1.07
ERCC1-205ENST00000587888 PAPPA-AS1Q5QFB9 102 aa8.36□□□□□ -1.07
ERCC1-205ENST00000587888 TYMSOSQ8TAI1 123 aa8.36□□□□□ -1.07
ERCC1-205ENST00000587888 ANAPC16Q96DE5 110 aa8.36□□□□□ -1.07
ERCC1-205ENST00000587888 LINC00167Q96N53 147 aa8.36□□□□□ -1.07
ERCC1-205ENST00000587888 NXT2Q9NPJ8 142 aaKnown RBP8.36□□□□□ -1.07
ERCC1-205ENST00000587888 GAGE10A6NGK3 116 aa8.35□□□□□ -1.07
ERCC1-205ENST00000587888 K7EMI3 77 aa8.35□□□□□ -1.07
ERCC1-205ENST00000587888 CRYGAP11844 174 aa8.35□□□□□ -1.07
ERCC1-205ENST00000587888 ANAPC11Q9NYG5 84 aa8.35□□□□□ -1.07
ERCC1-205ENST00000587888 TP73-AS1Q9UF72 201 aa8.35□□□□□ -1.07
ERCC1-205ENST00000587888 G0S2P27469 103 aa8.34□□□□□ -1.07
ERCC1-205ENST00000587888 RAB5BP61020 215 aa8.33□□□□□ -1.08
ERCC1-205ENST00000587888 PNRC1Q12796 327 aaPredicted RBP8.33□□□□□ -1.08
ERCC1-205ENST00000587888 KIAA1644Q3SXP7 199 aa8.33□□□□□ -1.08
ERCC1-205ENST00000587888 TOMM6Q96B49 74 aa8.33□□□□□ -1.08
ERCC1-205ENST00000587888 SCGB3A1Q96QR1 104 aa8.33□□□□□ -1.08
ERCC1-205ENST00000587888 TIMM17AQ99595 171 aa8.33□□□□□ -1.08
ERCC1-205ENST00000587888 CXCL5P42830 114 aa8.32□□□□□ -1.08
ERCC1-205ENST00000587888 COX7B2Q8TF08 81 aa8.32□□□□□ -1.08
ERCC1-205ENST00000587888 A0A0U1RQV1 116 aa8.31□□□□□ -1.08
ERCC1-205ENST00000587888 SMIM1B2RUZ4 78 aa8.31□□□□□ -1.08
ERCC1-205ENST00000587888 PDZD11Q5EBL8 140 aa8.31□□□□□ -1.08
ERCC1-205ENST00000587888 ERASQ7Z444 233 aa8.31□□□□□ -1.08
ERCC1-205ENST00000587888 ADCYAP1P18509 176 aa8.3□□□□□ -1.08
ERCC1-205ENST00000587888 UBE2AP49459 152 aa8.3□□□□□ -1.08
ERCC1-205ENST00000587888 TINCRA0A1B0GVN0 87 aa8.29□□□□□ -1.08
ERCC1-205ENST00000587888 NKAPP1Q8N9T2 125 aa8.29□□□□□ -1.08
ERCC1-205ENST00000587888 SPINK8P0C7L1 97 aa8.28□□□□□ -1.08
ERCC1-205ENST00000587888 KRTAP13-2Q52LG2 175 aa8.28□□□□□ -1.08
ERCC1-205ENST00000587888 RETNLBQ9BQ08 111 aa8.28□□□□□ -1.08
ERCC1-205ENST00000587888 SCO1O75880 301 aa8.27□□□□□ -1.09
ERCC1-205ENST00000587888 CST9LQ9H4G1 147 aa8.27□□□□□ -1.09
ERCC1-205ENST00000587888 IGKV2-28A0A075B6P5 120 aa8.26□□□□□ -1.09
ERCC1-205ENST00000587888 IGLV5-45A0A087WSX0 123 aa8.26□□□□□ -1.09
ERCC1-205ENST00000587888 IGKV2D-28P01615 120 aa8.26□□□□□ -1.09
ERCC1-205ENST00000587888 RAB14P61106 215 aa8.26□□□□□ -1.09
ERCC1-205ENST00000587888 MUC2Q02817 5179 aa8.25□□□□□ -1.09
ERCC1-205ENST00000587888 IGLV5-37A0A075B6J1 123 aa8.25□□□□□ -1.09
ERCC1-205ENST00000587888 PFN2P35080 140 aa8.25□□□□□ -1.09
ERCC1-205ENST00000587888 KRTAP13-1Q8IUC0 172 aa8.25□□□□□ -1.09
ERCC1-205ENST00000587888 ATP5LO75964 103 aa8.24□□□□□ -1.09
ERCC1-205ENST00000587888 LINC00304Q8N9R0 145 aa8.24□□□□□ -1.09
ERCC1-205ENST00000587888 IGKV2D-26A0A0A0MRZ7 120 aa8.23□□□□□ -1.09
ERCC1-205ENST00000587888 PRLHP81277 87 aa8.23□□□□□ -1.09
ERCC1-205ENST00000587888 PMVKQ15126 192 aa8.23□□□□□ -1.09
ERCC1-205ENST00000587888 KRTAP9-2Q9BYQ4 174 aa8.23□□□□□ -1.09
ERCC1-205ENST00000587888 LINC01549A6NIU2 74 aa8.22□□□□□ -1.09
ERCC1-205ENST00000587888 H3BRM9 83 aa8.22□□□□□ -1.09
ERCC1-205ENST00000587888 FAM229BQ4G0N7 80 aa8.22□□□□□ -1.09
ERCC1-205ENST00000587888 FAM19A1Q7Z5A9 133 aa8.22□□□□□ -1.09
ERCC1-205ENST00000587888 MRPL18Q9H0U6 180 aaKnown RBP8.22□□□□□ -1.09
ERCC1-205ENST00000587888 LINC01546A6NGU7 62 aa8.21□□□□□ -1.1
ERCC1-205ENST00000587888 NDUFA6P56556 154 aa8.21□□□□□ -1.1
ERCC1-205ENST00000587888 CDIP1Q9H305 208 aa8.21□□□□□ -1.1
ERCC1-205ENST00000587888 TMEM238C9JI98 176 aa8.2□□□□□ -1.1
ERCC1-205ENST00000587888 FA2HQ7L5A8 372 aa8.2□□□□□ -1.1
ERCC1-205ENST00000587888 IGLV7-46A0A075B6I9 117 aa8.19□□□□□ -1.1
ERCC1-205ENST00000587888 ZNF625Q96I27 306 aaPredicted RBP8.19□□□□□ -1.1
ERCC1-205ENST00000587888 GNB1LQ9BYB4 327 aa8.19□□□□□ -1.1
ERCC1-205ENST00000587888 TMEM126AQ9H061 195 aa8.19□□□□□ -1.1
ERCC1-205ENST00000587888 SND1-IT1Q9HBX3 110 aa8.19□□□□□ -1.1
ERCC1-205ENST00000587888 SMCO4Q9NRQ5 59 aa8.19□□□□□ -1.1
ERCC1-205ENST00000587888 TRAV9-1A0A075B6T8 112 aa8.18□□□□□ -1.1
ERCC1-205ENST00000587888 VPREB1P12018 145 aa8.18□□□□□ -1.1
ERCC1-205ENST00000587888 S100PP25815 95 aa8.18□□□□□ -1.1
ERCC1-205ENST00000587888 LCE2AQ5TA79 106 aaPredicted RBP8.18□□□□□ -1.1
ERCC1-205ENST00000587888 RPL24P83731 157 aaKnown RBP8.17□□□□□ -1.1
ERCC1-205ENST00000587888 FABP9Q0Z7S8 132 aa8.17□□□□□ -1.1
ERCC1-205ENST00000587888 ERG28Q9UKR5 140 aa8.17□□□□□ -1.1
ERCC1-205ENST00000587888 IGLV5-39A0A0G2JS06 123 aa8.16□□□□□ -1.1
ERCC1-205ENST00000587888 M0R378 163 aa8.16□□□□□ -1.1
ERCC1-205ENST00000587888 IGLC3P0DOY3 106 aa8.16□□□□□ -1.1
ERCC1-205ENST00000587888 CBLN2Q8IUK8 224 aa8.16□□□□□ -1.1
ERCC1-205ENST00000587888 PLEKHB2Q96CS7 222 aa8.16□□□□□ -1.1
ERCC1-205ENST00000587888 TMEM218A2RU14 115 aa8.15□□□□□ -1.1
ERCC1-205ENST00000587888 ZNF22P17026 224 aaPredicted RBP8.15□□□□□ -1.1
ERCC1-205ENST00000587888 TPRXLQ17RH7 258 aa8.15□□□□□ -1.1
ERCC1-205ENST00000587888 C3orf22Q8N5N4 141 aa8.15□□□□□ -1.1
ERCC1-205ENST00000587888 COX17Q14061 63 aa8.14□□□□□ -1.11
ERCC1-205ENST00000587888 CLLU1Q5K131 121 aa8.14□□□□□ -1.11
ERCC1-205ENST00000587888 Q8NDZ9 215 aa8.14□□□□□ -1.11
ERCC1-205ENST00000587888 HIGD2AQ9BW72 106 aa8.13□□□□□ -1.11
ERCC1-205ENST00000587888 PPDPFQ9H3Y8 114 aa8.13□□□□□ -1.11
ERCC1-205ENST00000587888 PMCHL1Q16048 86 aa8.12□□□□□ -1.11
ERCC1-205ENST00000587888 COX19Q49B96 90 aa8.12□□□□□ -1.11
ERCC1-205ENST00000587888 TMEM170BQ5T4T1 132 aa8.12□□□□□ -1.11
ERCC1-205ENST00000587888 UQCC3Q6UW78 93 aa8.12□□□□□ -1.11
ERCC1-205ENST00000587888 A0A096LNJ9 63 aa8.11□□□□□ -1.11
ERCC1-205ENST00000587888 LINC00158P58513 81 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms