RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 TMEM170BQ5T4T1 132 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 C20orf203Q8NBC4 194 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 LYSTQ99698 3801 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 ALMS1Q8TCU4 4167 aa5.8□□□□□ -1.48
PRPF8-213ENST00000576407 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.79□□□□□ -1.48
PRPF8-213ENST00000576407 TRAV8-4A0A0B4J246 113 aa5.79□□□□□ -1.48
PRPF8-213ENST00000576407 A0A0B4J2C4 111 aa5.79□□□□□ -1.48
PRPF8-213ENST00000576407 SLC25A20O43772 301 aa5.79□□□□□ -1.48
PRPF8-213ENST00000576407 RPL39P62891 51 aaKnown RBP5.79□□□□□ -1.48
PRPF8-213ENST00000576407 PMVKQ15126 192 aa5.79□□□□□ -1.48
PRPF8-213ENST00000576407 ATXN8Q156A1 80 aa5.79□□□□□ -1.48
PRPF8-213ENST00000576407 ANKRD29Q8N6D5 301 aa5.79□□□□□ -1.48
PRPF8-213ENST00000576407 CSDC2Q9Y534 153 aaKnown RBP5.79□□□□□ -1.48
PRPF8-213ENST00000576407 A0A1B0GUV1 79 aa5.78□□□□□ -1.48
PRPF8-213ENST00000576407 CXCL5P42830 114 aa5.78□□□□□ -1.48
PRPF8-213ENST00000576407 PSMB2P49721 201 aa5.78□□□□□ -1.48
PRPF8-213ENST00000576407 KRTAP1-5Q9BYS1 174 aa5.78□□□□□ -1.48
PRPF8-213ENST00000576407 PRO1854Q9UHT4 67 aa5.78□□□□□ -1.48
PRPF8-213ENST00000576407 UBE2D4Q9Y2X8 147 aa5.78□□□□□ -1.48
PRPF8-213ENST00000576407 KMT2CQ8NEZ4 4911 aaKnown RBP5.78□□□□□ -1.48
PRPF8-213ENST00000576407 IGLV4-60A0A075B6I1 120 aa5.77□□□□□ -1.49
PRPF8-213ENST00000576407 LOC107984156A0A0G2JMH3 177 aa5.77□□□□□ -1.49
PRPF8-213ENST00000576407 NBDYA0A0U1RRE5 68 aa5.77□□□□□ -1.49
PRPF8-213ENST00000576407 CCDC179H3BU77 68 aa5.77□□□□□ -1.49
PRPF8-213ENST00000576407 M0R2N4 97 aa5.77□□□□□ -1.49
PRPF8-213ENST00000576407 ANGP03950 147 aaKnown RBP5.77□□□□□ -1.49
PRPF8-213ENST00000576407 C2orf66Q6UXQ4 117 aa5.77□□□□□ -1.49
PRPF8-213ENST00000576407 ARL17AQ8IVW1 177 aa5.77□□□□□ -1.49
PRPF8-213ENST00000576407 LINC00526Q96FQ7 95 aa5.77□□□□□ -1.49
PRPF8-213ENST00000576407 TIMM21Q9BVV7 248 aa5.77□□□□□ -1.49
PRPF8-213ENST00000576407 MRPL35Q9NZE8 188 aaKnown RBP5.77□□□□□ -1.49
PRPF8-213ENST00000576407 KLK12Q9UKR0 248 aa5.77□□□□□ -1.49
PRPF8-213ENST00000576407 SACSQ9NZJ4 4579 aa5.76□□□□□ -1.49
PRPF8-213ENST00000576407 TRBV10-2A0A0K0K1G8 114 aa5.76□□□□□ -1.49
PRPF8-213ENST00000576407 IBA57-AS1B1ANH7 110 aa5.76□□□□□ -1.49
PRPF8-213ENST00000576407 SRSF9Q13242 221 aaKnown RBP eCLIP5.76□□□□□ -1.49
PRPF8-213ENST00000576407 DGAT2L7PQ6IED9 249 aa5.76□□□□□ -1.49
PRPF8-213ENST00000576407 Q6ZR54 194 aa5.76□□□□□ -1.49
PRPF8-213ENST00000576407 LINC00269Q8N2A0 174 aa5.76□□□□□ -1.49
PRPF8-213ENST00000576407 TOMM6Q96B49 74 aa5.76□□□□□ -1.49
PRPF8-213ENST00000576407 HYDINQ4G0P3 5121 aa5.75□□□□□ -1.49
PRPF8-213ENST00000576407 TRBV30A0A0K0K1B3 111 aa5.75□□□□□ -1.49
PRPF8-213ENST00000576407 IGIPA6NJ69 53 aa5.75□□□□□ -1.49
PRPF8-213ENST00000576407 TCL1BO95988 128 aa5.75□□□□□ -1.49
PRPF8-213ENST00000576407 SCGB1D4Q6XE38 83 aa5.75□□□□□ -1.49
PRPF8-213ENST00000576407 C3orf22Q8N5N4 141 aa5.75□□□□□ -1.49
PRPF8-213ENST00000576407 FAM104AQ969W3 186 aa5.75□□□□□ -1.49
PRPF8-213ENST00000576407 UBE2WQ96B02 151 aa5.75□□□□□ -1.49
PRPF8-213ENST00000576407 OPRPNQ99935 248 aaPredicted RBP5.75□□□□□ -1.49
PRPF8-213ENST00000576407 CDC42SE2Q9NRR3 84 aa5.75□□□□□ -1.49
PRPF8-213ENST00000576407 PRR34Q9NV39 138 aa5.75□□□□□ -1.49
PRPF8-213ENST00000576407 PYGO1Q9Y3Y4 419 aa5.75□□□□□ -1.49
PRPF8-213ENST00000576407 IGLV4-3A0A075B6K6 122 aa5.74□□□□□ -1.49
PRPF8-213ENST00000576407 COX6CP09669 75 aa5.74□□□□□ -1.49
PRPF8-213ENST00000576407 CRYGAP11844 174 aa5.74□□□□□ -1.49
PRPF8-213ENST00000576407 MRPS36P82909 103 aaKnown RBP5.74□□□□□ -1.49
PRPF8-213ENST00000576407 RNASE13Q5GAN3 156 aaKnown RBP5.74□□□□□ -1.49
PRPF8-213ENST00000576407 CLPSL2Q6UWE3 100 aa5.74□□□□□ -1.49
PRPF8-213ENST00000576407 ENHOQ6UWT2 76 aa5.74□□□□□ -1.49
PRPF8-213ENST00000576407 MAPKAPK5-AS1Q8N8E1 139 aa5.74□□□□□ -1.49
PRPF8-213ENST00000576407 SCGB3A1Q96QR1 104 aa5.74□□□□□ -1.49
PRPF8-213ENST00000576407 RYR2Q92736 4967 aa5.73□□□□□ -1.49
PRPF8-213ENST00000576407 IGKV3OR2-268A0A0C4DH90 116 aa5.73□□□□□ -1.49
PRPF8-213ENST00000576407 ZNF815PA8K554 130 aa5.73□□□□□ -1.49
PRPF8-213ENST00000576407 J3QL48 77 aa5.73□□□□□ -1.49
PRPF8-213ENST00000576407 CRPP02741 224 aa5.73□□□□□ -1.49
PRPF8-213ENST00000576407 TMEM258P61165 79 aa5.73□□□□□ -1.49
PRPF8-213ENST00000576407 REG3AQ06141 175 aa5.73□□□□□ -1.49
PRPF8-213ENST00000576407 LINC00643Q86TS7 51 aa5.73□□□□□ -1.49
PRPF8-213ENST00000576407 TMEM141Q96I45 108 aa5.73□□□□□ -1.49
PRPF8-213ENST00000576407 TIMM17AQ99595 171 aa5.73□□□□□ -1.49
PRPF8-213ENST00000576407 Q9HAA7 133 aa5.73□□□□□ -1.49
PRPF8-213ENST00000576407 TRAV8-3A0A0A6YYJ7 113 aa5.72□□□□□ -1.49
PRPF8-213ENST00000576407 C11orf86A6NJI1 115 aa5.72□□□□□ -1.49
PRPF8-213ENST00000576407 CFC1BP0CG36 223 aa5.72□□□□□ -1.49
PRPF8-213ENST00000576407 CFC1P0CG37 223 aa5.72□□□□□ -1.49
PRPF8-213ENST00000576407 MIAQ16674 131 aa5.72□□□□□ -1.49
PRPF8-213ENST00000576407 LINC01620Q4KN68 170 aa5.72□□□□□ -1.49
PRPF8-213ENST00000576407 C9orf153Q5TBE3 101 aa5.72□□□□□ -1.49
PRPF8-213ENST00000576407 BAALCQ8WXS3 180 aa5.72□□□□□ -1.49
PRPF8-213ENST00000576407 RYR3Q15413 4870 aa5.71□□□□□ -1.49
PRPF8-213ENST00000576407 IGLV10-54A0A075B6I4 117 aa5.71□□□□□ -1.5
PRPF8-213ENST00000576407 C9JAW5 83 aa5.71□□□□□ -1.5
PRPF8-213ENST00000576407 NDUFC2-KCTD14E9PQ53 114 aa5.71□□□□□ -1.5
PRPF8-213ENST00000576407 ATOX1O00244 68 aa5.71□□□□□ -1.5
PRPF8-213ENST00000576407 C1orf134Q5TEV5 83 aa5.71□□□□□ -1.5
PRPF8-213ENST00000576407 C6orf223Q8N319 242 aa5.71□□□□□ -1.5
PRPF8-213ENST00000576407 AMELXQ99217 191 aa5.71□□□□□ -1.5
PRPF8-213ENST00000576407 DNAH6Q9C0G6 4158 aa5.71□□□□□ -1.5
PRPF8-213ENST00000576407 KMT2AQ03164 3969 aa5.7□□□□□ -1.5
PRPF8-213ENST00000576407 IGKV2D-24A0A075B6R9 120 aa5.7□□□□□ -1.5
PRPF8-213ENST00000576407 TRAV13-1A0A0B4J241 112 aa5.7□□□□□ -1.5
PRPF8-213ENST00000576407 LINC00959A0A1B0GUT2 108 aa5.7□□□□□ -1.5
PRPF8-213ENST00000576407 COX7CP15954 63 aa5.7□□□□□ -1.5
PRPF8-213ENST00000576407 SDIM1Q6ZPB5 146 aa5.7□□□□□ -1.5
PRPF8-213ENST00000576407 Q6ZRN7 208 aaPredicted RBP5.7□□□□□ -1.5
PRPF8-213ENST00000576407 RMI2Q96E14 147 aa5.7□□□□□ -1.5
PRPF8-213ENST00000576407 C1orf43Q9BWL3 253 aa5.7□□□□□ -1.5
PRPF8-213ENST00000576407 PPDPFQ9H3Y8 114 aa5.7□□□□□ -1.5
PRPF8-213ENST00000576407 SS18Q15532 418 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms