RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	FHL2	Q14192	279 aa		9.31	□□□□□ -0.92
CSNK1D-222	ENST00000584377	COX7A2L	O14548	114 aa		9.3	□□□□□ -0.92
CSNK1D-222	ENST00000584377	TMEM258	P61165	79 aa		9.3	□□□□□ -0.92
CSNK1D-222	ENST00000584377	NOTCH2	Q04721	2471 aa		9.29	□□□□□ -0.92
CSNK1D-222	ENST00000584377	OXT	P01178	125 aa		9.29	□□□□□ -0.92
CSNK1D-222	ENST00000584377	C4orf26	Q17RF5	130 aa		9.29	□□□□□ -0.92
CSNK1D-222	ENST00000584377	FN1	P02751	2386 aa	Known RBP	9.29	□□□□□ -0.92
CSNK1D-222	ENST00000584377	KMT2B	Q9UMN6	2715 aa	Predicted RBP	9.29	□□□□□ -0.92
CSNK1D-222	ENST00000584377	TRBV6-8	A0A0A6YYG3	113 aa		9.29	□□□□□ -0.92
CSNK1D-222	ENST00000584377	BAALC-AS2	P0C853	105 aa		9.29	□□□□□ -0.92
CSNK1D-222	ENST00000584377	DEFB130B	P0DP73	79 aa		9.29	□□□□□ -0.92
CSNK1D-222	ENST00000584377	DEFB130A	P0DP74	79 aa		9.29	□□□□□ -0.92
CSNK1D-222	ENST00000584377	LINC00482	Q8N8I6	264 aa		9.29	□□□□□ -0.92
CSNK1D-222	ENST00000584377	IGKV3OR2-268	A0A0C4DH90	116 aa		9.28	□□□□□ -0.92
CSNK1D-222	ENST00000584377	COPS9	Q8WXC6	57 aa		9.28	□□□□□ -0.92
CSNK1D-222	ENST00000584377	DSCR8	Q96T75	97 aa		9.28	□□□□□ -0.92
CSNK1D-222	ENST00000584377	RPL18A	Q02543	176 aa	Known RBP	9.27	□□□□□ -0.92
CSNK1D-222	ENST00000584377	C22orf24	Q9Y442	160 aa		9.27	□□□□□ -0.92
CSNK1D-222	ENST00000584377	IGLV4-60	A0A075B6I1	120 aa		9.27	□□□□□ -0.93
CSNK1D-222	ENST00000584377	SOSTDC1	Q6X4U4	206 aa		9.27	□□□□□ -0.93
CSNK1D-222	ENST00000584377	HECTD1	Q9ULT8	2610 aa		9.26	□□□□□ -0.93
CSNK1D-222	ENST00000584377	GCN1	Q92616	2671 aa	Known RBP	9.26	□□□□□ -0.93
CSNK1D-222	ENST00000584377	HRCT1	Q6UXD1	115 aa		9.26	□□□□□ -0.93
CSNK1D-222	ENST00000584377	LY6G6D	O95868	133 aa		9.25	□□□□□ -0.93
CSNK1D-222	ENST00000584377	INAFM2	P0DMQ5	153 aa		9.25	□□□□□ -0.93
CSNK1D-222	ENST00000584377		Q5XG85	94 aa		9.25	□□□□□ -0.93
CSNK1D-222	ENST00000584377	SERP2	Q8N6R1	65 aa		9.25	□□□□□ -0.93
CSNK1D-222	ENST00000584377	UPK3B	Q9BT76	320 aa		9.25	□□□□□ -0.93
CSNK1D-222	ENST00000584377	COX7B2	Q8TF08	81 aa		9.24	□□□□□ -0.93
CSNK1D-222	ENST00000584377	TOMM7	Q9P0U1	55 aa		9.24	□□□□□ -0.93
CSNK1D-222	ENST00000584377	NBEAL2	Q6ZNJ1	2754 aa		9.23	□□□□□ -0.93
CSNK1D-222	ENST00000584377	LINC00612	Q8N6U2	182 aa		9.23	□□□□□ -0.93
CSNK1D-222	ENST00000584377	VWF	P04275	2813 aa		9.23	□□□□□ -0.93
CSNK1D-222	ENST00000584377		X6R8D5	127 aa		9.23	□□□□□ -0.93
CSNK1D-222	ENST00000584377	GYPE	P15421	78 aa		9.22	□□□□□ -0.93
CSNK1D-222	ENST00000584377	FAM222A	Q5U5X8	452 aa		9.22	□□□□□ -0.93
CSNK1D-222	ENST00000584377	IGHV3OR16-9	A0A0B4J2B5	98 aa		9.22	□□□□□ -0.93
CSNK1D-222	ENST00000584377	FAM218A	Q96MZ4	157 aa		9.22	□□□□□ -0.93
CSNK1D-222	ENST00000584377	IGKV3D-7	A0A0C4DH55	119 aa		9.21	□□□□□ -0.93
CSNK1D-222	ENST00000584377	SPATA3	Q8NHX4	192 aa		9.21	□□□□□ -0.94
CSNK1D-222	ENST00000584377		A0A087WVE0	104 aa		9.2	□□□□□ -0.94
CSNK1D-222	ENST00000584377		A0A087WZ39	114 aa		9.2	□□□□□ -0.94
CSNK1D-222	ENST00000584377	MIR7-3HG	Q8N6C7	128 aa		9.2	□□□□□ -0.94
CSNK1D-222	ENST00000584377	MAL	P21145	153 aa		9.19	□□□□□ -0.94
CSNK1D-222	ENST00000584377	C9orf66	Q5T8R8	295 aa		9.19	□□□□□ -0.94
CSNK1D-222	ENST00000584377		Q9HAA7	133 aa		9.19	□□□□□ -0.94
CSNK1D-222	ENST00000584377	PRO0255	Q9UI72	69 aa		9.19	□□□□□ -0.94
CSNK1D-222	ENST00000584377	OTOG	Q6ZRI0	2925 aa		9.19	□□□□□ -0.94
CSNK1D-222	ENST00000584377	LINC00959	A0A1B0GUT2	108 aa		9.19	□□□□□ -0.94
CSNK1D-222	ENST00000584377	MRAP	Q8TCY5	172 aa		9.19	□□□□□ -0.94
CSNK1D-222	ENST00000584377	INAFM1	C9JVW0	142 aa		9.18	□□□□□ -0.94
CSNK1D-222	ENST00000584377	DNAL4	O96015	105 aa		9.18	□□□□□ -0.94
CSNK1D-222	ENST00000584377	USP17L23	D6RBM5	183 aa		9.18	□□□□□ -0.94
CSNK1D-222	ENST00000584377	LINC01561	Q8N1V8	128 aa		9.18	□□□□□ -0.94
CSNK1D-222	ENST00000584377	NSD1	Q96L73	2696 aa	Predicted RBP	9.18	□□□□□ -0.94
CSNK1D-222	ENST00000584377	LINC00158	P58513	81 aa		9.18	□□□□□ -0.94
CSNK1D-222	ENST00000584377		Q6JHZ5	121 aa		9.18	□□□□□ -0.94
CSNK1D-222	ENST00000584377		A0A096LPF7	62 aa		9.17	□□□□□ -0.94
CSNK1D-222	ENST00000584377	DEFB135	Q30KP9	77 aa		9.17	□□□□□ -0.94
CSNK1D-222	ENST00000584377	TRAV13-2	A0A0B4J235	113 aa		9.16	□□□□□ -0.94
CSNK1D-222	ENST00000584377	SND1-IT1	Q9HBX3	110 aa		9.16	□□□□□ -0.94
CSNK1D-222	ENST00000584377	LINC00846	Q9NV44	126 aa		9.16	□□□□□ -0.94
CSNK1D-222	ENST00000584377		A0A1B0GUV1	79 aa		9.16	□□□□□ -0.94
CSNK1D-222	ENST00000584377	LYRM9	A8MSI8	78 aa		9.16	□□□□□ -0.94
CSNK1D-222	ENST00000584377	PAX4	O43316	350 aa		9.16	□□□□□ -0.94
CSNK1D-222	ENST00000584377	CRP	P02741	224 aa		9.16	□□□□□ -0.94
CSNK1D-222	ENST00000584377	XCL1	P47992	114 aa		9.16	□□□□□ -0.94
CSNK1D-222	ENST00000584377	C14orf132	Q9NPU4	83 aa		9.16	□□□□□ -0.94
CSNK1D-222	ENST00000584377	TENM1	Q9UKZ4	2725 aa		9.15	□□□□□ -0.94
CSNK1D-222	ENST00000584377	DEFB4A	O15263	64 aa		9.15	□□□□□ -0.94
CSNK1D-222	ENST00000584377	C9orf129	Q5T035	196 aa	Known RBP	9.15	□□□□□ -0.94
CSNK1D-222	ENST00000584377	IBA57-AS1	B1ANH7	110 aa		9.15	□□□□□ -0.94
CSNK1D-222	ENST00000584377	SS18	Q15532	418 aa		9.15	□□□□□ -0.94
CSNK1D-222	ENST00000584377	CLPSL2	Q6UWE3	100 aa		9.14	□□□□□ -0.95
CSNK1D-222	ENST00000584377	PFN2	P35080	140 aa		9.14	□□□□□ -0.95
CSNK1D-222	ENST00000584377	C6orf226	Q5I0X4	101 aa		9.14	□□□□□ -0.95
CSNK1D-222	ENST00000584377	LINC00337	Q8N6G1	96 aa		9.14	□□□□□ -0.95
CSNK1D-222	ENST00000584377	IGKV2-28	A0A075B6P5	120 aa		9.14	□□□□□ -0.95
CSNK1D-222	ENST00000584377	IGKV2D-28	P01615	120 aa		9.14	□□□□□ -0.95
CSNK1D-222	ENST00000584377	C11orf68	Q9H3H3	251 aa	Known RBP	9.14	□□□□□ -0.95
CSNK1D-222	ENST00000584377	APOC4	P55056	127 aa		9.13	□□□□□ -0.95
CSNK1D-222	ENST00000584377	CCL18	P55774	89 aa		9.13	□□□□□ -0.95
CSNK1D-222	ENST00000584377	RPL28	P46779	137 aa	Known RBP	9.12	□□□□□ -0.95
CSNK1D-222	ENST00000584377	ATR	Q13535	2644 aa		9.12	□□□□□ -0.95
CSNK1D-222	ENST00000584377	IGHV4-28	A0A0C4DH34	117 aa		9.12	□□□□□ -0.95
CSNK1D-222	ENST00000584377	DAD1	P61803	113 aa		9.11	□□□□□ -0.95
CSNK1D-222	ENST00000584377		Q8IZM0	81 aa		9.1	□□□□□ -0.95
CSNK1D-222	ENST00000584377	NDUFC2	O95298	119 aa		9.1	□□□□□ -0.95
CSNK1D-222	ENST00000584377	LINC00269	Q8N2A0	174 aa		9.1	□□□□□ -0.95
CSNK1D-222	ENST00000584377	NDUFC2-KCTD14	E9PQ53	114 aa		9.09	□□□□□ -0.95
CSNK1D-222	ENST00000584377	OBSCN-AS1	Q96MR7	158 aa		9.09	□□□□□ -0.95
CSNK1D-222	ENST00000584377		A0A087WYN8	130 aa		9.09	□□□□□ -0.95
CSNK1D-222	ENST00000584377	SMIM11B	Q8TCY0	68 aa		9.09	□□□□□ -0.95
CSNK1D-222	ENST00000584377	PRO0628	Q9UI54	55 aa		9.09	□□□□□ -0.95
CSNK1D-222	ENST00000584377	CELA1	Q9UNI1	258 aa		9.08	□□□□□ -0.96
CSNK1D-222	ENST00000584377	HIVEP1	P15822	2718 aa		9.08	□□□□□ -0.96
CSNK1D-222	ENST00000584377		Q8NAQ8	132 aa		9.08	□□□□□ -0.96
CSNK1D-222	ENST00000584377	GHRH	P01286	108 aa		9.07	□□□□□ -0.96
CSNK1D-222	ENST00000584377	ANG	P03950	147 aa	Known RBP	9.07	□□□□□ -0.96
CSNK1D-222	ENST00000584377	LINC00336	Q6ZUF6	198 aa		9.07	□□□□□ -0.96

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