RNA–Protein interactions for RNA: ENST00000578318.1

ITGB4-204, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-204ENST00000578318 UBE2D1P51668 147 aa8.72□□□□□ -1.01
ITGB4-204ENST00000578318 ZC2HC1BQ5TFG8 222 aa8.72□□□□□ -1.01
ITGB4-204ENST00000578318 C2orf82Q6UX34 121 aa8.72□□□□□ -1.01
ITGB4-204ENST00000578318 C2orf88Q9BSF0 95 aa8.72□□□□□ -1.01
ITGB4-204ENST00000578318 MRPL18Q9H0U6 180 aaKnown RBP8.72□□□□□ -1.01
ITGB4-204ENST00000578318 LINC01546A6NGU7 62 aa8.71□□□□□ -1.02
ITGB4-204ENST00000578318 SNAPINO95295 136 aa8.71□□□□□ -1.02
ITGB4-204ENST00000578318 G0S2P27469 103 aa8.71□□□□□ -1.02
ITGB4-204ENST00000578318 FABP9Q0Z7S8 132 aa8.71□□□□□ -1.02
ITGB4-204ENST00000578318 NDUFA5Q16718 116 aa8.71□□□□□ -1.02
ITGB4-204ENST00000578318 C9orf129Q5T035 196 aaKnown RBP8.71□□□□□ -1.02
ITGB4-204ENST00000578318 Q6ZN92 141 aa8.71□□□□□ -1.02
ITGB4-204ENST00000578318 SVBPQ8N300 66 aa8.71□□□□□ -1.02
ITGB4-204ENST00000578318 TOMM6Q96B49 74 aa8.71□□□□□ -1.02
ITGB4-204ENST00000578318 VCX2Q9H322 139 aa8.71□□□□□ -1.02
ITGB4-204ENST00000578318 TIMM17AQ99595 171 aa8.7□□□□□ -1.02
ITGB4-204ENST00000578318 PRSS2P07478 247 aa8.68□□□□□ -1.02
ITGB4-204ENST00000578318 RPL13AP40429 203 aaKnown RBP8.68□□□□□ -1.02
ITGB4-204ENST00000578318 PAPPA-AS1Q5QFB9 102 aa8.68□□□□□ -1.02
ITGB4-204ENST00000578318 FAM19A3Q7Z5A8 133 aa8.68□□□□□ -1.02
ITGB4-204ENST00000578318 CKS1BP61024 79 aa8.67□□□□□ -1.02
ITGB4-204ENST00000578318 ERASQ7Z444 233 aa8.67□□□□□ -1.02
ITGB4-204ENST00000578318 TOMM7Q9P0U1 55 aa8.67□□□□□ -1.02
ITGB4-204ENST00000578318 FA2HQ7L5A8 372 aa8.66□□□□□ -1.02
ITGB4-204ENST00000578318 Q8IZM0 81 aa8.66□□□□□ -1.02
ITGB4-204ENST00000578318 SCGB3A1Q96QR1 104 aa8.66□□□□□ -1.02
ITGB4-204ENST00000578318 TRAPPC1Q9Y5R8 145 aa8.66□□□□□ -1.02
ITGB4-204ENST00000578318 LINC01549A6NIU2 74 aa8.65□□□□□ -1.02
ITGB4-204ENST00000578318 NUPR1O60356 82 aa8.65□□□□□ -1.02
ITGB4-204ENST00000578318 ZNF861PO60384 105 aa8.65□□□□□ -1.02
ITGB4-204ENST00000578318 C6orf226Q5I0X4 101 aa8.65□□□□□ -1.02
ITGB4-204ENST00000578318 YPEL4Q96NS1 127 aa8.65□□□□□ -1.02
ITGB4-204ENST00000578318 SMCO4Q9NRQ5 59 aa8.65□□□□□ -1.02
ITGB4-204ENST00000578318 LBHQ53QV2 105 aaPredicted RBP8.64□□□□□ -1.03
ITGB4-204ENST00000578318 LINC00469Q8N7U9 141 aa8.64□□□□□ -1.03
ITGB4-204ENST00000578318 C18orf32Q8TCD1 76 aa8.64□□□□□ -1.03
ITGB4-204ENST00000578318 C22orf24Q9Y442 160 aa8.64□□□□□ -1.03
ITGB4-204ENST00000578318 HERVK_113P63121 156 aa8.63□□□□□ -1.03
ITGB4-204ENST00000578318 SEC11AP67812 179 aa8.63□□□□□ -1.03
ITGB4-204ENST00000578318 PRR4Q16378 134 aa8.63□□□□□ -1.03
ITGB4-204ENST00000578318 URB1-AS1Q96HZ7 61 aa8.63□□□□□ -1.03
ITGB4-204ENST00000578318 CDKN2A-AS1Q9UH64 79 aa8.63□□□□□ -1.03
ITGB4-204ENST00000578318 GEMIN7Q9H840 131 aaKnown RBP8.62□□□□□ -1.03
ITGB4-204ENST00000578318 XAGE1AQ9HD64 81 aa8.62□□□□□ -1.03
ITGB4-204ENST00000578318 A0A096LNJ9 63 aa8.61□□□□□ -1.03
ITGB4-204ENST00000578318 F8VRH5 84 aa8.61□□□□□ -1.03
ITGB4-204ENST00000578318 CST9LQ9H4G1 147 aa8.61□□□□□ -1.03
ITGB4-204ENST00000578318 TP73-AS1Q9UF72 201 aa8.61□□□□□ -1.03
ITGB4-204ENST00000578318 TINCRA0A1B0GVN0 87 aa8.6□□□□□ -1.03
ITGB4-204ENST00000578318 LINC00614P0C842 121 aa8.6□□□□□ -1.03
ITGB4-204ENST00000578318 CXCL5P42830 114 aa8.6□□□□□ -1.03
ITGB4-204ENST00000578318 IGLV5-45A0A087WSX0 123 aa8.59□□□□□ -1.03
ITGB4-204ENST00000578318 PMVKQ15126 192 aa8.59□□□□□ -1.03
ITGB4-204ENST00000578318 MRPL55Q7Z7F7 128 aaKnown RBP8.59□□□□□ -1.03
ITGB4-204ENST00000578318 CBLN2Q8IUK8 224 aa8.59□□□□□ -1.03
ITGB4-204ENST00000578318 SLC7A5P1Q8MH63 180 aa8.59□□□□□ -1.03
ITGB4-204ENST00000578318 RPL28P46779 137 aaKnown RBP8.58□□□□□ -1.04
ITGB4-204ENST00000578318 SMIM1B2RUZ4 78 aa8.57□□□□□ -1.04
ITGB4-204ENST00000578318 BCE1O60756 84 aa8.57□□□□□ -1.04
ITGB4-204ENST00000578318 HBDP02042 147 aa8.57□□□□□ -1.04
ITGB4-204ENST00000578318 RAB5BP61020 215 aa8.57□□□□□ -1.04
ITGB4-204ENST00000578318 PMCHL1Q16048 86 aa8.57□□□□□ -1.04
ITGB4-204ENST00000578318 PDZD11Q5EBL8 140 aa8.56□□□□□ -1.04
ITGB4-204ENST00000578318 MUC2Q02817 5179 aa8.55□□□□□ -1.04
ITGB4-204ENST00000578318 A0A087X002 238 aa8.54□□□□□ -1.04
ITGB4-204ENST00000578318 TSPAN13O95857 204 aa8.54□□□□□ -1.04
ITGB4-204ENST00000578318 IGLC3P0DOY3 106 aa8.54□□□□□ -1.04
ITGB4-204ENST00000578318 COX7B2Q8TF08 81 aa8.54□□□□□ -1.04
ITGB4-204ENST00000578318 LINC00167Q96N53 147 aa8.54□□□□□ -1.04
ITGB4-204ENST00000578318 ATP5LO75964 103 aa8.53□□□□□ -1.04
ITGB4-204ENST00000578318 SPINK8P0C7L1 97 aa8.53□□□□□ -1.04
ITGB4-204ENST00000578318 CRYGAP11844 174 aa8.53□□□□□ -1.04
ITGB4-204ENST00000578318 NDUFA6P56556 154 aa8.53□□□□□ -1.04
ITGB4-204ENST00000578318 RPL37AP8A6NKH3 93 aa8.52□□□□□ -1.05
ITGB4-204ENST00000578318 TYMSOSQ8TAI1 123 aa8.52□□□□□ -1.05
ITGB4-204ENST00000578318 CHCHD1Q96BP2 118 aaKnown RBP8.52□□□□□ -1.05
ITGB4-204ENST00000578318 IGLV5-37A0A075B6J1 123 aa8.51□□□□□ -1.05
ITGB4-204ENST00000578318 A0A0U1RQV1 116 aa8.51□□□□□ -1.05
ITGB4-204ENST00000578318 H3BRM9 83 aa8.51□□□□□ -1.05
ITGB4-204ENST00000578318 GAGE10A6NGK3 116 aa8.5□□□□□ -1.05
ITGB4-204ENST00000578318 ZNF22P17026 224 aaPredicted RBP8.5□□□□□ -1.05
ITGB4-204ENST00000578318 NKAPP1Q8N9T2 125 aa8.5□□□□□ -1.05
ITGB4-204ENST00000578318 IGLV5-39A0A0G2JS06 123 aa8.49□□□□□ -1.05
ITGB4-204ENST00000578318 TRGC2P03986 189 aa8.49□□□□□ -1.05
ITGB4-204ENST00000578318 BAGE3Q86Y29 109 aa8.49□□□□□ -1.05
ITGB4-204ENST00000578318 KRTAP13-1Q8IUC0 172 aa8.49□□□□□ -1.05
ITGB4-204ENST00000578318 C11orf86A6NJI1 115 aa8.48□□□□□ -1.05
ITGB4-204ENST00000578318 UBE2AP49459 152 aa8.48□□□□□ -1.05
ITGB4-204ENST00000578318 COLCA2A8K830 154 aa8.47□□□□□ -1.05
ITGB4-204ENST00000578318 LINC00310P59036 64 aa8.46□□□□□ -1.06
ITGB4-204ENST00000578318 FAM229BQ4G0N7 80 aa8.46□□□□□ -1.06
ITGB4-204ENST00000578318 IFI27L1Q96BM0 104 aa8.46□□□□□ -1.06
ITGB4-204ENST00000578318 ANAPC11Q9NYG5 84 aa8.46□□□□□ -1.06
ITGB4-204ENST00000578318 CHTOPQ9Y3Y2 248 aaKnown RBP8.46□□□□□ -1.06
ITGB4-204ENST00000578318 TRAV12-1A0A0B4J245 112 aa8.45□□□□□ -1.06
ITGB4-204ENST00000578318 HSBP1O75506 76 aa8.45□□□□□ -1.06
ITGB4-204ENST00000578318 KRTAP13-2Q52LG2 175 aa8.45□□□□□ -1.06
ITGB4-204ENST00000578318 FAM19A2Q8N3H0 131 aa8.45□□□□□ -1.06
ITGB4-204ENST00000578318 IGKV2-28A0A075B6P5 120 aa8.44□□□□□ -1.06
ITGB4-204ENST00000578318 IGKV2D-28P01615 120 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms