RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 LRP2P98164 4655 aa12.95□□□□□ -0.34
CSNK1D-215ENST00000580784 SEC11AP67812 179 aa12.95□□□□□ -0.34
CSNK1D-215ENST00000580784 ERASQ7Z444 233 aa12.95□□□□□ -0.34
CSNK1D-215ENST00000580784 SCGB3A1Q96QR1 104 aa12.95□□□□□ -0.34
CSNK1D-215ENST00000580784 SEC11CQ9BY50 192 aa12.95□□□□□ -0.34
CSNK1D-215ENST00000580784 GEMIN7Q9H840 131 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-215ENST00000580784 GNB1LQ9BYB4 327 aa12.94□□□□□ -0.34
CSNK1D-215ENST00000580784 S100PP25815 95 aa12.93□□□□□ -0.34
CSNK1D-215ENST00000580784 UBE2BP63146 152 aa12.93□□□□□ -0.34
CSNK1D-215ENST00000580784 DIRC1Q969H9 104 aa12.93□□□□□ -0.34
CSNK1D-215ENST00000580784 LINC00469Q8N7U9 141 aa12.92□□□□□ -0.34
CSNK1D-215ENST00000580784 LINC01546A6NGU7 62 aa12.9□□□□□ -0.34
CSNK1D-215ENST00000580784 XAGE1AQ9HD64 81 aa12.9□□□□□ -0.34
CSNK1D-215ENST00000580784 H0Y9J4 135 aa12.89□□□□□ -0.35
CSNK1D-215ENST00000580784 COMMD7Q86VX2 200 aa12.89□□□□□ -0.35
CSNK1D-215ENST00000580784 F8VRH5 84 aa12.88□□□□□ -0.35
CSNK1D-215ENST00000580784 PRR26Q8N8Z3 221 aa12.88□□□□□ -0.35
CSNK1D-215ENST00000580784 TINCRA0A1B0GVN0 87 aa12.87□□□□□ -0.35
CSNK1D-215ENST00000580784 SMIM1B2RUZ4 78 aa12.87□□□□□ -0.35
CSNK1D-215ENST00000580784 MRPL18Q9H0U6 180 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-215ENST00000580784 FABP9Q0Z7S8 132 aa12.86□□□□□ -0.35
CSNK1D-215ENST00000580784 COX19Q49B96 90 aa12.86□□□□□ -0.35
CSNK1D-215ENST00000580784 C10orf91Q5T1B1 145 aa12.86□□□□□ -0.35
CSNK1D-215ENST00000580784 CST9LQ9H4G1 147 aa12.86□□□□□ -0.35
CSNK1D-215ENST00000580784 C22orf24Q9Y442 160 aa12.86□□□□□ -0.35
CSNK1D-215ENST00000580784 LINC01549A6NIU2 74 aa12.85□□□□□ -0.35
CSNK1D-215ENST00000580784 IGLV5-45A0A087WSX0 123 aa12.84□□□□□ -0.35
CSNK1D-215ENST00000580784 PDZD11Q5EBL8 140 aa12.84□□□□□ -0.35
CSNK1D-215ENST00000580784 FA2HQ7L5A8 372 aa12.84□□□□□ -0.35
CSNK1D-215ENST00000580784 COX7B2Q8TF08 81 aa12.84□□□□□ -0.35
CSNK1D-215ENST00000580784 RPS10P5Q9NQ39 176 aa12.84□□□□□ -0.35
CSNK1D-215ENST00000580784 CXCL5P42830 114 aa12.83□□□□□ -0.36
CSNK1D-215ENST00000580784 SMCO4Q9NRQ5 59 aa12.83□□□□□ -0.36
CSNK1D-215ENST00000580784 KRTAP1-4P0C5Y4 121 aa12.82□□□□□ -0.36
CSNK1D-215ENST00000580784 PMVKQ15126 192 aa12.82□□□□□ -0.36
CSNK1D-215ENST00000580784 CARHSP1Q9Y2V2 147 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-215ENST00000580784 SPINK8P0C7L1 97 aa12.81□□□□□ -0.36
CSNK1D-215ENST00000580784 RHEBQ15382 184 aa12.81□□□□□ -0.36
CSNK1D-215ENST00000580784 LBHQ53QV2 105 aaPredicted RBP12.8□□□□□ -0.36
CSNK1D-215ENST00000580784 RNF213Q63HN8 5207 aa12.79□□□□□ -0.36
CSNK1D-215ENST00000580784 RAB5BP61020 215 aa12.78□□□□□ -0.36
CSNK1D-215ENST00000580784 IGLV1-50A0A075B6I6 118 aa12.77□□□□□ -0.37
CSNK1D-215ENST00000580784 ZNF861PO60384 105 aa12.77□□□□□ -0.37
CSNK1D-215ENST00000580784 MRPL55Q7Z7F7 128 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-215ENST00000580784 URB1-AS1Q96HZ7 61 aa12.77□□□□□ -0.37
CSNK1D-215ENST00000580784 TP73-AS1Q9UF72 201 aa12.77□□□□□ -0.37
CSNK1D-215ENST00000580784 A0A096LNJ9 63 aa12.76□□□□□ -0.37
CSNK1D-215ENST00000580784 NUPR1O60356 82 aa12.76□□□□□ -0.37
CSNK1D-215ENST00000580784 TRAPPC1Q9Y5R8 145 aa12.76□□□□□ -0.37
CSNK1D-215ENST00000580784 H3BRM9 83 aa12.74□□□□□ -0.37
CSNK1D-215ENST00000580784 LINC00614P0C842 121 aa12.74□□□□□ -0.37
CSNK1D-215ENST00000580784 NDUFA6P56556 154 aa12.74□□□□□ -0.37
CSNK1D-215ENST00000580784 C18orf32Q8TCD1 76 aa12.74□□□□□ -0.37
CSNK1D-215ENST00000580784 IGLC3P0DOY3 106 aa12.73□□□□□ -0.37
CSNK1D-215ENST00000580784 LINC00167Q96N53 147 aa12.73□□□□□ -0.37
CSNK1D-215ENST00000580784 LPAP08519 4548 aa12.72□□□□□ -0.37
CSNK1D-215ENST00000580784 RPL37AP8A6NKH3 93 aa12.72□□□□□ -0.37
CSNK1D-215ENST00000580784 PMCHL1Q16048 86 aa12.71□□□□□ -0.37
CSNK1D-215ENST00000580784 IGLV5-39A0A0G2JS06 123 aa12.7□□□□□ -0.38
CSNK1D-215ENST00000580784 GAGE10A6NGK3 116 aa12.7□□□□□ -0.38
CSNK1D-215ENST00000580784 ATP5LO75964 103 aa12.7□□□□□ -0.38
CSNK1D-215ENST00000580784 APOC3P02656 99 aa12.7□□□□□ -0.38
CSNK1D-215ENST00000580784 BCE1O60756 84 aa12.69□□□□□ -0.38
CSNK1D-215ENST00000580784 HBDP02042 147 aa12.69□□□□□ -0.38
CSNK1D-215ENST00000580784 ZNF22P17026 224 aaPredicted RBP12.69□□□□□ -0.38
CSNK1D-215ENST00000580784 PFN2P35080 140 aa12.68□□□□□ -0.38
CSNK1D-215ENST00000580784 RPL13AP40429 203 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-215ENST00000580784 IGLV5-37A0A075B6J1 123 aa12.67□□□□□ -0.38
CSNK1D-215ENST00000580784 RPL28P46779 137 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-215ENST00000580784 BAGE3Q86Y29 109 aa12.65□□□□□ -0.38
CSNK1D-215ENST00000580784 NKAPP1Q8N9T2 125 aa12.65□□□□□ -0.38
CSNK1D-215ENST00000580784 C11orf86A6NJI1 115 aa12.64□□□□□ -0.39
CSNK1D-215ENST00000580784 SCO1O75880 301 aa12.64□□□□□ -0.39
CSNK1D-215ENST00000580784 SNAPINO95295 136 aa12.64□□□□□ -0.39
CSNK1D-215ENST00000580784 SVBPQ8N300 66 aa12.63□□□□□ -0.39
CSNK1D-215ENST00000580784 NDUFA5Q16718 116 aa12.62□□□□□ -0.39
CSNK1D-215ENST00000580784 ZNF625Q96I27 306 aaPredicted RBP12.62□□□□□ -0.39
CSNK1D-215ENST00000580784 ERG28Q9UKR5 140 aa12.62□□□□□ -0.39
CSNK1D-215ENST00000580784 TMEM170BQ5T4T1 132 aa12.61□□□□□ -0.39
CSNK1D-215ENST00000580784 SND1-IT1Q9HBX3 110 aa12.61□□□□□ -0.39
CSNK1D-215ENST00000580784 IGKV2-28A0A075B6P5 120 aa12.6□□□□□ -0.39
CSNK1D-215ENST00000580784 A0A087X002 238 aa12.6□□□□□ -0.39
CSNK1D-215ENST00000580784 IGKV2D-28P01615 120 aa12.6□□□□□ -0.39
CSNK1D-215ENST00000580784 KRTAP13-1Q8IUC0 172 aa12.59□□□□□ -0.39
CSNK1D-215ENST00000580784 YPEL4Q96NS1 127 aa12.59□□□□□ -0.39
CSNK1D-215ENST00000580784 VPREB1P12018 145 aa12.58□□□□□ -0.4
CSNK1D-215ENST00000580784 UBE2AP49459 152 aa12.58□□□□□ -0.4
CSNK1D-215ENST00000580784 COX17Q14061 63 aa12.58□□□□□ -0.4
CSNK1D-215ENST00000580784 ANAPC11Q9NYG5 84 aa12.58□□□□□ -0.4
CSNK1D-215ENST00000580784 CHTOPQ9Y3Y2 248 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-215ENST00000580784 TSPAN13O95857 204 aa12.56□□□□□ -0.4
CSNK1D-215ENST00000580784 CRYGAP11844 174 aa12.56□□□□□ -0.4
CSNK1D-215ENST00000580784 PRR4Q16378 134 aa12.56□□□□□ -0.4
CSNK1D-215ENST00000580784 Q8NDZ9 215 aa12.55□□□□□ -0.4
CSNK1D-215ENST00000580784 RPL24P83731 157 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-215ENST00000580784 TYMSOSQ8TAI1 123 aa12.54□□□□□ -0.4
CSNK1D-215ENST00000580784 CHCHD1Q96BP2 118 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-215ENST00000580784 TMEM238C9JI98 176 aa12.53□□□□□ -0.4
CSNK1D-215ENST00000580784 SFTA2Q6UW10 78 aa12.53□□□□□ -0.4
CSNK1D-215ENST00000580784 IFI27L1Q96BM0 104 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms