RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 LRP2P98164 4655 aa12.95□□□□□ -0.34
CSNK1D-216ENST00000581108 SEC11AP67812 179 aa12.95□□□□□ -0.34
CSNK1D-216ENST00000581108 ERASQ7Z444 233 aa12.95□□□□□ -0.34
CSNK1D-216ENST00000581108 SCGB3A1Q96QR1 104 aa12.95□□□□□ -0.34
CSNK1D-216ENST00000581108 SEC11CQ9BY50 192 aa12.95□□□□□ -0.34
CSNK1D-216ENST00000581108 GEMIN7Q9H840 131 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-216ENST00000581108 GNB1LQ9BYB4 327 aa12.94□□□□□ -0.34
CSNK1D-216ENST00000581108 S100PP25815 95 aa12.93□□□□□ -0.34
CSNK1D-216ENST00000581108 UBE2BP63146 152 aa12.93□□□□□ -0.34
CSNK1D-216ENST00000581108 DIRC1Q969H9 104 aa12.93□□□□□ -0.34
CSNK1D-216ENST00000581108 LINC00469Q8N7U9 141 aa12.92□□□□□ -0.34
CSNK1D-216ENST00000581108 LINC01546A6NGU7 62 aa12.9□□□□□ -0.34
CSNK1D-216ENST00000581108 XAGE1AQ9HD64 81 aa12.9□□□□□ -0.34
CSNK1D-216ENST00000581108 H0Y9J4 135 aa12.89□□□□□ -0.35
CSNK1D-216ENST00000581108 COMMD7Q86VX2 200 aa12.89□□□□□ -0.35
CSNK1D-216ENST00000581108 F8VRH5 84 aa12.88□□□□□ -0.35
CSNK1D-216ENST00000581108 PRR26Q8N8Z3 221 aa12.88□□□□□ -0.35
CSNK1D-216ENST00000581108 TINCRA0A1B0GVN0 87 aa12.87□□□□□ -0.35
CSNK1D-216ENST00000581108 SMIM1B2RUZ4 78 aa12.87□□□□□ -0.35
CSNK1D-216ENST00000581108 MRPL18Q9H0U6 180 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-216ENST00000581108 FABP9Q0Z7S8 132 aa12.86□□□□□ -0.35
CSNK1D-216ENST00000581108 COX19Q49B96 90 aa12.86□□□□□ -0.35
CSNK1D-216ENST00000581108 C10orf91Q5T1B1 145 aa12.86□□□□□ -0.35
CSNK1D-216ENST00000581108 CST9LQ9H4G1 147 aa12.86□□□□□ -0.35
CSNK1D-216ENST00000581108 C22orf24Q9Y442 160 aa12.86□□□□□ -0.35
CSNK1D-216ENST00000581108 LINC01549A6NIU2 74 aa12.85□□□□□ -0.35
CSNK1D-216ENST00000581108 IGLV5-45A0A087WSX0 123 aa12.84□□□□□ -0.35
CSNK1D-216ENST00000581108 PDZD11Q5EBL8 140 aa12.84□□□□□ -0.35
CSNK1D-216ENST00000581108 FA2HQ7L5A8 372 aa12.84□□□□□ -0.35
CSNK1D-216ENST00000581108 COX7B2Q8TF08 81 aa12.84□□□□□ -0.35
CSNK1D-216ENST00000581108 RPS10P5Q9NQ39 176 aa12.84□□□□□ -0.35
CSNK1D-216ENST00000581108 CXCL5P42830 114 aa12.83□□□□□ -0.36
CSNK1D-216ENST00000581108 SMCO4Q9NRQ5 59 aa12.83□□□□□ -0.36
CSNK1D-216ENST00000581108 KRTAP1-4P0C5Y4 121 aa12.82□□□□□ -0.36
CSNK1D-216ENST00000581108 PMVKQ15126 192 aa12.82□□□□□ -0.36
CSNK1D-216ENST00000581108 CARHSP1Q9Y2V2 147 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-216ENST00000581108 SPINK8P0C7L1 97 aa12.81□□□□□ -0.36
CSNK1D-216ENST00000581108 RHEBQ15382 184 aa12.81□□□□□ -0.36
CSNK1D-216ENST00000581108 LBHQ53QV2 105 aaPredicted RBP12.8□□□□□ -0.36
CSNK1D-216ENST00000581108 RNF213Q63HN8 5207 aa12.79□□□□□ -0.36
CSNK1D-216ENST00000581108 RAB5BP61020 215 aa12.78□□□□□ -0.36
CSNK1D-216ENST00000581108 IGLV1-50A0A075B6I6 118 aa12.77□□□□□ -0.37
CSNK1D-216ENST00000581108 ZNF861PO60384 105 aa12.77□□□□□ -0.37
CSNK1D-216ENST00000581108 MRPL55Q7Z7F7 128 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-216ENST00000581108 URB1-AS1Q96HZ7 61 aa12.77□□□□□ -0.37
CSNK1D-216ENST00000581108 TP73-AS1Q9UF72 201 aa12.77□□□□□ -0.37
CSNK1D-216ENST00000581108 A0A096LNJ9 63 aa12.76□□□□□ -0.37
CSNK1D-216ENST00000581108 NUPR1O60356 82 aa12.76□□□□□ -0.37
CSNK1D-216ENST00000581108 TRAPPC1Q9Y5R8 145 aa12.76□□□□□ -0.37
CSNK1D-216ENST00000581108 H3BRM9 83 aa12.74□□□□□ -0.37
CSNK1D-216ENST00000581108 LINC00614P0C842 121 aa12.74□□□□□ -0.37
CSNK1D-216ENST00000581108 NDUFA6P56556 154 aa12.74□□□□□ -0.37
CSNK1D-216ENST00000581108 C18orf32Q8TCD1 76 aa12.74□□□□□ -0.37
CSNK1D-216ENST00000581108 IGLC3P0DOY3 106 aa12.73□□□□□ -0.37
CSNK1D-216ENST00000581108 LINC00167Q96N53 147 aa12.73□□□□□ -0.37
CSNK1D-216ENST00000581108 LPAP08519 4548 aa12.72□□□□□ -0.37
CSNK1D-216ENST00000581108 RPL37AP8A6NKH3 93 aa12.72□□□□□ -0.37
CSNK1D-216ENST00000581108 PMCHL1Q16048 86 aa12.71□□□□□ -0.37
CSNK1D-216ENST00000581108 IGLV5-39A0A0G2JS06 123 aa12.7□□□□□ -0.38
CSNK1D-216ENST00000581108 GAGE10A6NGK3 116 aa12.7□□□□□ -0.38
CSNK1D-216ENST00000581108 ATP5LO75964 103 aa12.7□□□□□ -0.38
CSNK1D-216ENST00000581108 APOC3P02656 99 aa12.7□□□□□ -0.38
CSNK1D-216ENST00000581108 BCE1O60756 84 aa12.69□□□□□ -0.38
CSNK1D-216ENST00000581108 HBDP02042 147 aa12.69□□□□□ -0.38
CSNK1D-216ENST00000581108 ZNF22P17026 224 aaPredicted RBP12.69□□□□□ -0.38
CSNK1D-216ENST00000581108 PFN2P35080 140 aa12.68□□□□□ -0.38
CSNK1D-216ENST00000581108 RPL13AP40429 203 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-216ENST00000581108 IGLV5-37A0A075B6J1 123 aa12.67□□□□□ -0.38
CSNK1D-216ENST00000581108 RPL28P46779 137 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-216ENST00000581108 BAGE3Q86Y29 109 aa12.65□□□□□ -0.38
CSNK1D-216ENST00000581108 NKAPP1Q8N9T2 125 aa12.65□□□□□ -0.38
CSNK1D-216ENST00000581108 C11orf86A6NJI1 115 aa12.64□□□□□ -0.39
CSNK1D-216ENST00000581108 SCO1O75880 301 aa12.64□□□□□ -0.39
CSNK1D-216ENST00000581108 SNAPINO95295 136 aa12.64□□□□□ -0.39
CSNK1D-216ENST00000581108 SVBPQ8N300 66 aa12.63□□□□□ -0.39
CSNK1D-216ENST00000581108 NDUFA5Q16718 116 aa12.62□□□□□ -0.39
CSNK1D-216ENST00000581108 ZNF625Q96I27 306 aaPredicted RBP12.62□□□□□ -0.39
CSNK1D-216ENST00000581108 ERG28Q9UKR5 140 aa12.62□□□□□ -0.39
CSNK1D-216ENST00000581108 TMEM170BQ5T4T1 132 aa12.61□□□□□ -0.39
CSNK1D-216ENST00000581108 SND1-IT1Q9HBX3 110 aa12.61□□□□□ -0.39
CSNK1D-216ENST00000581108 IGKV2-28A0A075B6P5 120 aa12.6□□□□□ -0.39
CSNK1D-216ENST00000581108 A0A087X002 238 aa12.6□□□□□ -0.39
CSNK1D-216ENST00000581108 IGKV2D-28P01615 120 aa12.6□□□□□ -0.39
CSNK1D-216ENST00000581108 KRTAP13-1Q8IUC0 172 aa12.59□□□□□ -0.39
CSNK1D-216ENST00000581108 YPEL4Q96NS1 127 aa12.59□□□□□ -0.39
CSNK1D-216ENST00000581108 VPREB1P12018 145 aa12.58□□□□□ -0.4
CSNK1D-216ENST00000581108 UBE2AP49459 152 aa12.58□□□□□ -0.4
CSNK1D-216ENST00000581108 COX17Q14061 63 aa12.58□□□□□ -0.4
CSNK1D-216ENST00000581108 ANAPC11Q9NYG5 84 aa12.58□□□□□ -0.4
CSNK1D-216ENST00000581108 CHTOPQ9Y3Y2 248 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-216ENST00000581108 TSPAN13O95857 204 aa12.56□□□□□ -0.4
CSNK1D-216ENST00000581108 CRYGAP11844 174 aa12.56□□□□□ -0.4
CSNK1D-216ENST00000581108 PRR4Q16378 134 aa12.56□□□□□ -0.4
CSNK1D-216ENST00000581108 Q8NDZ9 215 aa12.55□□□□□ -0.4
CSNK1D-216ENST00000581108 RPL24P83731 157 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-216ENST00000581108 TYMSOSQ8TAI1 123 aa12.54□□□□□ -0.4
CSNK1D-216ENST00000581108 CHCHD1Q96BP2 118 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-216ENST00000581108 TMEM238C9JI98 176 aa12.53□□□□□ -0.4
CSNK1D-216ENST00000581108 SFTA2Q6UW10 78 aa12.53□□□□□ -0.4
CSNK1D-216ENST00000581108 IFI27L1Q96BM0 104 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms