RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 ATP7BP35670 1465 aa1.06□□□□□ -2.24
TOP2A-203ENST00000577706 KDM3BQ7LBC6 1761 aa1.06□□□□□ -2.24
TOP2A-203ENST00000577706 SLIT1O75093 1534 aa1.06□□□□□ -2.24
TOP2A-203ENST00000577706 PRRC2BQ5JSZ5 2229 aaKnown RBP1.06□□□□□ -2.24
TOP2A-203ENST00000577706 TRAV21A0A0B4J279 112 aa1.06□□□□□ -2.24
TOP2A-203ENST00000577706 A0A1B0GU69 56 aa1.06□□□□□ -2.24
TOP2A-203ENST00000577706 LINC00959A0A1B0GUT2 108 aa1.06□□□□□ -2.24
TOP2A-203ENST00000577706 DEFB112Q30KQ8 113 aa1.06□□□□□ -2.24
TOP2A-203ENST00000577706 LINC00846Q9NV44 126 aa1.06□□□□□ -2.24
TOP2A-203ENST00000577706 CRIPTQ9P021 101 aa1.06□□□□□ -2.24
TOP2A-203ENST00000577706 MYH4Q9Y623 1939 aa1.06□□□□□ -2.24
TOP2A-203ENST00000577706 MED12Q93074 2177 aa1.06□□□□□ -2.24
TOP2A-203ENST00000577706 EFCAB5A4FU69 1503 aa1.05□□□□□ -2.24
TOP2A-203ENST00000577706 LRRC7Q96NW7 1537 aa1.05□□□□□ -2.24
TOP2A-203ENST00000577706 TCHHQ07283 1943 aa1.05□□□□□ -2.24
TOP2A-203ENST00000577706 THOC2Q8NI27 1593 aaKnown RBP1.05□□□□□ -2.24
TOP2A-203ENST00000577706 PTPN23Q9H3S7 1636 aa1.05□□□□□ -2.24
TOP2A-203ENST00000577706 DOCK11Q5JSL3 2073 aa1.05□□□□□ -2.24
TOP2A-203ENST00000577706 FXYD6-FXYD2A0A087WZ82 144 aa1.05□□□□□ -2.24
TOP2A-203ENST00000577706 A0A1B0GUT8 65 aa1.05□□□□□ -2.24
TOP2A-203ENST00000577706 SFTA3P0C7M3 94 aa1.05□□□□□ -2.24
TOP2A-203ENST00000577706 IFI27P40305 119 aaPredicted RBP1.05□□□□□ -2.24
TOP2A-203ENST00000577706 ITSN1Q15811 1721 aa1.05□□□□□ -2.24
TOP2A-203ENST00000577706 SDK1Q7Z5N4 2213 aa1.05□□□□□ -2.24
TOP2A-203ENST00000577706 LRRC9Q6ZRR7 1453 aa1.05□□□□□ -2.24
TOP2A-203ENST00000577706 NINQ8N4C6 2090 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 CDC42BPGQ6DT37 1551 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 SPTBP11277 2137 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 PIK3C2BO00750 1634 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 NESP48681 1621 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 TARBP1Q13395 1621 aaKnown RBP1.04□□□□□ -2.24
TOP2A-203ENST00000577706 ABCA9Q8IUA7 1624 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 ALKQ9UM73 1620 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 CACNA1BQ00975 2339 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 ARFGEF2Q9Y6D5 1785 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 TRBV6-1A0A0K0K1D8 114 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 C3orf79P0CE67 100 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 COX8AP10176 69 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 WFDC9Q8NEX5 89 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 RALGAPBQ86X10 1494 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 CD163L1Q9NR16 1453 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 DIP2AQ14689 1571 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 C5P01031 1676 aa1.04□□□□□ -2.24
TOP2A-203ENST00000577706 RGPD1P0DJD0 1748 aa1.03□□□□□ -2.24
TOP2A-203ENST00000577706 PDCD11Q14690 1871 aaKnown RBP1.03□□□□□ -2.24
TOP2A-203ENST00000577706 HMGA1P17096 107 aaKnown RBP1.03□□□□□ -2.24
TOP2A-203ENST00000577706 SPINK13Q1W4C9 94 aa1.03□□□□□ -2.24
TOP2A-203ENST00000577706 GNG13Q9P2W3 67 aa1.03□□□□□ -2.24
TOP2A-203ENST00000577706 SAMD9Q5K651 1589 aa1.03□□□□□ -2.24
TOP2A-203ENST00000577706 LAMC1P11047 1609 aa1.03□□□□□ -2.24
TOP2A-203ENST00000577706 SHPRHQ149N8 1683 aa1.03□□□□□ -2.24
TOP2A-203ENST00000577706 PAPPA2Q9BXP8 1791 aa1.03□□□□□ -2.24
TOP2A-203ENST00000577706 A0A087WWC5 75 aa1.02□□□□□ -2.25
TOP2A-203ENST00000577706 K7EIL1 84 aa1.02□□□□□ -2.25
TOP2A-203ENST00000577706 RGPD2P0DJD1 1756 aa1.02□□□□□ -2.25
TOP2A-203ENST00000577706 NKTRP30414 1462 aaKnown RBP1.02□□□□□ -2.25
TOP2A-203ENST00000577706 NREPQ16612 68 aa1.02□□□□□ -2.25
TOP2A-203ENST00000577706 ATP5EP2Q5VTU8 51 aa1.02□□□□□ -2.25
TOP2A-203ENST00000577706 Q6ZSA8 131 aa1.02□□□□□ -2.25
TOP2A-203ENST00000577706 LMTK2Q8IWU2 1503 aa1.02□□□□□ -2.25
TOP2A-203ENST00000577706 RAPGEF6Q8TEU7 1601 aa1.02□□□□□ -2.25
TOP2A-203ENST00000577706 GAFA1Q96PS6 74 aa1.02□□□□□ -2.25
TOP2A-203ENST00000577706 KIF20BQ96Q89 1820 aa1.02□□□□□ -2.25
TOP2A-203ENST00000577706 KIAA0100Q14667 2235 aaKnown RBP1.01□□□□□ -2.25
TOP2A-203ENST00000577706 MYO7BQ6PIF6 2116 aa1.01□□□□□ -2.25
TOP2A-203ENST00000577706 SCN11AQ9UI33 1791 aa1.01□□□□□ -2.25
TOP2A-203ENST00000577706 CRYBG1Q9Y4K1 1723 aa1.01□□□□□ -2.25
TOP2A-203ENST00000577706 UBE2DNLQ8IWF7 75 aa1.01□□□□□ -2.25
TOP2A-203ENST00000577706 FAM103A1Q9BTL3 118 aaKnown RBP1.01□□□□□ -2.25
TOP2A-203ENST00000577706 RTTNQ86VV8 2226 aa1.01□□□□□ -2.25
TOP2A-203ENST00000577706 FMN2Q9NZ56 1722 aa1.01□□□□□ -2.25
TOP2A-203ENST00000577706 ERCC6L2Q5T890 1561 aa1□□□□□ -2.25
TOP2A-203ENST00000577706 URB2Q14146 1524 aaKnown RBP1□□□□□ -2.25
TOP2A-203ENST00000577706 A0A0D9SFI3 127 aa1□□□□□ -2.25
TOP2A-203ENST00000577706 KRTAP10-4P60372 401 aaPredicted RBP1□□□□□ -2.25
TOP2A-203ENST00000577706 C10orf95Q9H7T3 257 aa1□□□□□ -2.25
TOP2A-203ENST00000577706 SPAG17Q6Q759 2223 aa1□□□□□ -2.25
TOP2A-203ENST00000577706 PAPPAQ13219 1627 aa1□□□□□ -2.25
TOP2A-203ENST00000577706 PI4KAP42356 2102 aa1□□□□□ -2.25
TOP2A-203ENST00000577706 LRRC37A2A6NM11 1700 aa0.99□□□□□ -2.25
TOP2A-203ENST00000577706 XRN1Q8IZH2 1706 aaKnown RBP0.99□□□□□ -2.25
TOP2A-203ENST00000577706 GLI2P10070 1586 aa0.99□□□□□ -2.25
TOP2A-203ENST00000577706 INTS1Q8N201 2190 aaKnown RBP0.98□□□□□ -2.25
TOP2A-203ENST00000577706 PKD1L3Q7Z443 1732 aa0.98□□□□□ -2.25
TOP2A-203ENST00000577706 MAP2P11137 1827 aaKnown RBP0.98□□□□□ -2.25
TOP2A-203ENST00000577706 RGPD8O14715 1765 aaPredicted RBP0.98□□□□□ -2.25
TOP2A-203ENST00000577706 RGPD5Q99666 1765 aa0.98□□□□□ -2.25
TOP2A-203ENST00000577706 CCDC180Q9P1Z9 1646 aa0.97□□□□□ -2.25
TOP2A-203ENST00000577706 K7EMI3 77 aa0.97□□□□□ -2.25
TOP2A-203ENST00000577706 COX7BP24311 80 aa0.97□□□□□ -2.25
TOP2A-203ENST00000577706 ATXN8Q156A1 80 aa0.97□□□□□ -2.25
TOP2A-203ENST00000577706 KRTAP21-3Q3LHN1 58 aa0.97□□□□□ -2.25
TOP2A-203ENST00000577706 ABCA1O95477 2261 aa0.97□□□□□ -2.25
TOP2A-203ENST00000577706 KIAA0556O60303 1618 aa0.97□□□□□ -2.25
TOP2A-203ENST00000577706 F5P12259 2224 aa0.96□□□□□ -2.26
TOP2A-203ENST00000577706 MED13LQ71F56 2210 aa0.96□□□□□ -2.26
TOP2A-203ENST00000577706 LINC01549A6NIU2 74 aa0.96□□□□□ -2.26
TOP2A-203ENST00000577706 I3L2K1 104 aa0.96□□□□□ -2.26
TOP2A-203ENST00000577706 ENHOQ6UWT2 76 aa0.96□□□□□ -2.26
TOP2A-203ENST00000577706 PRXQ9BXM0 1461 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms