RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 PDZD2O15018 2839 aa7.95□□□□□ -1.14
TOP3A-217ENST00000584582 SMCPP49901 116 aaPredicted RBP7.95□□□□□ -1.14
TOP3A-217ENST00000584582 CRYBA4P53673 196 aa7.94□□□□□ -1.14
TOP3A-217ENST00000584582 GAGE2BQ13066 116 aa7.94□□□□□ -1.14
TOP3A-217ENST00000584582 GAGE2EQ4V326 116 aa7.94□□□□□ -1.14
TOP3A-217ENST00000584582 XAGE1AQ9HD64 81 aa7.94□□□□□ -1.14
TOP3A-217ENST00000584582 GAGE2DQ9UEU5 116 aa7.94□□□□□ -1.14
TOP3A-217ENST00000584582 IGKV2D-24A0A075B6R9 120 aa7.94□□□□□ -1.14
TOP3A-217ENST00000584582 LECT2O14960 151 aa7.94□□□□□ -1.14
TOP3A-217ENST00000584582 HERV-K104P63124 156 aa7.94□□□□□ -1.14
TOP3A-217ENST00000584582 ANAPC13Q9BS18 74 aa7.93□□□□□ -1.14
TOP3A-217ENST00000584582 C19orf73Q9NVV2 129 aa7.93□□□□□ -1.14
TOP3A-217ENST00000584582 ZNF561-AS1K7EIQ3 104 aa7.93□□□□□ -1.14
TOP3A-217ENST00000584582 C15orf53Q8NAA6 179 aa7.93□□□□□ -1.14
TOP3A-217ENST00000584582 TRAV13-2A0A0B4J235 113 aa7.92□□□□□ -1.14
TOP3A-217ENST00000584582 TRBV10-2A0A0K0K1G8 114 aa7.92□□□□□ -1.14
TOP3A-217ENST00000584582 SPAG11BQ08648 103 aa7.92□□□□□ -1.14
TOP3A-217ENST00000584582 SOSTDC1Q6X4U4 206 aa7.91□□□□□ -1.14
TOP3A-217ENST00000584582 X6R8D5 127 aa7.91□□□□□ -1.14
TOP3A-217ENST00000584582 PLAC8L1A1L4L8 177 aa7.91□□□□□ -1.14
TOP3A-217ENST00000584582 FAM104AQ969W3 186 aa7.9□□□□□ -1.14
TOP3A-217ENST00000584582 CCL18P55774 89 aa7.9□□□□□ -1.14
TOP3A-217ENST00000584582 C6orf223Q8N319 242 aa7.9□□□□□ -1.14
TOP3A-217ENST00000584582 CSNK1G2-AS1Q8NCQ2 148 aa7.9□□□□□ -1.14
TOP3A-217ENST00000584582 SPANXDQ9BXN6 97 aa7.9□□□□□ -1.14
TOP3A-217ENST00000584582 SPANXCQ9NY87 97 aa7.9□□□□□ -1.14
TOP3A-217ENST00000584582 A8MTW9 85 aa7.9□□□□□ -1.15
TOP3A-217ENST00000584582 TRBV30A0A0K0K1B3 111 aa7.89□□□□□ -1.15
TOP3A-217ENST00000584582 LYRM9A8MSI8 78 aa7.89□□□□□ -1.15
TOP3A-217ENST00000584582 H7C423 109 aa7.89□□□□□ -1.15
TOP3A-217ENST00000584582 XGP55808 180 aa7.89□□□□□ -1.15
TOP3A-217ENST00000584582 RPL18AQ02543 176 aaKnown RBP7.89□□□□□ -1.15
TOP3A-217ENST00000584582 OVOL2Q9BRP0 275 aa7.89□□□□□ -1.15
TOP3A-217ENST00000584582 LAMTOR3Q9UHA4 124 aa7.89□□□□□ -1.15
TOP3A-217ENST00000584582 PRO0461Q9UI25 63 aa7.89□□□□□ -1.15
TOP3A-217ENST00000584582 NANOS2P60321 138 aaKnown RBP7.89□□□□□ -1.15
TOP3A-217ENST00000584582 KMT2BQ9UMN6 2715 aaPredicted RBP7.88□□□□□ -1.15
TOP3A-217ENST00000584582 Q6ZTC4 211 aa7.88□□□□□ -1.15
TOP3A-217ENST00000584582 LITAFQ99732 161 aa7.88□□□□□ -1.15
TOP3A-217ENST00000584582 UNQ6190/PRO20217Q6UXQ8 127 aa7.88□□□□□ -1.15
TOP3A-217ENST00000584582 SMIM9A6NGZ8 99 aa7.88□□□□□ -1.15
TOP3A-217ENST00000584582 CAMK2N2Q96S95 79 aa7.88□□□□□ -1.15
TOP3A-217ENST00000584582 SS18L2Q9UHA2 77 aa7.87□□□□□ -1.15
TOP3A-217ENST00000584582 DPH3Q96FX2 82 aa7.87□□□□□ -1.15
TOP3A-217ENST00000584582 KPRPQ5T749 579 aaPredicted RBP7.87□□□□□ -1.15
TOP3A-217ENST00000584582 SMIM11BQ8TCY0 68 aa7.87□□□□□ -1.15
TOP3A-217ENST00000584582 C14orf132Q9NPU4 83 aa7.87□□□□□ -1.15
TOP3A-217ENST00000584582 IGHV3OR16-9A0A0B4J2B5 98 aa7.86□□□□□ -1.15
TOP3A-217ENST00000584582 KIR2DL5BQ8NHK3 375 aa7.86□□□□□ -1.15
TOP3A-217ENST00000584582 B5MCH6 92 aa7.86□□□□□ -1.15
TOP3A-217ENST00000584582 MIFP14174 115 aa7.86□□□□□ -1.15
TOP3A-217ENST00000584582 A0A0J9YWU9 116 aa7.85□□□□□ -1.15
TOP3A-217ENST00000584582 LINC00337Q8N6G1 96 aa7.85□□□□□ -1.15
TOP3A-217ENST00000584582 IGLV5-39A0A0G2JS06 123 aa7.85□□□□□ -1.15
TOP3A-217ENST00000584582 C1orf43Q9BWL3 253 aa7.85□□□□□ -1.15
TOP3A-217ENST00000584582 CSDC2Q9Y534 153 aaKnown RBP7.85□□□□□ -1.15
TOP3A-217ENST00000584582 DEFB131BA0A096LNP1 70 aa7.85□□□□□ -1.15
TOP3A-217ENST00000584582 LST1O00453 97 aa7.85□□□□□ -1.15
TOP3A-217ENST00000584582 HIST1H4AP62805 103 aaKnown RBP7.85□□□□□ -1.15
TOP3A-217ENST00000584582 A0A087WZ39 114 aa7.84□□□□□ -1.15
TOP3A-217ENST00000584582 C11orf45Q8TAV5 145 aa7.84□□□□□ -1.15
TOP3A-217ENST00000584582 SCGB1A1P11684 91 aa7.84□□□□□ -1.15
TOP3A-217ENST00000584582 WFDC10BQ8IUB3 73 aa7.84□□□□□ -1.15
TOP3A-217ENST00000584582 RNF183Q96D59 192 aa7.84□□□□□ -1.15
TOP3A-217ENST00000584582 IGKV3D-7A0A0C4DH55 119 aa7.83□□□□□ -1.16
TOP3A-217ENST00000584582 IBA57-AS1B1ANH7 110 aa7.83□□□□□ -1.16
TOP3A-217ENST00000584582 TIMM17BO60830 172 aa7.83□□□□□ -1.16
TOP3A-217ENST00000584582 CD164L2Q6UWJ8 174 aa7.83□□□□□ -1.16
TOP3A-217ENST00000584582 C6orf99Q4VX62 202 aa7.82□□□□□ -1.16
TOP3A-217ENST00000584582 A0A087WYN8 130 aa7.82□□□□□ -1.16
TOP3A-217ENST00000584582 CYSRT1A8MQ03 144 aa7.82□□□□□ -1.16
TOP3A-217ENST00000584582 SBSPONQ8IVN8 264 aa7.82□□□□□ -1.16
TOP3A-217ENST00000584582 H3BT86 120 aa7.82□□□□□ -1.16
TOP3A-217ENST00000584582 DEFB105AQ8NG35 78 aa7.82□□□□□ -1.16
TOP3A-217ENST00000584582 KRTAP24-1Q3LI83 254 aa7.81□□□□□ -1.16
TOP3A-217ENST00000584582 STAB2Q8WWQ8 2551 aa7.81□□□□□ -1.16
TOP3A-217ENST00000584582 IGLV5-45A0A087WSX0 123 aa7.81□□□□□ -1.16
TOP3A-217ENST00000584582 IL17DQ8TAD2 202 aa7.81□□□□□ -1.16
TOP3A-217ENST00000584582 FAM218AQ96MZ4 157 aa7.81□□□□□ -1.16
TOP3A-217ENST00000584582 C10orf25Q5T742 122 aa7.8□□□□□ -1.16
TOP3A-217ENST00000584582 UBE2DNLQ8IWF7 75 aa7.8□□□□□ -1.16
TOP3A-217ENST00000584582 SPATA25Q9BR10 227 aa7.8□□□□□ -1.16
TOP3A-217ENST00000584582 PKD1L1Q8TDX9 2849 aa7.8□□□□□ -1.16
TOP3A-217ENST00000584582 TENM3Q9P273 2699 aa7.8□□□□□ -1.16
TOP3A-217ENST00000584582 CDIP1Q9H305 208 aa7.79□□□□□ -1.16
TOP3A-217ENST00000584582 PSCAO43653 123 aa7.79□□□□□ -1.16
TOP3A-217ENST00000584582 LELP1Q5T871 98 aa7.79□□□□□ -1.16
TOP3A-217ENST00000584582 ORMDL1Q9P0S3 153 aa7.79□□□□□ -1.16
TOP3A-217ENST00000584582 TRRAPQ9Y4A5 3859 aa7.79□□□□□ -1.16
TOP3A-217ENST00000584582 CITED1Q99966 193 aa7.78□□□□□ -1.16
TOP3A-217ENST00000584582 Q8NAQ8 132 aa7.78□□□□□ -1.16
TOP3A-217ENST00000584582 INAFM2P0DMQ5 153 aa7.77□□□□□ -1.16
TOP3A-217ENST00000584582 TMEM126AQ9H061 195 aa7.77□□□□□ -1.16
TOP3A-217ENST00000584582 H0YGX0 51 aa7.77□□□□□ -1.17
TOP3A-217ENST00000584582 Q8IZM0 81 aa7.76□□□□□ -1.17
TOP3A-217ENST00000584582 HAMPP81172 84 aa7.76□□□□□ -1.17
TOP3A-217ENST00000584582 LYPD5Q6UWN5 251 aa7.76□□□□□ -1.17
TOP3A-217ENST00000584582 NKAPP1Q8N9T2 125 aa7.76□□□□□ -1.17
TOP3A-217ENST00000584582 IGKV2-28A0A075B6P5 120 aa7.75□□□□□ -1.17
TOP3A-217ENST00000584582 IGKV2D-28P01615 120 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms