RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 REG3GQ6UW15 175 aa10.92□□□□□ -0.66
TPM4-206ENST00000587201 FA2HQ7L5A8 372 aa10.92□□□□□ -0.66
TPM4-206ENST00000587201 FAM19A5Q7Z5A7 132 aaPredicted RBP10.92□□□□□ -0.66
TPM4-206ENST00000587201 Q8IZM0 81 aa10.92□□□□□ -0.66
TPM4-206ENST00000587201 SMCO4Q9NRQ5 59 aa10.92□□□□□ -0.66
TPM4-206ENST00000587201 PLA2G2DQ9UNK4 145 aa10.92□□□□□ -0.66
TPM4-206ENST00000587201 NDUFC2-KCTD14E9PQ53 114 aa10.91□□□□□ -0.66
TPM4-206ENST00000587201 C1orf137Q5JT78 98 aa10.91□□□□□ -0.66
TPM4-206ENST00000587201 LINC01600Q96MT4 127 aa10.91□□□□□ -0.66
TPM4-206ENST00000587201 HMCN2Q8NDA2 5059 aa10.9□□□□□ -0.66
TPM4-206ENST00000587201 APOC3P02656 99 aa10.89□□□□□ -0.67
TPM4-206ENST00000587201 LINC00469Q8N7U9 141 aa10.89□□□□□ -0.67
TPM4-206ENST00000587201 TNXBP22105 4242 aa10.89□□□□□ -0.67
TPM4-206ENST00000587201 TINCRA0A1B0GVN0 87 aa10.88□□□□□ -0.67
TPM4-206ENST00000587201 TRAPPC1Q9Y5R8 145 aa10.88□□□□□ -0.67
TPM4-206ENST00000587201 C9orf129Q5T035 196 aaKnown RBP10.87□□□□□ -0.67
TPM4-206ENST00000587201 CST9LQ9H4G1 147 aa10.87□□□□□ -0.67
TPM4-206ENST00000587201 M0QXV9 152 aa10.86□□□□□ -0.67
TPM4-206ENST00000587201 PMVKQ15126 192 aa10.86□□□□□ -0.67
TPM4-206ENST00000587201 NDUFA5Q16718 116 aa10.86□□□□□ -0.67
TPM4-206ENST00000587201 SMIM1B2RUZ4 78 aa10.85□□□□□ -0.67
TPM4-206ENST00000587201 F8VRH5 84 aa10.85□□□□□ -0.67
TPM4-206ENST00000587201 SNAPINO95295 136 aa10.85□□□□□ -0.67
TPM4-206ENST00000587201 CXCL5P42830 114 aa10.85□□□□□ -0.67
TPM4-206ENST00000587201 UBE2BP63146 152 aa10.85□□□□□ -0.67
TPM4-206ENST00000587201 KRTAP7-1Q8IUC3 87 aa10.85□□□□□ -0.67
TPM4-206ENST00000587201 SVBPQ8N300 66 aa10.85□□□□□ -0.67
TPM4-206ENST00000587201 PDZD11Q5EBL8 140 aa10.84□□□□□ -0.67
TPM4-206ENST00000587201 KRTAP11-1Q8IUC1 163 aa10.84□□□□□ -0.67
TPM4-206ENST00000587201 IGLV5-45A0A087WSX0 123 aa10.83□□□□□ -0.68
TPM4-206ENST00000587201 IGLV7-43P04211 117 aa10.83□□□□□ -0.68
TPM4-206ENST00000587201 C18orf32Q8TCD1 76 aa10.83□□□□□ -0.68
TPM4-206ENST00000587201 COX7B2Q8TF08 81 aa10.83□□□□□ -0.68
TPM4-206ENST00000587201 LINC00614P0C842 121 aa10.82□□□□□ -0.68
TPM4-206ENST00000587201 SPINK8P0C7L1 97 aa10.81□□□□□ -0.68
TPM4-206ENST00000587201 NDUFA6P56556 154 aa10.81□□□□□ -0.68
TPM4-206ENST00000587201 KRTAP10-8P60410 259 aa10.81□□□□□ -0.68
TPM4-206ENST00000587201 URB1-AS1Q96HZ7 61 aa10.81□□□□□ -0.68
TPM4-206ENST00000587201 XAGE1AQ9HD64 81 aa10.81□□□□□ -0.68
TPM4-206ENST00000587201 A0A096LNJ9 63 aa10.8□□□□□ -0.68
TPM4-206ENST00000587201 H3BRM9 83 aa10.79□□□□□ -0.68
TPM4-206ENST00000587201 HBDP02042 147 aa10.79□□□□□ -0.68
TPM4-206ENST00000587201 PMCHL1Q16048 86 aa10.79□□□□□ -0.68
TPM4-206ENST00000587201 DIRC1Q969H9 104 aa10.79□□□□□ -0.68
TPM4-206ENST00000587201 RAB5BP61020 215 aa10.78□□□□□ -0.68
TPM4-206ENST00000587201 ODF1Q14990 250 aa10.78□□□□□ -0.68
TPM4-206ENST00000587201 SLC7A5P1Q8MH63 180 aa10.78□□□□□ -0.68
TPM4-206ENST00000587201 C22orf24Q9Y442 160 aa10.78□□□□□ -0.68
TPM4-206ENST00000587201 IGLC3P0DOY3 106 aa10.77□□□□□ -0.69
TPM4-206ENST00000587201 LBHQ53QV2 105 aaPredicted RBP10.76□□□□□ -0.69
TPM4-206ENST00000587201 H0Y9J4 135 aa10.75□□□□□ -0.69
TPM4-206ENST00000587201 ATP5LO75964 103 aa10.74□□□□□ -0.69
TPM4-206ENST00000587201 ZNF22P17026 224 aaPredicted RBP10.73□□□□□ -0.69
TPM4-206ENST00000587201 BAGE3Q86Y29 109 aa10.73□□□□□ -0.69
TPM4-206ENST00000587201 YPEL4Q96NS1 127 aa10.73□□□□□ -0.69
TPM4-206ENST00000587201 MRPL55Q7Z7F7 128 aaKnown RBP10.72□□□□□ -0.69
TPM4-206ENST00000587201 TP73-AS1Q9UF72 201 aa10.72□□□□□ -0.69
TPM4-206ENST00000587201 IGLV5-39A0A0G2JS06 123 aa10.71□□□□□ -0.69
TPM4-206ENST00000587201 NUPR1O60356 82 aa10.71□□□□□ -0.69
TPM4-206ENST00000587201 C11orf86A6NJI1 115 aa10.69□□□□□ -0.7
TPM4-206ENST00000587201 TMEM170BQ5T4T1 132 aa10.69□□□□□ -0.7
TPM4-206ENST00000587201 PRR26Q8N8Z3 221 aa10.69□□□□□ -0.7
TPM4-206ENST00000587201 CHCHD1Q96BP2 118 aaKnown RBP10.69□□□□□ -0.7
TPM4-206ENST00000587201 ZNF861PO60384 105 aa10.68□□□□□ -0.7
TPM4-206ENST00000587201 PFN2P35080 140 aa10.68□□□□□ -0.7
TPM4-206ENST00000587201 CBLN2Q8IUK8 224 aa10.68□□□□□ -0.7
TPM4-206ENST00000587201 CHTOPQ9Y3Y2 248 aaKnown RBP10.68□□□□□ -0.7
TPM4-206ENST00000587201 UBR4Q5T4S7 5183 aa10.68□□□□□ -0.7
TPM4-206ENST00000587201 LINC00167Q96N53 147 aa10.67□□□□□ -0.7
TPM4-206ENST00000587201 GAGE10A6NGK3 116 aa10.66□□□□□ -0.7
TPM4-206ENST00000587201 RPL37AP8A6NKH3 93 aa10.66□□□□□ -0.7
TPM4-206ENST00000587201 NKAPP1Q8N9T2 125 aa10.66□□□□□ -0.7
TPM4-206ENST00000587201 KRTAP1-4P0C5Y4 121 aa10.65□□□□□ -0.7
TPM4-206ENST00000587201 IFI27L1Q96BM0 104 aa10.65□□□□□ -0.7
TPM4-206ENST00000587201 ERG28Q9UKR5 140 aa10.65□□□□□ -0.7
TPM4-206ENST00000587201 IGLV1-50A0A075B6I6 118 aa10.64□□□□□ -0.71
TPM4-206ENST00000587201 IGLV5-37A0A075B6J1 123 aa10.64□□□□□ -0.71
TPM4-206ENST00000587201 ZNF625Q96I27 306 aaPredicted RBP10.64□□□□□ -0.71
TPM4-206ENST00000587201 TRAV12-1A0A0B4J245 112 aa10.63□□□□□ -0.71
TPM4-206ENST00000587201 BCE1O60756 84 aa10.63□□□□□ -0.71
TPM4-206ENST00000587201 HSBP1O75506 76 aa10.63□□□□□ -0.71
TPM4-206ENST00000587201 RPL28P46779 137 aaKnown RBP10.62□□□□□ -0.71
TPM4-206ENST00000587201 COX17Q14061 63 aa10.62□□□□□ -0.71
TPM4-206ENST00000587201 SFTA2Q6UW10 78 aa10.62□□□□□ -0.71
TPM4-206ENST00000587201 TRGC2P03986 189 aa10.61□□□□□ -0.71
TPM4-206ENST00000587201 FAM19A2Q8N3H0 131 aa10.61□□□□□ -0.71
TPM4-206ENST00000587201 SND1-IT1Q9HBX3 110 aa10.61□□□□□ -0.71
TPM4-206ENST00000587201 TMEM223A0PJW6 202 aa10.6□□□□□ -0.71
TPM4-206ENST00000587201 SCO1O75880 301 aa10.59□□□□□ -0.71
TPM4-206ENST00000587201 LRP2P98164 4655 aa10.58□□□□□ -0.72
TPM4-206ENST00000587201 IGKV2-28A0A075B6P5 120 aa10.58□□□□□ -0.72
TPM4-206ENST00000587201 IGKV2D-28P01615 120 aa10.58□□□□□ -0.72
TPM4-206ENST00000587201 RPL13AP40429 203 aaKnown RBP10.58□□□□□ -0.72
TPM4-206ENST00000587201 RPL24P83731 157 aaKnown RBP10.58□□□□□ -0.72
TPM4-206ENST00000587201 H0Y8G0 127 aa10.57□□□□□ -0.72
TPM4-206ENST00000587201 VPREB1P12018 145 aa10.57□□□□□ -0.72
TPM4-206ENST00000587201 UBE2AP49459 152 aa10.57□□□□□ -0.72
TPM4-206ENST00000587201 LINC00158P58513 81 aa10.56□□□□□ -0.72
TPM4-206ENST00000587201 A0A0U1RRA0 63 aa10.55□□□□□ -0.72
TPM4-206ENST00000587201 SERF1AO75920 110 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms