RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 IGHV3-33P01772 117 aa12.62□□□□□ -0.39
RETREG3-205ENST00000586870 MEIG1Q5JSS6 88 aa12.62□□□□□ -0.39
RETREG3-205ENST00000586870 CSMD3Q7Z407 3707 aa12.61□□□□□ -0.39
RETREG3-205ENST00000586870 EIF4EBP3O60516 100 aaPredicted RBP12.61□□□□□ -0.39
RETREG3-205ENST00000586870 LYPD5Q6UWN5 251 aa12.61□□□□□ -0.39
RETREG3-205ENST00000586870 LINC00269Q8N2A0 174 aa12.61□□□□□ -0.39
RETREG3-205ENST00000586870 C15orf53Q8NAA6 179 aa12.61□□□□□ -0.39
RETREG3-205ENST00000586870 ERG28Q9UKR5 140 aa12.61□□□□□ -0.39
RETREG3-205ENST00000586870 ANGP03950 147 aaKnown RBP12.6□□□□□ -0.39
RETREG3-205ENST00000586870 XCL1P47992 114 aa12.6□□□□□ -0.39
RETREG3-205ENST00000586870 SFTA2Q6UW10 78 aa12.6□□□□□ -0.39
RETREG3-205ENST00000586870 LINC00476Q8WZB0 136 aa12.6□□□□□ -0.39
RETREG3-205ENST00000586870 PPDPFQ9H3Y8 114 aa12.6□□□□□ -0.39
RETREG3-205ENST00000586870 TOMM7Q9P0U1 55 aa12.6□□□□□ -0.39
RETREG3-205ENST00000586870 REG3AQ06141 175 aa12.59□□□□□ -0.39
RETREG3-205ENST00000586870 LINC00308Q8TCZ7 52 aa12.59□□□□□ -0.39
RETREG3-205ENST00000586870 CLPSL2Q6UWE3 100 aa12.59□□□□□ -0.39
RETREG3-205ENST00000586870 CD164L2Q6UWJ8 174 aa12.59□□□□□ -0.39
RETREG3-205ENST00000586870 DYNC2H1Q8NCM8 4307 aaKnown RBP12.58□□□□□ -0.4
RETREG3-205ENST00000586870 LOC107984156A0A0G2JMH3 177 aa12.58□□□□□ -0.4
RETREG3-205ENST00000586870 NPC2P61916 151 aa12.58□□□□□ -0.4
RETREG3-205ENST00000586870 ARL17AQ8IVW1 177 aa12.58□□□□□ -0.4
RETREG3-205ENST00000586870 TENM2Q9NT68 2774 aa12.57□□□□□ -0.4
RETREG3-205ENST00000586870 UBE2DNLQ8IWF7 75 aa12.57□□□□□ -0.4
RETREG3-205ENST00000586870 DAND5Q8N907 189 aa12.57□□□□□ -0.4
RETREG3-205ENST00000586870 CHCHD10Q8WYQ3 142 aaPredicted RBP12.56□□□□□ -0.4
RETREG3-205ENST00000586870 Q8N3U1 123 aa12.55□□□□□ -0.4
RETREG3-205ENST00000586870 TRBV20-1A0A075B6N2 111 aa12.55□□□□□ -0.4
RETREG3-205ENST00000586870 A0A0U1RRA0 63 aa12.55□□□□□ -0.4
RETREG3-205ENST00000586870 F8W1H4 67 aa12.55□□□□□ -0.4
RETREG3-205ENST00000586870 Q8IZM0 81 aa12.55□□□□□ -0.4
RETREG3-205ENST00000586870 RYR2Q92736 4967 aa12.55□□□□□ -0.4
RETREG3-205ENST00000586870 IBA57-AS1B1ANH7 110 aa12.54□□□□□ -0.4
RETREG3-205ENST00000586870 H3BMG7 143 aa12.54□□□□□ -0.4
RETREG3-205ENST00000586870 COX7A2LO14548 114 aa12.54□□□□□ -0.4
RETREG3-205ENST00000586870 C6orf226Q5I0X4 101 aa12.54□□□□□ -0.4
RETREG3-205ENST00000586870 PSMB2P49721 201 aa12.53□□□□□ -0.4
RETREG3-205ENST00000586870 PRR34Q9NV39 138 aa12.53□□□□□ -0.4
RETREG3-205ENST00000586870 SCGB1C2P0DMR2 95 aa12.52□□□□□ -0.4
RETREG3-205ENST00000586870 Q1RN00 199 aa12.52□□□□□ -0.4
RETREG3-205ENST00000586870 LYSTQ99698 3801 aa12.52□□□□□ -0.41
RETREG3-205ENST00000586870 SACSQ9NZJ4 4579 aa12.52□□□□□ -0.41
RETREG3-205ENST00000586870 H7C2G1 150 aa12.51□□□□□ -0.41
RETREG3-205ENST00000586870 CCL18P55774 89 aa12.51□□□□□ -0.41
RETREG3-205ENST00000586870 SOSTDC1Q6X4U4 206 aa12.51□□□□□ -0.41
RETREG3-205ENST00000586870 TRBV30A0A0K0K1B3 111 aa12.51□□□□□ -0.41
RETREG3-205ENST00000586870 FOXI1Q12951 378 aa12.5□□□□□ -0.41
RETREG3-205ENST00000586870 KLK12Q9UKR0 248 aa12.5□□□□□ -0.41
RETREG3-205ENST00000586870 IGLV10-54A0A075B6I4 117 aa12.49□□□□□ -0.41
RETREG3-205ENST00000586870 MALP21145 153 aa12.49□□□□□ -0.41
RETREG3-205ENST00000586870 CXCL5P42830 114 aa12.49□□□□□ -0.41
RETREG3-205ENST00000586870 LINC00158P58513 81 aa12.49□□□□□ -0.41
RETREG3-205ENST00000586870 OCIAD2Q56VL3 154 aa12.49□□□□□ -0.41
RETREG3-205ENST00000586870 MIR7-3HGQ8N6C7 128 aa12.49□□□□□ -0.41
RETREG3-205ENST00000586870 PLECQ15149 4684 aaKnown RBP12.48□□□□□ -0.41
RETREG3-205ENST00000586870 TCL1BO95988 128 aa12.48□□□□□ -0.41
RETREG3-205ENST00000586870 PRO0461Q9UI25 63 aa12.48□□□□□ -0.41
RETREG3-205ENST00000586870 KIAA0087Q14695 138 aa12.48□□□□□ -0.41
RETREG3-205ENST00000586870 ENHOQ6UWT2 76 aa12.48□□□□□ -0.41
RETREG3-205ENST00000586870 TRAV8-4A0A0B4J246 113 aa12.47□□□□□ -0.41
RETREG3-205ENST00000586870 GAGE12HA6NDE8 117 aa12.47□□□□□ -0.41
RETREG3-205ENST00000586870 RPL13AP40429 203 aaKnown RBP12.47□□□□□ -0.41
RETREG3-205ENST00000586870 CFAP161Q6P656 301 aa12.47□□□□□ -0.41
RETREG3-205ENST00000586870 CRPP02741 224 aa12.46□□□□□ -0.41
RETREG3-205ENST00000586870 CKS1BP61024 79 aa12.46□□□□□ -0.41
RETREG3-205ENST00000586870 ESRGQ1W209 222 aa12.46□□□□□ -0.41
RETREG3-205ENST00000586870 COX6CP09669 75 aa12.45□□□□□ -0.42
RETREG3-205ENST00000586870 WFDC2Q14508 124 aa12.45□□□□□ -0.42
RETREG3-205ENST00000586870 WFDC10BQ8IUB3 73 aa12.45□□□□□ -0.42
RETREG3-205ENST00000586870 K7ERU9 68 aa12.44□□□□□ -0.42
RETREG3-205ENST00000586870 TRIAP1O43715 76 aa12.44□□□□□ -0.42
RETREG3-205ENST00000586870 PFN2P35080 140 aa12.43□□□□□ -0.42
RETREG3-205ENST00000586870 UBE2WQ96B02 151 aa12.43□□□□□ -0.42
RETREG3-205ENST00000586870 LINC00588Q9Y4M8 146 aa12.43□□□□□ -0.42
RETREG3-205ENST00000586870 ATXN8Q156A1 80 aa12.42□□□□□ -0.42
RETREG3-205ENST00000586870 C2orf82Q6UX34 121 aa12.42□□□□□ -0.42
RETREG3-205ENST00000586870 SND1-IT1Q9HBX3 110 aa12.42□□□□□ -0.42
RETREG3-205ENST00000586870 COX17Q14061 63 aa12.41□□□□□ -0.42
RETREG3-205ENST00000586870 TRAV13-2A0A0B4J235 113 aa12.4□□□□□ -0.42
RETREG3-205ENST00000586870 ALMS1Q8TCU4 4167 aa12.4□□□□□ -0.42
RETREG3-205ENST00000586870 LINC01556Q5JQF7 62 aa12.4□□□□□ -0.42
RETREG3-205ENST00000586870 DNAH1Q9P2D7 4330 aa12.4□□□□□ -0.43
RETREG3-205ENST00000586870 HYDINQ4G0P3 5121 aa12.39□□□□□ -0.43
RETREG3-205ENST00000586870 M0R2N4 97 aa12.39□□□□□ -0.43
RETREG3-205ENST00000586870 SMCPP49901 116 aaPredicted RBP12.39□□□□□ -0.43
RETREG3-205ENST00000586870 SPAG11BQ08648 103 aa12.39□□□□□ -0.43
RETREG3-205ENST00000586870 MTURNQ8N3F0 131 aa12.39□□□□□ -0.43
RETREG3-205ENST00000586870 ETDBQ3ZM63 59 aa12.37□□□□□ -0.43
RETREG3-205ENST00000586870 M0QXV9 152 aa12.36□□□□□ -0.43
RETREG3-205ENST00000586870 LINC01620Q4KN68 170 aa12.36□□□□□ -0.43
RETREG3-205ENST00000586870 IGKV2-28A0A075B6P5 120 aa12.35□□□□□ -0.43
RETREG3-205ENST00000586870 IGKV2D-28P01615 120 aa12.35□□□□□ -0.43
RETREG3-205ENST00000586870 KRTAP26-1Q6PEX3 210 aa12.35□□□□□ -0.43
RETREG3-205ENST00000586870 C9JAW5 83 aa12.34□□□□□ -0.43
RETREG3-205ENST00000586870 UPK3BQ9BT76 320 aa12.34□□□□□ -0.43
RETREG3-205ENST00000586870 DNAH10OSP0CZ25 163 aa12.33□□□□□ -0.43
RETREG3-205ENST00000586870 LINC00337Q8N6G1 96 aa12.33□□□□□ -0.43
RETREG3-205ENST00000586870 LST1O00453 97 aa12.33□□□□□ -0.44
RETREG3-205ENST00000586870 SLC25A20O43772 301 aa12.33□□□□□ -0.44
RETREG3-205ENST00000586870 LINC01600Q96MT4 127 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms