RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 HERV-K104P63124 156 aa3.34□□□□□ -1.87
IFT20-205ENST00000578009 RPL24P83731 157 aaKnown RBP3.34□□□□□ -1.87
IFT20-205ENST00000578009 COX6A2Q02221 97 aa3.34□□□□□ -1.87
IFT20-205ENST00000578009 MRPL23Q16540 153 aaKnown RBP3.34□□□□□ -1.87
IFT20-205ENST00000578009 RNASE13Q5GAN3 156 aaKnown RBP3.34□□□□□ -1.87
IFT20-205ENST00000578009 SFTA2Q6UW10 78 aa3.34□□□□□ -1.87
IFT20-205ENST00000578009 C10orf126Q8N4M7 172 aa3.34□□□□□ -1.87
IFT20-205ENST00000578009 COPS9Q8WXC6 57 aa3.34□□□□□ -1.87
IFT20-205ENST00000578009 LITAFQ99732 161 aa3.34□□□□□ -1.87
IFT20-205ENST00000578009 CHCHD5Q9BSY4 110 aa3.34□□□□□ -1.87
IFT20-205ENST00000578009 C11orf68Q9H3H3 251 aaKnown RBP3.34□□□□□ -1.87
IFT20-205ENST00000578009 TRAV8-3A0A0A6YYJ7 113 aa3.33□□□□□ -1.88
IFT20-205ENST00000578009 TRAV13-1A0A0B4J241 112 aa3.33□□□□□ -1.88
IFT20-205ENST00000578009 IGHV3OR16-9A0A0B4J2B5 98 aa3.33□□□□□ -1.88
IFT20-205ENST00000578009 A0A0B4J2C4 111 aa3.33□□□□□ -1.88
IFT20-205ENST00000578009 A0A1B0GVY2 172 aa3.33□□□□□ -1.88
IFT20-205ENST00000578009 SMIM1B2RUZ4 78 aa3.33□□□□□ -1.88
IFT20-205ENST00000578009 SPINK8P0C7L1 97 aa3.33□□□□□ -1.88
IFT20-205ENST00000578009 GAGE6Q13070 117 aa3.33□□□□□ -1.88
IFT20-205ENST00000578009 CIRBPQ14011 172 aaKnown RBP3.33□□□□□ -1.88
IFT20-205ENST00000578009 LYRM7Q5U5X0 104 aa3.33□□□□□ -1.88
IFT20-205ENST00000578009 RAB37Q96AX2 223 aa3.33□□□□□ -1.88
IFT20-205ENST00000578009 PRO1854Q9UHT4 67 aa3.33□□□□□ -1.88
IFT20-205ENST00000578009 IGLV4-60A0A075B6I1 120 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 A0A087WZ39 114 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 LINC00959A0A1B0GUT2 108 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 CFC1BP0CG36 223 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 CFC1P0CG37 223 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 RBX1P62877 108 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 SS18Q15532 418 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 MIAQ16674 131 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 LELP1Q5T871 98 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 MUSTN1Q8IVN3 82 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 ZNF625Q96I27 306 aaPredicted RBP3.32□□□□□ -1.88
IFT20-205ENST00000578009 SPCS1Q9Y6A9 102 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 ICOSQ9Y6W8 199 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 NBEAL1Q6ZS30 2694 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 PKD1L1Q8TDX9 2849 aa3.32□□□□□ -1.88
IFT20-205ENST00000578009 TRBV20-1A0A075B6N2 111 aa3.31□□□□□ -1.88
IFT20-205ENST00000578009 IGHV3-64A0A075B6Q5 118 aa3.31□□□□□ -1.88
IFT20-205ENST00000578009 A4D1N5 150 aa3.31□□□□□ -1.88
IFT20-205ENST00000578009 F8W1H4 67 aa3.31□□□□□ -1.88
IFT20-205ENST00000578009 K7ERJ3 54 aa3.31□□□□□ -1.88
IFT20-205ENST00000578009 IGHV3-33P01772 117 aa3.31□□□□□ -1.88
IFT20-205ENST00000578009 ADAMTSL4-AS1Q5T5F5 129 aa3.31□□□□□ -1.88
IFT20-205ENST00000578009 COX7B2Q8TF08 81 aa3.31□□□□□ -1.88
IFT20-205ENST00000578009 CELA1Q9UNI1 258 aa3.31□□□□□ -1.88
IFT20-205ENST00000578009 NOTCH1P46531 2555 aa3.31□□□□□ -1.88
IFT20-205ENST00000578009 FBN1P35555 2871 aaKnown RBP3.3□□□□□ -1.88
IFT20-205ENST00000578009 IBA57-AS1B1ANH7 110 aa3.3□□□□□ -1.88
IFT20-205ENST00000578009 TMEM262E9PQX1 116 aa3.3□□□□□ -1.88
IFT20-205ENST00000578009 DEFB4AO15263 64 aa3.3□□□□□ -1.88
IFT20-205ENST00000578009 TSPAN13O95857 204 aa3.3□□□□□ -1.88
IFT20-205ENST00000578009 KPRPQ5T749 579 aaPredicted RBP3.3□□□□□ -1.88
IFT20-205ENST00000578009 CD164L2Q6UWJ8 174 aa3.3□□□□□ -1.88
IFT20-205ENST00000578009 Q9H8V8 135 aa3.3□□□□□ -1.88
IFT20-205ENST00000578009 ERG28Q9UKR5 140 aa3.3□□□□□ -1.88
IFT20-205ENST00000578009 MGAM2Q2M2H8 2515 aa3.3□□□□□ -1.88
IFT20-205ENST00000578009 A0A096LPF7 62 aa3.29□□□□□ -1.88
IFT20-205ENST00000578009 TRBV30A0A0K0K1B3 111 aa3.29□□□□□ -1.88
IFT20-205ENST00000578009 APOMO95445 188 aa3.29□□□□□ -1.88
IFT20-205ENST00000578009 CXCL5P42830 114 aa3.29□□□□□ -1.88
IFT20-205ENST00000578009 LYPD5Q6UWN5 251 aa3.29□□□□□ -1.88
IFT20-205ENST00000578009 MUC7Q8TAX7 377 aa3.29□□□□□ -1.88
IFT20-205ENST00000578009 LINC00308Q8TCZ7 52 aa3.29□□□□□ -1.88
IFT20-205ENST00000578009 LINC01600Q96MT4 127 aa3.29□□□□□ -1.88
IFT20-205ENST00000578009 NAA38Q9BRA0 125 aaKnown RBP3.29□□□□□ -1.88
IFT20-205ENST00000578009 PRR34Q9NV39 138 aa3.29□□□□□ -1.88
IFT20-205ENST00000578009 KLK5Q9Y337 293 aaPredicted RBP3.29□□□□□ -1.88
IFT20-205ENST00000578009 CUBNO60494 3623 aa3.29□□□□□ -1.88
IFT20-205ENST00000578009 TRAV8-4A0A0B4J246 113 aa3.28□□□□□ -1.88
IFT20-205ENST00000578009 LOC107984156A0A0G2JMH3 177 aa3.28□□□□□ -1.88
IFT20-205ENST00000578009 G3V4G9 280 aa3.28□□□□□ -1.88
IFT20-205ENST00000578009 K7ERU9 68 aa3.28□□□□□ -1.88
IFT20-205ENST00000578009 M0QXV9 152 aa3.28□□□□□ -1.88
IFT20-205ENST00000578009 COX7A2LO14548 114 aa3.28□□□□□ -1.88
IFT20-205ENST00000578009 OCIAD2Q56VL3 154 aa3.28□□□□□ -1.88
IFT20-205ENST00000578009 C6orf226Q5I0X4 101 aa3.28□□□□□ -1.88
IFT20-205ENST00000578009 MEIG1Q5JSS6 88 aa3.28□□□□□ -1.88
IFT20-205ENST00000578009 ARL17AQ8IVW1 177 aa3.28□□□□□ -1.88
IFT20-205ENST00000578009 Q8IZM0 81 aa3.28□□□□□ -1.88
IFT20-205ENST00000578009 LINC00269Q8N2A0 174 aa3.28□□□□□ -1.88
IFT20-205ENST00000578009 H3BMG7 143 aa3.27□□□□□ -1.89
IFT20-205ENST00000578009 ANGP03950 147 aaKnown RBP3.27□□□□□ -1.89
IFT20-205ENST00000578009 COX6CP09669 75 aa3.27□□□□□ -1.89
IFT20-205ENST00000578009 HTN3P15516 51 aa3.27□□□□□ -1.89
IFT20-205ENST00000578009 REG3AQ06141 175 aa3.27□□□□□ -1.89
IFT20-205ENST00000578009 COX17Q14061 63 aa3.27□□□□□ -1.89
IFT20-205ENST00000578009 C5orf38Q86SI9 138 aa3.27□□□□□ -1.89
IFT20-205ENST00000578009 C11orf45Q8TAV5 145 aa3.27□□□□□ -1.89
IFT20-205ENST00000578009 CHCHD10Q8WYQ3 142 aaPredicted RBP3.27□□□□□ -1.89
IFT20-205ENST00000578009 TM2D3Q9BRN9 247 aa3.27□□□□□ -1.89
IFT20-205ENST00000578009 PRO0461Q9UI25 63 aa3.27□□□□□ -1.89
IFT20-205ENST00000578009 DEFB131BA0A096LNP1 70 aa3.26□□□□□ -1.89
IFT20-205ENST00000578009 TRAV13-2A0A0B4J235 113 aa3.26□□□□□ -1.89
IFT20-205ENST00000578009 IGKV3OR2-268A0A0C4DH90 116 aa3.26□□□□□ -1.89
IFT20-205ENST00000578009 F8WDY8 70 aa3.26□□□□□ -1.89
IFT20-205ENST00000578009 SCGB1C2P0DMR2 95 aa3.26□□□□□ -1.89
IFT20-205ENST00000578009 XCL1P47992 114 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms